Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p001278 Quercus lobata HOM05D004360 ORTHO05D005195 6.9e-96 354.0 181 100.0
GSVIVG01037160001 Vitis vinifera HOM05D004360 ORTHO05D005195 6.7e-75 284.3 179 78.2
Lj3g0027106 Lotus japonicus HOM05D004360 ORTHO05D005195 5.7e-74 281.2 182 75.8
CSS0027083 Camellia sinensis var. sinensis HOM05D004360 ORTHO05D005195 7.4e-74 280.8 177 79.1
TPR.G25525 Trifolium pratense HOM05D004360 ORTHO05D005195 1.3e-73 280.0 173 78.6
Hma1.2p1_0016F.1_g010960 Hydrangea macrophylla HOM05D004360 ORTHO05D005195 1.7e-73 279.6 178 77.0
Lalb_Chr18g0048451 Lupinus albus HOM05D004360 ORTHO05D005195 8.2e-73 277.3 177 78.0
Psat5g232320 Pisum sativum HOM05D004360 ORTHO05D005195 1.8e-72 276.2 178 76.4
Nn5g27232 Nelumbo nucifera HOM05D004360 ORTHO05D005195 2.4e-72 275.8 179 76.0
Glyma.06G323900 Glycine max HOM05D004360 ORTHO05D005195 4.1e-72 275.0 173 78.6
Potri.003G048300 Populus trichocarpa HOM05D004360 ORTHO05D005195 4.1e-72 275.0 183 76.0
Medtr3g006190 Medicago truncatula HOM05D004360 ORTHO05D005195 5.3e-72 274.6 179 76.0
Manes.02G202700 Manihot esculenta HOM05D004360 ORTHO05D005195 9.1e-72 273.9 181 74.0
Oeu020627.1 Olea europaea HOM05D004360 ORTHO05D005195 1.5e-71 273.1 175 76.6
Glyma.04G110500 Glycine max HOM05D004360 ORTHO05D005195 4.5e-71 271.6 173 78.0
Actinidia01542 Actinidia chinensis HOM05D004360 ORTHO05D005195 5.9e-71 271.2 179 76.0
TAR628G1251 Trochodendron aralioides HOM05D004360 ORTHO05D005195 5.9e-71 271.2 180 73.3
Oeu028624.1 Olea europaea HOM05D004360 ORTHO05D005195 7.7e-71 270.8 196 69.9
CsaV3_2G033320 Cucumis sativus L. HOM05D004360 ORTHO05D005195 1.3e-70 270.0 173 76.3
Cc10_g16090 Coffea canephora HOM05D004360 ORTHO05D005195 2.2e-70 269.2 179 75.4
COL.COLO4_25070 Corchorus olitorius HOM05D004360 ORTHO05D005195 6.5e-70 267.7 178 76.4
PGR083G1110 Punica granatum HOM05D004360 ORTHO05D005195 6.5e-70 267.7 173 75.1
Potri.013G095200 Populus trichocarpa HOM05D004360 ORTHO05D005195 8.5e-70 267.3 178 74.7
Thecc.08G168700 Theobroma cacao HOM05D004360 ORTHO05D005195 8.5e-70 267.3 174 77.0
CANSAT56G1596 Cannabis sativa HOM05D004360 ORTHO05D005195 1.4e-69 266.5 180 75.0
MELO3C008103.2 Cucumis melo HOM05D004360 ORTHO05D005195 1.9e-69 266.2 173 75.7
PSO761G0584 Papaver somniferum HOM05D004360 ORTHO05D005195 2.5e-69 265.8 174 74.7
SGA_v2.0_scaffold118G32638 Striga asiatica HOM05D004360 ORTHO05D005195 3.2e-69 265.4 187 73.8
Gohir.A05G248500 Gossypium hirsutum HOM05D004360 ORTHO05D005195 4.2e-69 265.0 178 75.3
TWI12G0674 Tripterygium wilfordii HOM05D004360 ORTHO05D005195 4.2e-69 265.0 180 74.4
arahy.Tifrunner.gnm1.ann1.4Y3JNF Arachis hypogaea HOM05D004360 ORTHO05D005195 7.2e-69 264.2 174 77.0
Gohir.D05G250900 Gossypium hirsutum HOM05D004360 ORTHO05D005195 1.2e-68 263.5 178 74.7
