Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 1.7e-46 189.1 107 100.0
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 1.9e-29 132.5 107 79.4
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 2.3e-22 109.0 108 59.3
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 3.0e-22 108.6 107 60.7
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.1e-20 102.4 108 54.6
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 2.1e-20 102.4 109 57.8
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 2.8e-20 102.1 110 56.4
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.8e-20 102.1 108 54.6
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.8e-20 102.1 106 53.8
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 3.7e-20 101.7 104 55.8
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 4.8e-20 101.3 108 54.6
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 6.2e-20 100.9 108 54.6
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 6.2e-20 100.9 109 56.0
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 1.1e-19 100.1 109 52.3
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 4.0e-19 98.2 108 55.6
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 4.0e-19 98.2 107 54.2
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 5.3e-19 97.8 107 54.2
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 9.0e-19 97.1 107 52.3
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 2.6e-18 95.5 108 50.9
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 4.5e-18 94.7 106 51.9
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 5.8e-18 94.4 109 58.7
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 7.6e-18 94.0 107 57.0
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 7.6e-18 94.0 95 65.3
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 9.9e-18 93.6 107 54.2
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 9.9e-18 93.6 108 51.9
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 9.9e-18 93.6 108 51.9
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.3e-17 93.2 108 51.9
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 1.3e-17 93.2 108 51.9
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 1.3e-17 93.2 106 51.9
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 1.7e-17 92.8 108 50.9
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.7e-17 92.8 106 53.8
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 2.9e-17 92.0 102 52.9
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 2.9e-17 92.0 108 53.7
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 2.9e-17 92.0 106 52.8
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 2.9e-17 92.0 107 54.2
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 3.8e-17 91.7 108 50.9
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 4.9e-17 91.3 106 55.7
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 4.9e-17 91.3 108 51.9
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 4.9e-17 91.3 107 53.3
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 6.4e-17 90.9 109 50.5
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 6.4e-17 90.9 111 50.5
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 8.4e-17 90.5 107 53.3
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 1.1e-16 90.1 88 60.2
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 1.1e-16 90.1 108 51.9
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 1.4e-16 89.7 108 51.9
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 1.4e-16 89.7 109 51.4
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 1.9e-16 89.4 106 54.7
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 1.9e-16 89.4 111 53.2
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.2e-16 88.6 95 63.2
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 4.2e-16 88.2 108 50.9
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 4.2e-16 88.2 108 51.9
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 4.2e-16 88.2 108 51.9
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 7.1e-16 87.4 112 50.0
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 7.1e-16 87.4 108 52.8
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 7.1e-16 87.4 111 50.5
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 9.3e-16 87.0 117 46.2
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 1.2e-15 86.7 107 52.3
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 1.2e-15 86.7 118 47.5
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 1.6e-15 86.3 109 51.4
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 1.6e-15 86.3 94 53.2
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 1.6e-15 86.3 107 50.5
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 2.1e-15 85.9 107 48.6
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 2.1e-15 85.9 109 51.4
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 2.1e-15 85.9 88 59.1
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 2.7e-15 85.5 108 47.2
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 2.7e-15 85.5 108 50.9
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 3.5e-15 85.1 86 59.3
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 6.0e-15 84.3 108 52.8
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 7.9e-15 84.0 109 47.7
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 2.3e-14 82.4 107 50.5
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 2.3e-14 82.4 111 48.6
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 3.9e-14 81.6 107 51.4
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 3.9e-14 81.6 109 49.5
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 3.9e-14 81.6 71 57.7
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 5.1e-14 81.3 112 49.1
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 5.1e-14 81.3 110 51.8
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 5.1e-14 81.3 106 50.9
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 5.1e-14 81.3 86 51.2
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 6.7e-14 80.9 107 50.5
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 8.7e-14 80.5 101 45.5
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 8.7e-14 80.5 109 47.7
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 1.5e-13 79.7 102 50.0
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 1.5e-13 79.7 106 47.2
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 1.9e-13 79.3 109 48.6
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 1.9e-13 79.3 109 49.5
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 3.3e-13 78.6 107 48.6
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 4.3e-13 78.2 96 49.0
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 5.6e-13 77.8 110 49.1
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 7.4e-13 77.4 75 53.3
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 1.6e-12 76.3 106 48.1
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 1.6e-12 76.3 108 45.4
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 1.6e-12 76.3 129 43.4
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 2.8e-12 75.5 100 44.0
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 2.8e-12 75.5 109 45.0
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.7e-12 75.1 52 67.3
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 8.2e-12 73.9 110 45.5
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 1.8e-11 72.8 62 59.7
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 3.1e-11 72.0 107 54.2
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 4.0e-11 71.6 107 54.2
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 1.2e-10 70.1 62 51.6
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 1.5e-10 69.7 112 54.5
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 1.5e-10 69.7 86 40.7
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.4e-10 68.6 50 68.0
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 7.6e-10 67.4 110 40.9
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 1.7e-09 66.2 85 48.2
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 2.9e-09 65.5 61 60.7
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 6.5e-09 64.3 61 59.0
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 8.4e-09 63.9 67 52.2
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 1.4e-08 63.2 110 50.0
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 2.5e-08 62.4 68 51.5


User provided reference genes

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