Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p000021 Quercus lobata HOM05D030851 ORTHO05D018095 5.0e-117 424.5 219 100.0
QL09p042807 Quercus lobata HOM05D030851 ORTHO05D018095 5.0e-117 424.5 219 100.0
QL09p041479 Quercus lobata HOM05D000095 ORTHO05D018095 4.8e-51 205.3 264 52.3
QL09p042550 Quercus lobata HOM05D000095 ORTHO05D018095 2.1e-46 189.9 264 51.5
QL09p027737 Quercus lobata HOM05D000095 ORTHO05D000393 4.2e-31 139.0 162 53.7
Cfa001850 Carpinus fangiana HOM05D000095 ORTHO05D000393 2.6e-20 103.2 182 42.3
QL09p042695 Quercus lobata HOM05D030851 ORTHO05D018095 5.9e-17 92.0 95 61.1
FAN03G3170 Fragaria x ananassa HOM05D000095 ORTHO05D000393 8.5e-16 88.2 187 37.4
QL09p043385 Quercus lobata HOM05D000095 ORTHO05D018095 1.9e-15 87.0 230 36.1
QL09p043370 Quercus lobata HOM05D000095 ORTHO05D018095 5.5e-15 85.5 154 40.9
QL09p042624 Quercus lobata HOM05D030851 ORTHO05D018095 7.2e-15 85.1 129 48.8
MD07G1247900 Malus domestica HOM05D000095 ORTHO05D000393 1.2e-14 84.3 171 34.5
RcHm_v2.0_Chr1g0373541 Rosa chinensis HOM05D000095 ORTHO05D000393 1.0e-13 81.3 241 34.0
Prupe.2G271900 Prunus persica HOM05D000095 ORTHO05D000393 3.0e-13 79.7 169 34.3
MD01G1176700 Malus domestica HOM05D000095 ORTHO05D000393 4.0e-13 79.3 171 33.9
FvH4_7g26850 Fragaria vesca HOM05D000095 ORTHO05D000393 1.7e-11 73.9 237 32.9
QL05p027870 Quercus lobata HOM05D000095 ORTHO05D018095 1.7e-11 73.9 165 33.9
Haze_16694 Corylus avellana HOM05D000095 ORTHO05D000393 1.1e-10 71.2 112 43.8
FAN06G3122 Fragaria x ananassa HOM05D000095 ORTHO05D000393 1.4e-10 70.9 241 31.5
Manes.14G039400 Manihot esculenta HOM05D000095 ORTHO05D000393 2.7e-09 66.6 163 34.4
Hma1.2p1_0502F.1_g167770 Hydrangea macrophylla HOM05D000095 ORTHO05D000393 2.9e-08 63.2 181 31.5
Haze_22212 Corylus avellana HOM05D000095 ORTHO05D000393 6.6e-08 62.0 206 30.6
Sed0022911 Sechium edule HOM05D000095 ORTHO05D000393 1.1e-07 61.2 171 29.2
TAR636G1554 Trochodendron aralioides HOM05D000095 ORTHO05D000393 1.5e-07 60.8 150 36.0
THA.LOC104820163 Tarenaya hassleriana HOM05D000095 ORTHO05D000393 1.9e-07 60.5 154 31.2
TWI39G0029 Tripterygium wilfordii HOM05D000095 ORTHO05D000393 4.3e-07 59.3 181 31.5
CARHR275420 Cardamine hirsuta HOM05D000095 ORTHO05D000393 7.3e-07 58.5 157 33.1
TAR636G1410 Trochodendron aralioides HOM05D000095 ORTHO05D000393 9.5e-07 58.2 170 33.5
Duzib068G1087 Durio zibethinus HOM05D000095 ORTHO05D035088 1.2e-06 57.8 159 32.7
Aqoxy3G02709 Aquilegia oxysepala HOM05D000095 ORTHO05D000393 2.1e-06 57.0 122 36.1
Aqoxy440s001 Aquilegia oxysepala HOM05D000095 ORTHO05D000393 2.1e-06 57.0 122 36.1
Gohir.A09G249000 Gossypium hirsutum HOM05D000095 ORTHO05D000393 2.1e-06 57.0 54 51.9
BolC2t12201H Brassica oleracea HOM05D000095 ORTHO05D000393 2.8e-06 56.6 150 30.0
ClCG07G017060 Citrullus lanatus HOM05D000095 ORTHO05D000393 2.8e-06 56.6 192 31.2
BcaC03g18079 Brassica carinata HOM05D000095 ORTHO05D000393 3.6e-06 56.2 150 30.7
C02p61510 Brassica napus HOM05D000095 ORTHO05D000393 3.6e-06 56.2 150 30.7
Cpa.g.sc13.246 Carica papaya HOM05D000095 ORTHO05D000393 3.6e-06 56.2 162 31.5
HanXRQChr10g0319241 Helianthus annuus HOM05D000095 ORTHO05D000393 3.6e-06 56.2 83 42.2
Peaxi162Scf00498g00013 Petunia axillaris HOM05D000095 ORTHO05D000393 3.6e-06 56.2 56 48.2
TAR374G0352 Trochodendron aralioides HOM05D000095 ORTHO05D000393 3.6e-06 56.2 161 30.4
Nitab4.5_0004456g0060 Nicotiana tabacum HOM05D000095 ORTHO05D000393 4.7e-06 55.8 109 35.8
Solyc12g008800.3 Solanum lycopersicum HOM05D000095 ORTHO05D000393 4.7e-06 55.8 47 53.2
BolC7t45055H Brassica oleracea HOM05D000095 ORTHO05D000393 6.1e-06 55.5 145 32.4
CDE12G0127 Ceratophyllum demersum HOM05D000095 ORTHO05D000393 6.1e-06 55.5 130 32.3
Gohir.D09G249900 Gossypium hirsutum HOM05D000095 ORTHO05D000393 6.1e-06 55.5 173 30.1
Gorai.006G274300 Gossypium raimondii HOM05D000095 ORTHO05D000393 6.1e-06 55.5 51 52.9
MSTRG.19526 Avicennia marina HOM05D000095 ORTHO05D000393 8.0e-06 55.1 36 69.4
CSS0018279 Camellia sinensis var. sinensis HOM05D000095 ORTHO05D000393 8.0e-06 55.1 38 65.8
CSS0049647 Camellia sinensis var. sinensis HOM05D000095 ORTHO05D000393 8.0e-06 55.1 38 65.8
COL.COLO4_18219 Corchorus olitorius HOM05D000095 ORTHO05D000393 8.0e-06 55.1 36 69.4
Duzib084G0660 Durio zibethinus HOM05D000095 ORTHO05D000393 8.0e-06 55.1 65 44.6
Sed0010972 Sechium edule HOM05D000095 ORTHO05D000393 8.0e-06 55.1 171 30.4


User provided reference genes

Program Settings