Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 5.7e-95 350.9 175 100.0
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 6.1e-73 277.7 175 81.7
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 3.8e-67 258.5 176 76.7
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 5.0e-67 258.1 177 73.4
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 5.5e-66 254.6 175 74.3
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 9.4e-66 253.8 175 73.1
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 1.6e-65 253.1 176 73.3
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 1.6e-65 253.1 175 73.1
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 2.1e-65 252.7 175 73.1
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 2.1e-65 252.7 175 73.1
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 2.7e-65 252.3 177 71.8
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 8.0e-65 250.8 177 75.1
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 2.3e-64 249.2 176 72.2
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 3.0e-64 248.8 182 73.6
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 8.8e-64 247.3 177 73.4
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 2.0e-63 246.1 175 72.0
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 2.6e-63 245.7 177 71.8
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 5.7e-63 244.6 176 70.5
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 7.4e-63 244.2 177 72.3
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 7.4e-63 244.2 177 70.1
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 3.7e-62 241.9 175 70.3
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 4.8e-62 241.5 180 69.4
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 2.4e-61 239.2 176 67.6
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 3.1e-61 238.8 176 71.0
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 3.1e-61 238.8 176 71.6
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 9.1e-61 237.3 180 71.1
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 1.2e-60 236.9 180 71.1
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 1.6e-60 236.5 175 68.0
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 4.5e-60 235.0 180 70.6
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 4.5e-60 235.0 177 71.2
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 3.8e-59 231.9 179 68.2
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 3.8e-59 231.9 177 67.8
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 3.8e-59 231.9 175 68.0
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 3.8e-59 231.9 186 66.1
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 3.8e-59 231.9 177 68.4
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 5.0e-59 231.5 176 67.6
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 6.5e-59 231.1 176 68.2
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 1.5e-58 229.9 179 65.4
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 1.9e-58 229.6 174 69.5
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 2.5e-58 229.2 177 64.4
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 3.2e-58 228.8 181 65.2
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 4.2e-58 228.4 176 71.0
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 5.5e-58 228.0 179 68.7
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 1.6e-57 226.5 178 67.4
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 1.6e-57 226.5 176 67.6
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 2.7e-57 225.7 177 66.7
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 6.1e-57 224.6 176 68.2
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 6.1e-57 224.6 176 68.2
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 8.0e-57 224.2 178 65.7
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 8.0e-57 224.2 178 66.9
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 8.0e-57 224.2 176 67.0
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 1.0e-56 223.8 162 70.4
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 1.8e-56 223.0 179 68.2
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 3.0e-56 222.2 177 65.0
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 4.0e-56 221.9 177 67.2
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 4.0e-56 221.9 177 67.2
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 4.0e-56 221.9 177 67.2
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 4.0e-56 221.9 175 63.4
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 6.8e-56 221.1 175 66.3
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 8.8e-56 220.7 177 65.0
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 8.8e-56 220.7 177 65.0
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 8.8e-56 220.7 177 66.7
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 8.8e-56 220.7 177 65.0
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 8.8e-56 220.7 177 66.7
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 1.2e-55 220.3 177 65.0
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 1.5e-55 219.9 180 64.4
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 4.4e-55 218.4 160 69.4
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 5.7e-55 218.0 182 62.6
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 5.7e-55 218.0 177 66.1
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 7.5e-55 217.6 162 69.1
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 1.7e-54 216.5 137 75.9
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 2.2e-54 216.1 179 63.7
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 2.2e-54 216.1 177 65.0
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 2.8e-54 215.7 174 66.1
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 6.3e-54 214.5 177 63.8
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 1.8e-53 213.0 119 84.0
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 4.1e-53 211.8 169 63.9
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 4.1e-53 211.8 183 61.7
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 5.4e-53 211.5 168 64.3
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 7.0e-53 211.1 168 63.7
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 9.1e-53 210.7 188 62.8
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 9.1e-53 210.7 171 66.7
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 2.7e-52 209.1 120 83.3
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 3.5e-52 208.8 199 56.8
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 3.5e-52 208.8 139 72.7
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 1.0e-51 207.2 175 63.4
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 1.3e-51 206.8 181 60.8
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 2.9e-51 205.7 152 70.4
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 6.5e-51 204.5 176 63.1
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 6.5e-51 204.5 118 79.7
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 1.5e-50 203.4 138 69.6
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 1.6e-49 199.9 120 79.2
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 6.1e-49 198.0 113 81.4
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 2.6e-47 192.6 183 57.9
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 3.4e-47 192.2 158 61.4
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 3.5e-44 182.2 177 54.2
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 1.0e-43 180.6 133 69.2
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 3.8e-43 178.7 181 55.8
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 4.2e-42 175.3 118 66.1
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 9.5e-42 174.1 119 67.2
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 1.2e-41 173.7 179 52.5
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 3.4e-39 165.6 125 64.0
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 2.6e-31 139.4 103 66.0
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 5.8e-31 138.3 123 65.9
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 5.8e-31 138.3 117 60.7
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 1.6e-28 130.2 124 57.3
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 1.3e-27 127.1 175 44.6
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 4.3e-26 122.1 111 60.4
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 3.1e-24 115.9 67 80.6
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 3.4e-23 112.5 119 56.3
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 2.9e-22 109.4 58 82.8
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 7.8e-20 101.3 82 64.6
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 3.9e-11 72.4 110 48.2


User provided reference genes

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