Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p065087 Quercus lobata HOM05D004876 ORTHO05D005488 3.9e-88 328.2 175 100.0
CiPaw.02G093900 Carya illinoinensis HOM05D004876 ORTHO05D005488 1.5e-68 263.1 174 79.9
CiPaw.04G175400 Carya illinoinensis HOM05D004876 ORTHO05D005488 4.5e-68 261.5 174 79.3
Potri.019G061200 Populus trichocarpa HOM05D004876 ORTHO05D005488 2.1e-65 252.7 175 80.6
Duzib114G0677 Durio zibethinus HOM05D004876 ORTHO05D005488 2.6e-63 245.7 177 75.7
Prupe.2G265600 Prunus persica HOM05D004876 ORTHO05D005488 2.2e-62 242.7 174 77.0
Atru.chr12.194 Acer truncatum HOM05D004876 ORTHO05D005488 2.0e-60 236.1 185 71.9
TWI09G0651 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 3.5e-60 235.3 185 72.4
MD01G1169400 Malus domestica HOM05D004876 ORTHO05D005488 2.2e-59 232.6 171 74.9
ClCG07G004830 Citrullus lanatus HOM05D004876 ORTHO05D005488 2.1e-57 226.1 172 70.3
Lj1g0004349 Lotus japonicus HOM05D004876 ORTHO05D005488 2.1e-57 226.1 173 74.0
VMungo1309G0380 Vigna mungo HOM05D004876 ORTHO05D005488 2.1e-57 226.1 173 71.7
CsaV3_5G010740 Cucumis sativus L. HOM05D004876 ORTHO05D005488 3.6e-57 225.3 172 70.3
Cpa.g.sc128.23 Carica papaya HOM05D004876 ORTHO05D005488 4.7e-57 224.9 174 73.6
MBI15_g39395_MAGBIO Magnolia biondii HOM05D004876 ORTHO05D005488 8.0e-57 224.2 167 73.7
Phvul.009G042700 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 2.3e-56 222.6 174 70.7
Glyma.06G141500 Glycine max HOM05D004876 ORTHO05D005488 4.0e-56 221.9 174 72.4
TAR636G2293 Trochodendron aralioides HOM05D004876 ORTHO05D005488 4.0e-56 221.9 174 71.8
CANSAT64G2122 Cannabis sativa HOM05D004876 ORTHO05D005488 3.4e-55 218.8 180 68.3
Phvul.005G185900 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 3.4e-55 218.8 174 70.1
THA.LOC104824370 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 3.4e-55 218.8 173 68.2
TWI53G0120 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 4.4e-55 218.4 180 69.4
MELO3C020110.2 Cucumis melo HOM05D004876 ORTHO05D005488 5.7e-55 218.0 172 69.2
Haze_17370 Corylus avellana HOM05D004876 ORTHO05D005488 1.7e-54 216.5 174 68.4
PGR142G2846 Punica granatum HOM05D004876 ORTHO05D005488 1.7e-54 216.5 177 66.7
Thecc.10G185000 Theobroma cacao HOM05D004876 ORTHO05D005488 2.8e-54 215.7 182 68.1
CANSAT64G1352 Cannabis sativa HOM05D004876 ORTHO05D005488 3.7e-54 215.3 180 67.2
FAN12G2601 Fragaria x ananassa HOM05D004876 ORTHO05D005488 3.7e-54 215.3 169 69.8
Sed0020097 Sechium edule HOM05D004876 ORTHO05D005488 1.4e-53 213.4 172 66.9
RcHm_v2.0_Chr1g0372561 Rosa chinensis HOM05D004876 ORTHO05D005488 2.4e-53 212.6 167 70.7
FvH4_7g26120 Fragaria vesca HOM05D004876 ORTHO05D005488 3.1e-53 212.2 180 67.8
Manes.10G044800 Manihot esculenta HOM05D004876 ORTHO05D005488 3.1e-53 212.2 174 70.1
FAN10G2920 Fragaria x ananassa HOM05D004876 ORTHO05D005488 4.1e-53 211.8 178 68.5
Lalb_Chr11g0067701 Lupinus albus HOM05D004876 ORTHO05D005488 3.5e-52 208.8 180 65.0
FAN03G2458 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.7e-51 206.5 176 66.5
AUR62028732 Chenopodium quinoa HOM05D004876 ORTHO05D005488 3.8e-51 205.3 174 63.8
