Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p062957 Quercus lobata HOM05D000021 ORTHO05D014900 1.8e-51 205.7 108 100.0
QL08p062967 Quercus lobata HOM05D000021 ORTHO05D000010 3.3e-37 158.3 107 77.6
QL08p060205 Quercus lobata HOM05D000021 ORTHO05D000010 1.3e-28 129.8 107 65.4
QL03p070905 Quercus lobata HOM05D000021 ORTHO05D000010 1.7e-28 129.4 107 65.4
QL08p060521 Quercus lobata HOM05D000021 ORTHO05D000010 2.2e-28 129.0 107 65.4
QL08p062868 Quercus lobata HOM05D000021 ORTHO05D000010 3.7e-28 128.3 107 63.6
QL08p062904 Quercus lobata HOM05D000021 ORTHO05D000010 1.8e-27 125.9 103 65.0
QL08p060570 Quercus lobata HOM05D000021 ORTHO05D000010 2.0e-26 122.5 106 63.2
QL04p065292 Quercus lobata HOM05D000021 ORTHO05D000010 1.3e-25 119.8 104 63.5
QL03p000683 Quercus lobata HOM05D000021 ORTHO05D000010 6.5e-25 117.5 101 62.4
QL09p049222 Quercus lobata HOM05D000021 ORTHO05D000010 6.5e-25 117.5 106 62.3
QL08p061571 Quercus lobata HOM05D000021 ORTHO05D000010 8.5e-25 117.1 103 63.1
QL11p022980 Quercus lobata HOM05D000021 ORTHO05D000010 1.1e-24 116.7 104 62.5
QL09p049326 Quercus lobata HOM05D000021 ORTHO05D000010 5.5e-24 114.4 102 63.7
QL08p061625 Quercus lobata HOM05D000021 ORTHO05D000010 9.4e-24 113.6 102 62.7
QL08p062910 Quercus lobata HOM05D000021 ORTHO05D000010 9.4e-24 113.6 106 59.4
QL08p061607 Quercus lobata HOM05D000021 ORTHO05D000010 1.2e-23 113.2 102 63.7
QL08p063138 Quercus lobata HOM05D000021 ORTHO05D014900 4.7e-23 111.3 104 59.6
QL08p061542 Quercus lobata HOM05D000021 ORTHO05D000010 5.1e-22 107.8 102 58.8
QL08p062784 Quercus lobata HOM05D000021 ORTHO05D000010 2.2e-17 92.4 98 51.0
QL04p089423 Quercus lobata HOM05D000021 ORTHO05D000010 6.5e-17 90.9 108 44.4
QL08p062836 Quercus lobata HOM05D000021 ORTHO05D014900 6.5e-17 90.9 98 50.0
QL04p089332 Quercus lobata HOM05D000021 ORTHO05D000010 8.5e-17 90.5 109 46.8
QL08p062915 Quercus lobata HOM05D000021 ORTHO05D000010 1.1e-16 90.1 98 51.0
QL04p089833 Quercus lobata HOM05D000021 ORTHO05D000010 1.9e-16 89.4 108 46.3
QL04p089985 Quercus lobata HOM05D000021 ORTHO05D000010 3.2e-16 88.6 108 47.2
QL04p062360 Quercus lobata HOM05D000021 ORTHO05D000010 5.5e-16 87.8 104 47.1
QL04p089659 Quercus lobata HOM05D000021 ORTHO05D000010 9.4e-16 87.0 108 44.4
QL04p089501 Quercus lobata HOM05D000021 ORTHO05D000010 1.6e-15 86.3 108 43.5
QL04p089963 Quercus lobata HOM05D000021 ORTHO05D000010 4.7e-15 84.7 108 44.4
CiPaw.09G088800 Carya illinoinensis HOM05D000021 ORTHO05D000010 1.0e-14 83.6 108 46.3
Manes.18G127600 Manihot esculenta HOM05D000021 ORTHO05D000010 1.8e-14 82.8 97 49.5
QL04p095240 Quercus lobata HOM05D000021 ORTHO05D000010 1.8e-14 82.8 101 46.5
Cfa001338 Carpinus fangiana HOM05D000021 ORTHO05D014900 5.2e-14 81.3 105 44.8
Manes.18G127100 Manihot esculenta HOM05D000021 ORTHO05D000010 8.8e-14 80.5 97 48.5
QL04p088568 Quercus lobata HOM05D000021 ORTHO05D000010 1.1e-13 80.1 107 43.9