Gorai.009G262300 Gossypium raimondii HOM05D004360 ORTHO05D005195 1.2e-68 263.5 178 74.7
Phvul.005G002300 Phaseolus vulgaris HOM05D004360 ORTHO05D005195 2.1e-68 262.7 169 76.3
DCAR_014061 Daucus carota HOM05D004360 ORTHO05D005195 4.7e-68 261.5 173 72.8
Duzib116G0053 Durio zibethinus HOM05D004360 ORTHO05D005195 4.7e-68 261.5 178 75.3
MBI03_g07140_MAGBIO Magnolia biondii HOM05D004360 ORTHO05D005195 6.1e-68 261.2 181 70.7
Manes.18G109100 Manihot esculenta HOM05D004360 ORTHO05D005195 6.1e-68 261.2 181 72.4
CDE08G1539 Ceratophyllum demersum HOM05D004360 ORTHO05D005195 8.0e-68 260.8 179 72.6
Hund16918 Selenicereus undatus HOM05D004360 ORTHO05D005195 8.0e-68 260.8 181 69.6
Eucgr.F04085 Eucalyptus grandis HOM05D004360 ORTHO05D005195 1.0e-67 260.4 176 72.7
HPP92_001197 Vanilla planifolia HOM05D004360 ORTHO05D005195 1.4e-67 260.0 176 69.3
PSO210G5265 Papaver somniferum HOM05D004360 ORTHO05D005195 1.8e-67 259.6 171 73.7
AUR62038546 Chenopodium quinoa HOM05D004360 ORTHO05D005195 6.7e-67 257.7 175 73.7
AUR62013395 Chenopodium quinoa HOM05D004360 ORTHO05D005195 8.8e-67 257.3 175 73.7
Atru.chr13.2581 Acer truncatum HOM05D004360 ORTHO05D005195 1.5e-66 256.5 178 69.7
MD05G1006100 Malus domestica HOM05D004360 ORTHO05D005195 2.0e-66 256.1 172 74.4
Lj7A416T39 Lonicera japonica HOM05D004360 ORTHO05D005195 5.7e-66 254.6 163 78.5
ClCG11G008280 Citrullus lanatus HOM05D004360 ORTHO05D005195 7.4e-66 254.2 169 74.6
Ciclev10022474m.g Citrus clementina HOM05D004360 ORTHO05D005195 9.7e-66 253.8 174 72.4
VMungo1080G0197 Vigna mungo HOM05D004360 ORTHO05D005195 9.7e-66 253.8 173 75.1
MSTRG.1609 Avicennia marina HOM05D004360 ORTHO05D005195 1.3e-65 253.4 186 71.0
Prupe.8G003400 Prunus persica HOM05D004360 ORTHO05D005195 1.7e-65 253.1 177 74.6
THA.LOC104806751 Tarenaya hassleriana HOM05D004360 ORTHO05D005195 1.7e-65 253.1 180 70.6
AUR62038559 Chenopodium quinoa HOM05D004360 ORTHO05D005195 2.8e-65 252.3 176 71.6
Sed0011254 Sechium edule HOM05D004360 ORTHO05D005195 2.8e-65 252.3 172 72.7
Nitab4.5_0007335g0050 Nicotiana tabacum HOM05D004360 ORTHO05D005195 1.4e-64 250.0 173 73.4
Aqoxy5G01853 Aquilegia oxysepala HOM05D004360 ORTHO05D005195 3.1e-64 248.8 174 70.1
ATR1089G020 Amborella trichopoda HOM05D004360 ORTHO05D005195 5.3e-64 248.1 181 66.3
Actinidia29366 Actinidia chinensis HOM05D004360 ORTHO05D005195 7.0e-64 247.7 206 61.2
PGSC0003DMG400033136 Solanum tuberosum HOM05D004360 ORTHO05D005195 3.5e-63 245.4 175 69.7
Peaxi162Scf00818g00320 Petunia axillaris HOM05D004360 ORTHO05D005195 4.5e-63 245.0 174 71.3
Lalb_Chr01g0008181 Lupinus albus HOM05D004360 ORTHO05D005195 5.9e-63 244.6 179 67.6
Solyc11g045030.2 Solanum lycopersicum HOM05D004360 ORTHO05D005195 5.9e-63 244.6 192 65.1
A09p32780 Brassica napus HOM05D004360 ORTHO05D005195 1.0e-62 243.8 177 68.4
BraA09t38813Z Brassica rapa HOM05D004360 ORTHO05D005195 1.0e-62 243.8 177 68.4