TPR.G13975 Trifolium pratense HOM05D004876 ORTHO05D005488 5.0e-51 204.9 175 67.4
AUR62008150 Chenopodium quinoa HOM05D004876 ORTHO05D005488 6.5e-51 204.5 174 63.8
FvH4_4g04970 Fragaria vesca HOM05D004876 ORTHO05D005488 1.1e-50 203.8 188 62.8
FAN06G0183 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.1e-50 203.8 180 66.1
COL.COLO4_19475 Corchorus olitorius HOM05D004876 ORTHO05D005488 2.5e-50 202.6 181 65.2
TPR.G28952 Trifolium pratense HOM05D004876 ORTHO05D005488 4.2e-50 201.8 173 65.9
PSO675G4155 Papaver somniferum HOM05D004876 ORTHO05D005488 9.4e-50 200.7 171 63.2
Os03g0114200 Oryza sativa ssp. japonica HOM05D004876 ORTHO05D005488 1.2e-49 200.3 170 61.2
Psat5g069360 Pisum sativum HOM05D004876 ORTHO05D005488 4.7e-49 198.4 174 66.1
ATR0733G227 Amborella trichopoda HOM05D004876 ORTHO05D005488 1.8e-48 196.4 174 62.1
vmacro06902 Vaccinium macrocarpon HOM05D004876 ORTHO05D005488 1.8e-48 196.4 181 61.3
AL4G38670 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 1.5e-47 193.4 177 61.0
Carub.0004s2308 Capsella rubella HOM05D004876 ORTHO05D005488 1.5e-47 193.4 177 61.6
A04p31160 Brassica napus HOM05D004876 ORTHO05D005488 2.6e-47 192.6 174 59.2
C04p68560 Brassica napus HOM05D004876 ORTHO05D005488 2.6e-47 192.6 174 59.2
CDE07G1038 Ceratophyllum demersum HOM05D004876 ORTHO05D005488 2.6e-47 192.6 172 66.3
PSO170G6098 Papaver somniferum HOM05D004876 ORTHO05D005488 2.6e-47 192.6 175 61.7
BraA04t18571Z Brassica rapa HOM05D004876 ORTHO05D005488 5.7e-47 191.4 174 58.6
Sp4g23100 Schrenkiella parvula HOM05D004876 ORTHO05D005488 5.7e-47 191.4 177 61.0
ATR1127G178 Amborella trichopoda HOM05D004876 ORTHO05D005488 7.5e-47 191.0 170 60.6
Gohir.D10G184200 Gossypium hirsutum HOM05D004876 ORTHO05D005488 7.5e-47 191.0 182 62.1
Gorai.011G206400 Gossypium raimondii HOM05D004876 ORTHO05D005488 7.5e-47 191.0 182 62.1
EL10Ac5g10661 Beta vulgaris HOM05D004876 ORTHO05D005488 9.8e-47 190.7 174 62.6
BcaB06g29175 Brassica carinata HOM05D004876 ORTHO05D005488 9.8e-47 190.7 177 61.0
AL4G34450 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 1.3e-46 190.3 178 60.1
BolC4t28355H Brassica oleracea HOM05D004876 ORTHO05D005488 2.2e-46 189.5 174 59.2
Gohir.A10G177600 Gossypium hirsutum HOM05D004876 ORTHO05D005488 2.2e-46 189.5 182 61.5
AT2G40780 Arabidopsis thaliana HOM05D004876 ORTHO05D005488 3.7e-46 188.7 175 60.0
Ciclev10032334m.g Citrus clementina HOM05D004876 ORTHO05D005488 1.4e-45 186.8 160 64.4
Migut.F01232 Erythranthe guttata HOM05D004876 ORTHO05D005488 2.4e-45 186.0 174 60.9
Duzib106G1237 Durio zibethinus HOM05D004876 ORTHO05D005488 4.1e-45 185.3 181 61.3
Aqoxy6G02070 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 1.6e-44 183.3 171 59.6
HPP92_015433 Vanilla planifolia HOM05D004876 ORTHO05D005488 1.6e-44 183.3 166 62.0
Thhalv10017311m.g Eutrema salsugineum HOM05D004876 ORTHO05D005488 2.7e-44 182.6 172 59.9
THA.LOC104803220 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 2.7e-44 182.6 175 58.9
Dinv37250 Davidia involucrata HOM05D004876 ORTHO05D005488 4.5e-44 181.8 170 60.0