QL04p089013 Quercus lobata HOM05D000021 ORTHO05D000010 1.5e-13 79.7 110 41.8
QL09p003453 Quercus lobata HOM05D000021 ORTHO05D000010 2.0e-13 79.3 104 46.2
QL04p089571 Quercus lobata HOM05D000021 ORTHO05D000010 4.4e-13 78.2 108 42.6
QL12p007509 Quercus lobata HOM05D000021 ORTHO05D014900 7.4e-13 77.4 91 50.5
CiPaw.02G190300 Carya illinoinensis HOM05D000021 ORTHO05D000010 2.2e-12 75.9 100 43.0
CiPaw.05G135900 Carya illinoinensis HOM05D000021 ORTHO05D000010 3.7e-12 75.1 113 44.2
Manes.04G110442 Manihot esculenta HOM05D000021 ORTHO05D000010 4.8e-12 74.7 97 42.3
Manes.04G110590 Manihot esculenta HOM05D000021 ORTHO05D000010 6.3e-12 74.3 97 41.2
QL04p089050 Quercus lobata HOM05D000021 ORTHO05D000010 1.4e-11 73.2 111 41.4
Manes.18G127654 Manihot esculenta HOM05D000021 ORTHO05D000010 1.8e-11 72.8 100 47.0
Manes.11G121400 Manihot esculenta HOM05D000021 ORTHO05D000010 3.1e-11 72.0 100 40.0
CANSAT78G0064 Cannabis sativa HOM05D000021 ORTHO05D000010 7.0e-11 70.9 103 44.7
Cfa001339 Carpinus fangiana HOM05D000021 ORTHO05D014900 9.1e-11 70.5 63 52.4
Cc11_g01600 Coffea canephora HOM05D000021 ORTHO05D000010 1.6e-10 69.7 103 39.8
Manes.11G122200 Manihot esculenta HOM05D000021 ORTHO05D000010 1.6e-10 69.7 101 39.6
RcHm_v2.0_Chr1g0370261 Rosa chinensis HOM05D000021 ORTHO05D000010 1.6e-10 69.7 108 39.8
Manes.18G124300 Manihot esculenta HOM05D000021 ORTHO05D000010 2.0e-10 69.3 100 46.0
RcHm_v2.0_Chr1g0370281 Rosa chinensis HOM05D000021 ORTHO05D000010 2.0e-10 69.3 108 39.8
Manes.07G127100 Manihot esculenta HOM05D000021 ORTHO05D000010 2.6e-10 68.9 99 43.4
FAN10G1308 Fragaria x ananassa HOM05D000021 ORTHO05D000010 7.7e-10 67.4 102 42.2
RcHm_v2.0_Chr1g0351981 Rosa chinensis HOM05D000021 ORTHO05D000010 7.7e-10 67.4 101 41.6
Actinidia23111 Actinidia chinensis HOM05D000021 ORTHO05D000010 1.0e-09 67.0 101 44.6
Manes.11G058900 Manihot esculenta HOM05D000021 ORTHO05D000010 1.0e-09 67.0 96 39.6
FvH4_7g24151 Fragaria vesca HOM05D000021 ORTHO05D000010 1.3e-09 66.6 100 43.0
FAN06G1757 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.3e-09 66.6 99 40.4
FAN06G4571 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.3e-09 66.6 100 43.0
Cc08_g08650 Coffea canephora HOM05D000021 ORTHO05D000010 2.2e-09 65.9 96 38.5
FvH4_7g24240 Fragaria vesca HOM05D000021 ORTHO05D000010 2.2e-09 65.9 99 39.4
FvH4_7g24242 Fragaria vesca HOM05D000021 ORTHO05D000010 2.2e-09 65.9 99 39.4
Cfa001340 Carpinus fangiana HOM05D000021 ORTHO05D014900 3.8e-09 65.1 62 50.0
Haze_17211 Corylus avellana HOM05D000021 ORTHO05D000010 3.8e-09 65.1 86 44.2
FvH4_7g29910 Fragaria vesca HOM05D000021 ORTHO05D000010 3.8e-09 65.1 108 39.8
FAN06G0277 Fragaria x ananassa HOM05D000021 ORTHO05D000010 3.8e-09 65.1 108 39.8
FAN06G4510 Fragaria x ananassa HOM05D000021 ORTHO05D000010 3.8e-09 65.1 108 39.8
FAN03G0659 Fragaria x ananassa HOM05D000021 ORTHO05D000010 5.0e-09 64.7 99 39.4
FAN10G3400 Fragaria x ananassa HOM05D000021 ORTHO05D000010 6.5e-09 64.3 92 44.6