MD10G1002100 Malus domestica HOM05D004360 ORTHO05D005195 1.0e-62 243.8 169 72.8
Nitab4.5_0007657g0070 Nicotiana tabacum HOM05D004360 ORTHO05D005195 1.7e-62 243.0 180 70.6
FvH4_2g00310 Fragaria vesca HOM05D004360 ORTHO05D005195 2.2e-62 242.7 179 70.9
Sopen11g020480 Solanum pennellii HOM05D004360 ORTHO05D005195 2.2e-62 242.7 192 66.1
C06p12320 Brassica napus HOM05D004360 ORTHO05D005195 2.9e-62 242.3 179 67.6
Sopen06g022920 Solanum pennellii HOM05D004360 ORTHO05D005195 2.9e-62 242.3 175 68.6
BcaC08g43849 Brassica carinata HOM05D004360 ORTHO05D005195 3.8e-62 241.9 179 67.6
BolC6t36383H Brassica oleracea HOM05D004360 ORTHO05D005195 3.8e-62 241.9 179 67.6
CARHR261230 Cardamine hirsuta HOM05D004360 ORTHO05D005195 3.8e-62 241.9 175 68.6
Os05g0105500 Oryza sativa ssp. japonica HOM05D004360 ORTHO05D005195 6.5e-62 241.1 166 66.9
Solyc06g064450.3 Solanum lycopersicum HOM05D004360 ORTHO05D005195 8.5e-62 240.7 175 68.6
Peaxi162Scf00078g00103 Petunia axillaris HOM05D004360 ORTHO05D005195 1.5e-61 240.0 192 64.6
FAN20G2250 Fragaria x ananassa HOM05D004360 ORTHO05D005195 1.9e-61 239.6 179 70.4
Medtr4g030060 Medicago truncatula HOM05D004360 ORTHO05D005195 1.9e-61 239.6 173 68.2
EL10Ac1g01286 Beta vulgaris HOM05D004360 ORTHO05D005195 2.5e-61 239.2 179 66.5
Carub.0001s3168 Capsella rubella HOM05D004360 ORTHO05D005195 3.2e-61 238.8 166 71.1
TWI18G1157 Tripterygium wilfordii HOM05D004360 ORTHO05D005195 3.2e-61 238.8 168 72.0
CAN.G970.20 Capsicum annuum HOM05D004360 ORTHO05D005195 4.2e-61 238.4 197 64.0
arahy.Tifrunner.gnm1.ann1.19X5J5 Arachis hypogaea HOM05D004360 ORTHO05D005195 5.5e-61 238.0 159 77.4
Rhsim12G0001800 Rhododendron simsii HOM05D004360 ORTHO05D005195 7.2e-61 237.7 254 52.8
Sp6g07270 Schrenkiella parvula HOM05D004360 ORTHO05D005195 7.2e-61 237.7 175 67.4
AL6G43950 Arabidopsis lyrata HOM05D004360 ORTHO05D005195 1.2e-60 236.9 176 67.6
Carub.0006s2871 Capsella rubella HOM05D004360 ORTHO05D005195 1.2e-60 236.9 175 66.3
RcHm_v2.0_Chr6g0249591 Rosa chinensis HOM05D004360 ORTHO05D005195 1.2e-60 236.9 172 69.2
SEGI_09604 Sequoiadendron giganteum HOM05D004360 ORTHO05D005195 1.2e-60 236.9 179 65.4
BcaB07g32992 Brassica carinata HOM05D004360 ORTHO05D005195 1.6e-60 236.5 159 75.5
unitig_8.g4904 Utricularia gibba HOM05D004360 ORTHO05D005195 1.6e-60 236.5 177 65.5
AL1G47880 Arabidopsis lyrata HOM05D004360 ORTHO05D005195 4.7e-60 235.0 162 71.6
BcaC03g16418 Brassica carinata HOM05D004360 ORTHO05D005195 4.7e-60 235.0 159 71.1
C02p42460 Brassica napus HOM05D004360 ORTHO05D005195 4.7e-60 235.0 159 71.1
A02p26710 Brassica napus HOM05D004360 ORTHO05D005195 6.1e-60 234.6 159 71.1
BraA02t07674Z Brassica rapa HOM05D004360 ORTHO05D005195 6.1e-60 234.6 159 71.1
Psat7g229800 Pisum sativum HOM05D004360 ORTHO05D005195 6.1e-60 234.6 178 66.9
