Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 6.0e-116 421.0 236 100.0
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 2.0e-87 326.2 236 79.7
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 8.2e-81 304.3 222 77.9
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 1.8e-80 303.1 220 78.2
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 8.8e-67 257.7 252 62.3
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 9.7e-66 254.2 257 61.5
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 1.3e-65 253.8 254 61.4
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 1.4e-64 250.4 257 58.4
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 7.7e-63 244.6 254 59.4
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 1.7e-62 243.4 256 59.0
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 2.2e-62 243.0 250 61.6
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 7.2e-61 238.0 257 58.4
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 9.4e-61 237.7 258 57.8
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 9.7e-58 227.6 245 61.6
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 2.2e-57 226.5 254 57.1
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 3.7e-57 225.7 258 58.5
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 6.3e-57 224.9 245 60.4
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 6.3e-57 224.9 252 57.5
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 8.2e-57 224.6 245 60.4
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 2.4e-56 223.0 260 57.3
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 2.4e-56 223.0 257 55.3
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 9.1e-56 221.1 252 56.0
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 1.2e-55 220.7 241 57.7
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 5.9e-55 218.4 258 55.0
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 7.7e-55 218.0 251 57.0
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 1.0e-54 217.6 258 54.7
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.0e-54 217.6 258 54.7
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 2.9e-54 216.1 238 55.0
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 3.8e-54 215.7 258 54.7
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 5.0e-54 215.3 260 55.8
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 8.5e-54 214.5 257 56.4
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 9.4e-53 211.1 236 57.6
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 2.7e-52 209.5 258 53.9
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 2.7e-52 209.5 255 54.1
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 6.1e-52 208.4 260 55.0
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 8.0e-52 208.0 256 53.9
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 2.0e-50 203.4 251 56.2
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 2.6e-50 203.0 241 56.8
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 2.6e-50 203.0 247 54.7
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 3.4e-50 202.6 244 58.6
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 3.4e-50 202.6 258 53.5
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 3.4e-50 202.6 254 52.0
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 7.5e-50 201.4 241 56.8
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 7.5e-50 201.4 249 55.4
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 1.3e-49 200.7 256 53.1
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 4.8e-49 198.7 260 51.5
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 1.1e-48 197.6 244 54.1
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 1.8e-48 196.8 237 52.3
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 1.8e-48 196.8 249 51.4
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 2.4e-48 196.4 248 52.8
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 3.1e-48 196.1 255 52.2
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 5.4e-48 195.3 242 53.3
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 4.5e-47 192.2 196 58.7
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 1.5e-45 187.2 238 54.2
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 1.5e-45 187.2 193 61.1
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 1.5e-45 187.2 237 50.6
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 1.5e-45 187.2 251 49.0
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 1.9e-45 186.8 197 56.3
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 2.5e-45 186.4 233 50.6
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 1.2e-44 184.1 245 51.0
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 2.1e-44 183.3 266 47.7
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 1.4e-43 180.6 225 52.4
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 1.5e-42 177.2 243 50.6
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 1.3e-41 174.1 255 48.2
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 4.9e-41 172.2 236 48.7
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 8.3e-41 171.4 215 54.4
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 2.4e-40 169.9 146 63.0
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 4.1e-40 169.1 238 53.4
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 9.1e-40 167.9 240 48.8
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 1.3e-38 164.1 237 51.1
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 2.9e-38 162.9 260 47.3
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 2.9e-38 162.9 239 49.0
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 1.9e-37 160.2 233 50.6
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 3.3e-37 159.5 105 76.2
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 3.3e-37 159.5 105 76.2
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 3.3e-37 159.5 215 51.6
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 9.5e-37 157.9 145 60.7
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 2.1e-36 156.8 184 56.5
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 4.7e-36 155.6 246 45.1
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 1.0e-35 154.5 240 46.2
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 3.0e-35 152.9 214 51.4
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 1.2e-34 151.0 238 42.0
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 4.4e-34 149.1 240 43.8
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 4.4e-34 149.1 240 45.8
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 2.9e-33 146.4 126 63.5
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 2.9e-33 146.4 126 63.5
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 2.9e-33 146.4 145 55.9
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 3.7e-33 146.0 126 63.5
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 4.9e-33 145.6 208 48.1
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 4.9e-33 145.6 240 46.7
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 1.4e-32 144.1 114 64.0
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 1.4e-32 144.1 114 64.0
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 1.4e-32 144.1 114 64.0
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 1.4e-32 144.1 114 64.0
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 1.8e-32 143.7 240 42.9
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 2.4e-32 143.3 238 44.5
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 7.0e-32 141.7 241 45.2
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 9.2e-32 141.4 156 59.6
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 2.0e-31 140.2 165 56.4
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 2.3e-30 136.7 240 43.3
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 3.9e-30 136.0 163 53.4
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 5.6e-29 132.1 232 43.1
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 1.2e-28 131.0 163 50.3
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 3.1e-27 126.3 138 53.6
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 2.0e-23 113.6 178 46.1
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 7.8e-23 111.7 83 66.3
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 3.2e-16 89.7 181 39.8
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 1.6e-15 87.4 195 35.9
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 7.3e-13 78.6 164 42.7
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 9.9e-10 68.2 115 41.7
Lsat_1_v5_gn_7_113640 Lactuca sativa HOM05D007823 ORTHO05D000174 7.1e-08 62.0 55 56.4
Mapoly0147s0009 Marchantia polymorpha HOM05D007292 ORTHO05D009084 7.8e-07 58.5 85 40.0


User provided reference genes

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