Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p064573 Quercus lobata HOM05D006817 ORTHO05D008603 1.8e-31 138.7 71 100.0
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 1.2e-24 115.9 64 89.1
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.6e-24 115.5 71 81.7
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 4.7e-24 114.0 68 80.9
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 1.4e-23 112.5 64 84.4
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 1.8e-23 112.1 63 85.7
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 3.1e-23 111.3 63 85.7
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 1.5e-22 109.0 64 82.8
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 2.0e-22 108.6 66 78.8
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 2.0e-22 108.6 64 79.7
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 2.6e-22 108.2 64 79.7
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 3.4e-22 107.8 68 77.9
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 4.4e-22 107.5 68 76.5
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 4.4e-22 107.5 68 77.9
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 4.4e-22 107.5 63 82.5
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 5.8e-22 107.1 68 77.9
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 5.8e-22 107.1 68 76.5
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 1.3e-21 105.9 63 79.4
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 1.3e-21 105.9 64 76.6
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 1.3e-21 105.9 65 76.9
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 1.3e-21 105.9 64 81.2
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 3.7e-21 104.4 63 79.4
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 4.9e-21 104.0 65 75.4
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 4.9e-21 104.0 68 73.5
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 4.9e-21 104.0 65 78.5
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 4.9e-21 104.0 64 76.6
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 6.4e-21 103.6 63 77.8
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 1.1e-20 102.8 64 76.6
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 1.4e-20 102.4 65 78.5
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 1.9e-20 102.1 68 69.1
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 1.9e-20 102.1 61 78.7
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 1.9e-20 102.1 68 69.1
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 3.2e-20 101.3 63 74.6
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 7.0e-20 100.1 64 73.4
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 7.0e-20 100.1 68 69.1
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 7.0e-20 100.1 65 75.4
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 9.2e-20 99.8 65 73.8
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 9.2e-20 99.8 63 73.0
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 1.2e-19 99.4 63 76.2
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 2.1e-19 98.6 61 73.8
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 2.1e-19 98.6 61 73.8
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 2.1e-19 98.6 65 73.8
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 2.1e-19 98.6 61 78.7
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 2.7e-19 98.2 64 71.9
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 3.5e-19 97.8 65 70.8
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 3.5e-19 97.8 65 70.8
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 3.5e-19 97.8 66 66.7
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 3.5e-19 97.8 65 73.8
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 4.6e-19 97.4 65 70.8
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 4.6e-19 97.4 65 70.8
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 6.0e-19 97.1 65 73.8
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 7.8e-19 96.7 68 67.6
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 7.8e-19 96.7 68 64.7
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 7.8e-19 96.7 68 64.7
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 7.8e-19 96.7 61 77.0
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 7.8e-19 96.7 63 73.0
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 1.0e-18 96.3 68 67.6
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 1.0e-18 96.3 63 71.4
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 2.3e-18 95.1 63 69.8
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 3.0e-18 94.7 66 66.7
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 3.0e-18 94.7 63 68.3
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 3.0e-18 94.7 63 68.3
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 3.0e-18 94.7 63 68.3
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 3.0e-18 94.7 63 69.8
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 3.9e-18 94.4 63 69.8
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 3.9e-18 94.4 63 69.8
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 3.9e-18 94.4 63 69.8
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 3.9e-18 94.4 68 64.7
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 5.1e-18 94.0 63 71.4
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 5.1e-18 94.0 61 72.1
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 5.1e-18 94.0 65 70.8
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 6.6e-18 93.6 60 73.3
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 6.6e-18 93.6 61 73.8
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 8.6e-18 93.2 60 73.3
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 3.3e-17 91.3 62 69.4
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 1.2e-16 89.4 61 68.9
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 1.6e-16 89.0 65 63.1
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 2.1e-16 88.6 59 67.8
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 2.1e-16 88.6 65 61.5
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 2.8e-16 88.2 86 55.8
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 3.6e-16 87.8 65 64.6
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 1.4e-15 85.9 61 62.3
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 2.3e-15 85.1 65 66.2
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 2.0e-14 82.0 60 61.7
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 2.6e-14 81.6 63 60.3
PGSC0003DMG400024308 Solanum tuberosum HOM05D006817 ORTHO05D008603 2.5e-09 65.1 42 71.4
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 3.3e-09 64.7 46 65.2
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 3.3e-09 64.7 40 75.0
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 4.7e-08 60.8 41 68.3
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 6.2e-08 60.5 40 67.5
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 1.4e-07 59.3 41 65.9
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 2.4e-07 58.5 68 45.6
Prupe.2G262300 Prunus persica HOM05D006817 ORTHO05D008603 7.6e-06 53.5 49 63.3


User provided reference genes

Program Settings