HPP92_009217 Vanilla planifolia HOM05D004360 ORTHO05D005195 1.0e-59 233.8 173 65.9
AT4G10140 Arabidopsis thaliana HOM05D004360 ORTHO05D005195 1.8e-59 233.0 175 66.3
BcaB05g23914 Brassica carinata HOM05D004360 ORTHO05D005195 1.8e-59 233.0 159 70.4
Thhalv10029009m.g Eutrema salsugineum HOM05D004360 ORTHO05D005195 2.3e-59 232.6 159 72.3
Lsat_1_v5_gn_1_24560 Lactuca sativa HOM05D004360 ORTHO05D005195 3.0e-59 232.3 176 68.2
Sed0002471 Sechium edule HOM05D004360 ORTHO05D005195 3.0e-59 232.3 161 69.6
PGSC0003DMG400006668 Solanum tuberosum HOM05D004360 ORTHO05D005195 3.0e-59 232.3 192 62.5
CAN.G14.46 Capsicum annuum HOM05D004360 ORTHO05D005195 3.3e-58 228.8 168 67.9
Nitab4.5_0000079g0160 Nicotiana tabacum HOM05D004360 ORTHO05D005195 4.4e-58 228.4 194 63.4
A09p28790 Brassica napus HOM05D004360 ORTHO05D005195 5.7e-58 228.0 174 64.9
Thhalv10008879m.g Eutrema salsugineum HOM05D004360 ORTHO05D005195 5.7e-58 228.0 180 63.9
Lsat_1_v5_gn_6_109600 Lactuca sativa HOM05D004360 ORTHO05D005195 9.7e-58 227.3 173 68.8
Aa31LG6G7960 Aethionema arabicum HOM05D004360 ORTHO05D005195 1.7e-57 226.5 187 63.1
CDE02G3351 Ceratophyllum demersum HOM05D004360 ORTHO05D005195 2.2e-57 226.1 159 71.7
HanXRQChr05g0150501 Helianthus annuus HOM05D004360 ORTHO05D005195 2.2e-57 226.1 176 66.5
HanXRQChr08g0226271 Helianthus annuus HOM05D004360 ORTHO05D005195 4.8e-57 224.9 176 67.0
Zm00001eb289060 Zea mays HOM05D004360 ORTHO05D005195 4.8e-57 224.9 171 61.4
Gohir.D08G249500 Gossypium hirsutum HOM05D004360 ORTHO05D005195 6.3e-57 224.6 153 73.2
Gorai.004G266100 Gossypium raimondii HOM05D004360 ORTHO05D005195 6.3e-57 224.6 153 73.2
Gohir.A08G229200 Gossypium hirsutum HOM05D004360 ORTHO05D005195 8.3e-57 224.2 153 72.5
HanXRQChr12g0369241 Helianthus annuus HOM05D004360 ORTHO05D005195 1.4e-56 223.4 175 67.4
C09p36560 Brassica napus HOM05D004360 ORTHO05D005195 2.4e-56 222.6 170 65.9
ECA247G3060 Erigeron canadensis HOM05D004360 ORTHO05D005195 9.1e-56 220.7 177 66.1
Zm00001eb207120 Zea mays HOM05D004360 ORTHO05D005195 1.0e-54 217.2 169 59.2
CiPaw.03G012600 Carya illinoinensis HOM05D004360 ORTHO05D005195 1.3e-54 216.9 127 81.9
Haze_14005 Corylus avellana HOM05D004360 ORTHO05D005195 1.3e-54 216.9 127 81.9
Aa31LG9G11860 Aethionema arabicum HOM05D004360 ORTHO05D005195 1.7e-54 216.5 201 59.2
BraA09t38441Z Brassica rapa HOM05D004360 ORTHO05D005195 2.5e-53 212.6 203 55.7
BolC2t10286H Brassica oleracea HOM05D004360 ORTHO05D005195 2.7e-52 209.1 144 71.5
BolC9t56489H Brassica oleracea HOM05D004360 ORTHO05D005195 1.0e-51 207.2 199 56.3
Sc06g0000070 Simmondsia chinensis HOM05D004360 ORTHO05D005195 1.0e-51 207.2 126 77.8
BcaC04g21022 Brassica carinata HOM05D004360 ORTHO05D005195 2.0e-50 203.0 161 64.6
Migut.C01399 Erythranthe guttata HOM05D004360 ORTHO05D005195 4.4e-50 201.8 166 65.1