CARHR135880 Cardamine hirsuta HOM05D004876 ORTHO05D005488 5.9e-44 181.4 180 57.8
FAN17G0734 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.3e-43 180.3 247 49.0
THA.LOC104808402 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 2.9e-43 179.1 134 69.4
Nitab4.5_0006356g0050 Nicotiana tabacum HOM05D004876 ORTHO05D005488 5.0e-43 178.3 172 58.7
Sc10g0003050 Simmondsia chinensis HOM05D004876 ORTHO05D005488 8.6e-43 177.6 124 70.2
Peaxi162Scf00073g02225 Petunia axillaris HOM05D004876 ORTHO05D005488 1.5e-42 176.8 172 58.1
Aqoxy2G01672 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 2.5e-42 176.0 171 57.3
Zm00001eb000910 Zea mays HOM05D004876 ORTHO05D005488 2.5e-42 176.0 173 57.8
Aa31LG3G1350 Aethionema arabicum HOM05D004876 ORTHO05D005488 3.3e-42 175.6 171 57.9
CiPaw.04G175300 Carya illinoinensis HOM05D004876 ORTHO05D005488 7.2e-42 174.5 107 85.0
Ca_29868_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 1.2e-41 173.7 109 84.4
Nitab4.5_0000171g0270 Nicotiana tabacum HOM05D004876 ORTHO05D005488 1.6e-41 173.3 173 58.4
Sabra19G0074800 Salix brachista HOM05D004876 ORTHO05D005488 1.6e-41 173.3 113 80.5
Rhsim03G0153600 Rhododendron simsii HOM05D004876 ORTHO05D005488 2.1e-41 172.9 181 55.8
CSS0007534 Camellia sinensis var. sinensis HOM05D004876 ORTHO05D005488 2.8e-41 172.6 172 56.4
CAN.G1229.8 Capsicum annuum HOM05D004876 ORTHO05D005488 1.4e-40 170.2 170 56.5
HanXRQChr14g0460541 Helianthus annuus HOM05D004876 ORTHO05D005488 1.4e-40 170.2 174 59.8
Ca_29506_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 1.8e-40 169.9 173 57.8
PGR142G0395 Punica granatum HOM05D004876 ORTHO05D005488 2.3e-40 169.5 166 55.4
Peaxi162Scf00167g01129 Petunia axillaris HOM05D004876 ORTHO05D005488 4.0e-40 168.7 140 63.6
Cc02_g05210 Coffea canephora HOM05D004876 ORTHO05D005488 1.2e-39 167.2 174 56.3
ECA247G1702 Erigeron canadensis HOM05D004876 ORTHO05D008274 2.6e-39 166.0 154 61.7
SEGI_18121 Sequoiadendron giganteum HOM05D004876 ORTHO05D005488 5.7e-39 164.9 177 53.1
Aqoxy5G02193 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 7.5e-39 164.5 134 61.9
Migut.A00831 Erythranthe guttata HOM05D004876 ORTHO05D005488 1.7e-38 163.3 171 53.2
Lsat_1_v5_gn_5_104800 Lactuca sativa HOM05D004876 ORTHO05D005488 2.2e-38 162.9 170 57.6
Ca_16858_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 8.3e-38 161.0 190 53.2
arahy.Tifrunner.gnm1.ann1.58ULDB Arachis hypogaea HOM05D004876 ORTHO05D005488 1.1e-37 160.6 184 54.9
Lj6g0009237 Lotus japonicus HOM05D004876 ORTHO05D005488 1.1e-37 160.6 173 59.0
PGSC0003DMG400011645 Solanum tuberosum HOM05D004876 ORTHO05D005488 5.4e-37 158.3 175 53.1
BcaB01g03515 Brassica carinata HOM05D004876 ORTHO05D005488 7.0e-37 157.9 175 54.9
BcaC02g12879 Brassica carinata HOM05D004876 ORTHO05D005488 7.0e-37 157.9 132 60.6
Sopen05g030710 Solanum pennellii HOM05D004876 ORTHO05D005488 1.2e-36 157.1 171 52.0
Solyc05g052180.3 Solanum lycopersicum HOM05D004876 ORTHO05D005488 8.6e-35 151.0 168 53.0
unitig_736.g22953 Utricularia gibba HOM05D004876 ORTHO05D005488 8.6e-35 151.0 172 53.5
BcaB05g22749 Brassica carinata HOM05D004876 ORTHO05D005488 1.1e-34 150.6 132 59.8
Ah.11g051130 Amaranthus hybridus HOM05D004876 ORTHO05D005488 2.5e-34 149.4 160 56.2
MSTRG.8381 Avicennia marina HOM05D004876 ORTHO05D005488 2.5e-34 149.4 174 53.4
Lsat_1_v5_gn_2_126741 Lactuca sativa HOM05D004876 ORTHO05D005488 3.3e-34 149.1 167 56.3
GSVIVG01038577001 Vitis vinifera HOM05D004876 ORTHO05D005488 4.3e-34 148.7 124 66.1
Medtr3g093790 Medicago truncatula HOM05D004876 ORTHO05D005488 7.3e-34 147.9 159 55.3
Rhsim04G0113200 Rhododendron simsii HOM05D004876 ORTHO05D005488 2.8e-33 146.0 182 51.1
Oeu006067.1 Olea europaea HOM05D004876 ORTHO05D005488 8.0e-33 144.4 171 49.1
Dinv21858 Davidia involucrata HOM05D004876 ORTHO05D005488 5.2e-32 141.7 109 70.6
SalBow7G3110 Salvia bowleyana HOM05D004876 ORTHO05D005488 8.9e-32 141.0 179 50.3
Eucgr.G03147 Eucalyptus grandis HOM05D004876 ORTHO05D005488 1.7e-30 136.7 185 48.6
SGA_v2.0_scaffold2G00887 Striga asiatica HOM05D004876 ORTHO05D005488 1.7e-30 136.7 177 48.6
Nitab4.5_0008902g0030 Nicotiana tabacum HOM05D004876 ORTHO05D005488 4.1e-29 132.1 172 48.8
Mapoly0014s0200 Marchantia polymorpha HOM05D004876 ORTHO05D005488 7.0e-29 131.3 179 43.6
Actinidia13638 Actinidia chinensis HOM05D004876 ORTHO05D005488 6.6e-27 124.8 129 55.0
Lj8A52T23 Lonicera japonica HOM05D004876 ORTHO05D005488 6.6e-27 124.8 109 63.3
Nn2g10267 Nelumbo nucifera HOM05D004876 ORTHO05D005488 5.6e-26 121.7 83 78.3
Nn1g06656 Nelumbo nucifera HOM05D004876 ORTHO05D005488 2.1e-25 119.8 121 62.0
Pp3c16_8280 Physcomitrium patens HOM05D004876 ORTHO05D005488 2.1e-25 119.8 186 40.3
Sopen03g025590 Solanum pennellii HOM05D004876 ORTHO05D005488 1.2e-23 114.0 109 58.7
PGSC0003DMG400020604 Solanum tuberosum HOM05D004876 ORTHO05D005488 2.2e-22 109.8 109 56.9
TPR.G24790 Trifolium pratense HOM05D004876 ORTHO05D005488 3.7e-22 109.0 80 76.2
HanXRQChr07g0204961 Helianthus annuus HOM05D004876 ORTHO05D005488 4.9e-22 108.6 107 57.9
AagrBONN_evm.TU.Sc2ySwM_368.2679 Anthoceros agrestis HOM05D004876 ORTHO05D005488 2.5e-18 96.3 174 37.9
C01p26050 Brassica napus HOM05D004876 ORTHO05D005488 2.1e-17 93.2 97 54.6
C03p81600 Brassica napus HOM05D004876 ORTHO05D005488 2.1e-17 93.2 104 52.9
BolC3t20430H Brassica oleracea HOM05D004876 ORTHO05D005488 2.1e-17 93.2 104 52.9
Cre03.g155800 Chlamydomonas reinhardtii HOM05D004876 ORTHO05D005488 3.9e-11 72.4 90 42.2
TAR622G0554 Trochodendron aralioides HOM05D006000 ORTHO05D007749 2.8e-09 66.2 133 37.6
AL4G14440 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 8.1e-09 64.7 65 53.8
MCO11G196 Micromonas commoda HOM05D004876 ORTHO05D005488 1.4e-08 63.9 119 31.9
Actinidia31636 Actinidia chinensis HOM05D004876 ORTHO05D005488 2.4e-08 63.2 88 43.2
Nitab4.5_0001671g0020 Nicotiana tabacum HOM05D004876 ORTHO05D005488 4.0e-08 62.4 65 55.4
Zm00001eb290470 Zea mays HOM05D004876 ORTHO05D005488 2.2e-06 56.6 61 44.3
ATR1127G058 Amborella trichopoda HOM05D004876 ORTHO05D005488 4.9e-06 55.5 61 45.9


User provided reference genes

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