Sabra13G0081200 Salix brachista HOM05D004360 ORTHO05D005195 3.1e-48 195.7 126 74.6
Sp1g28930 Schrenkiella parvula HOM05D004360 ORTHO05D002912 4.5e-47 191.8 128 73.4
PSO210G7326 Papaver somniferum HOM05D004360 ORTHO05D005195 1.0e-46 190.7 130 73.1
Ah.05g170480 Amaranthus hybridus HOM05D004360 ORTHO05D005195 1.3e-46 190.3 132 75.0
CARHR032930 Cardamine hirsuta HOM05D004360 ORTHO05D005195 1.3e-46 190.3 127 74.0
Dinv37400 Davidia involucrata HOM05D004360 ORTHO05D005195 5.0e-46 188.3 123 76.4
Duzib116G0205 Durio zibethinus HOM05D004360 ORTHO05D005195 1.1e-45 187.2 124 73.4
AT1G33490 Arabidopsis thaliana HOM05D004360 ORTHO05D005195 1.5e-45 186.8 120 76.7
BcaB01g01456 Brassica carinata HOM05D004360 ORTHO05D005195 1.4e-43 180.3 155 61.9
DCAR_003506 Daucus carota HOM05D005117 ORTHO05D005956 6.8e-43 177.9 122 69.7
Pp3c23_11640 Physcomitrium patens HOM05D004360 ORTHO05D005195 1.3e-41 173.7 165 52.7
Mapoly0022s0158 Marchantia polymorpha HOM05D004360 ORTHO05D005195 2.2e-41 172.9 162 54.9
TPR.G4421 Trifolium pratense HOM05D004360 ORTHO05D001407 2.8e-41 172.6 130 66.9
SMO143G0101 Selaginella moellendorffii HOM05D004360 ORTHO05D005195 3.7e-41 172.2 151 55.0
Pp3c17_19860 Physcomitrium patens HOM05D004360 ORTHO05D005195 1.4e-40 170.2 140 59.3
AagrBONN_evm.TU.Sc2ySwM_368.413 Anthoceros agrestis HOM05D004360 ORTHO05D005195 1.6e-39 166.8 145 57.9
SHI16862 Sapria himalayana HOM05D004360 ORTHO05D005195 1.7e-38 163.3 135 62.2
CBR_g61487 Chara braunii HOM05D004360 ORTHO05D005195 1.1e-37 160.6 151 52.3
SEGI_01847 Sequoiadendron giganteum HOM05D004360 ORTHO05D005195 8.0e-36 154.5 154 52.6
SMO356G0006 Selaginella moellendorffii HOM05D004360 ORTHO05D005195 1.8e-35 153.3 151 50.3
unitig_578.g16114 Utricularia gibba HOM05D004360 ORTHO05D005195 1.2e-34 150.6 114 64.9
BcaB01g01455 Brassica carinata HOM05D004360 ORTHO05D005195 1.4e-32 143.7 88 77.3
ECA246G3009 Erigeron canadensis HOM05D004360 ORTHO05D005195 6.8e-27 124.8 108 62.0
TAR375G0667 Trochodendron aralioides HOM05D004360 ORTHO05D005195 7.5e-26 121.3 112 58.0
FAN24G1049 Fragaria x ananassa HOM05D004360 ORTHO05D005195 2.4e-24 116.3 152 46.1
HanXRQChr09g0244511 Helianthus annuus HOM05D004360 ORTHO05D005195 7.3e-21 104.8 90 61.1
Pp3c14_12450 Physcomitrium patens HOM05D004360 ORTHO05D005195 8.1e-12 74.7 78 44.9
TPR.G39583 Trifolium pratense HOM05D004360 ORTHO05D005195 9.9e-10 67.8 45 66.7
Dinv02982 Davidia involucrata HOM05D004360 ORTHO05D005195 1.7e-09 67.0 46 69.6
Dinv17160 Davidia involucrata HOM05D004360 ORTHO05D005195 1.7e-09 67.0 46 69.6
arahy.Tifrunner.gnm1.ann1.B7FYB2 Arachis hypogaea HOM05D001689 ORTHO05D001643 8.4e-09 64.7 44 65.9
Dinv04074 Davidia involucrata HOM05D004360 ORTHO05D005195 1.1e-08 64.3 47 66.0
Dinv08764 Davidia involucrata HOM05D004360 ORTHO05D005195 2.4e-08 63.2 46 63.0


User provided reference genes

Program Settings