Manes.04G110470 Manihot esculenta HOM05D000021 ORTHO05D000010 6.5e-09 64.3 96 39.6
RcHm_v2.0_Chr1g0345151 Rosa chinensis HOM05D000021 ORTHO05D000010 1.1e-08 63.5 101 38.6
FvH4_7g24243 Fragaria vesca HOM05D000021 ORTHO05D000010 1.5e-08 63.2 102 40.2
CANSAT35G1167 Cannabis sativa HOM05D000021 ORTHO05D000010 1.9e-08 62.8 102 39.2
FAN03G0423 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.9e-08 62.8 94 42.6
FAN03G3403 Fragaria x ananassa HOM05D000021 ORTHO05D000010 1.9e-08 62.8 107 39.3
Manes.04G110563 Manihot esculenta HOM05D000021 ORTHO05D000010 1.9e-08 62.8 97 38.1
Nn2g13677 Nelumbo nucifera HOM05D000021 ORTHO05D000010 2.5e-08 62.4 98 42.9
RcHm_v2.0_Chr1g0369841 Rosa chinensis HOM05D000021 ORTHO05D000010 2.5e-08 62.4 106 39.6
FAN12G2847 Fragaria x ananassa HOM05D000021 ORTHO05D000010 3.2e-08 62.0 97 39.2
MBI14_g31919_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 3.2e-08 62.0 103 37.9
MBI14_g43732_MAGBIO Magnolia biondii HOM05D000908 ORTHO05D000010 3.2e-08 62.0 103 37.9
Psat6g028120 Pisum sativum HOM05D000021 ORTHO05D000010 3.2e-08 62.0 48 62.5
Prupe.2G248300 Prunus persica HOM05D000021 ORTHO05D000010 3.2e-08 62.0 108 36.1
FAN01G1164 Fragaria x ananassa HOM05D000021 ORTHO05D000010 4.2e-08 61.6 106 39.6
FAN03G1818 Fragaria x ananassa HOM05D000021 ORTHO05D000010 4.2e-08 61.6 107 38.3
QL04p015696 Quercus lobata HOM05D000021 ORTHO05D000010 4.2e-08 61.6 102 35.3
RcHm_v2.0_Chr1g0346851 Rosa chinensis HOM05D000021 ORTHO05D000010 4.2e-08 61.6 102 42.2
FvH4_7g24510 Fragaria vesca HOM05D000021 ORTHO05D000010 5.5e-08 61.2 110 36.4
FAN01G2754 Fragaria x ananassa HOM05D000021 ORTHO05D000010 5.5e-08 61.2 85 44.7
FAN06G0119 Fragaria x ananassa HOM05D000021 ORTHO05D000010 5.5e-08 61.2 110 36.4
FAN06G4437 Fragaria x ananassa HOM05D000021 ORTHO05D000010 5.5e-08 61.2 110 36.4
FAN10G0830 Fragaria x ananassa HOM05D000021 ORTHO05D000010 7.2e-08 60.8 108 36.1
RcHm_v2.0_Chr5g0076391 Rosa chinensis HOM05D000021 ORTHO05D000010 7.2e-08 60.8 105 39.0
Manes.04G110509 Manihot esculenta HOM05D000021 ORTHO05D000010 1.2e-07 60.1 96 38.5
TAR633G0408 Trochodendron aralioides HOM05D000021 ORTHO05D000010 1.2e-07 60.1 100 37.0
Nn1g07912 Nelumbo nucifera HOM05D000021 ORTHO05D000010 1.6e-07 59.7 100 35.0
QL03p043205 Quercus lobata HOM05D000021 ORTHO05D014900 1.6e-07 59.7 77 44.2
Cfa001335 Carpinus fangiana HOM05D000021 ORTHO05D014900 2.1e-07 59.3 55 50.9
Ca_25061_v3 Cicer arietinum L. HOM05D000021 ORTHO05D000010 2.1e-07 59.3 97 38.1
Medtr5g019070 Medicago truncatula HOM05D000021 ORTHO05D000010 2.1e-07 59.3 103 35.0
Medtr5g044680 Medicago truncatula HOM05D000021 ORTHO05D000010 2.1e-07 59.3 97 35.1
FAN18G2523 Fragaria x ananassa HOM05D000021 ORTHO05D000010 2.7e-07 58.9 99 38.4
Lj2g0016215 Lotus japonicus HOM05D000021 ORTHO05D000010 2.7e-07 58.9 97 41.2
Ca_25058_v3 Cicer arietinum L. HOM05D000021 ORTHO05D000010 3.6e-07 58.5 100 37.0
Nn1g02071 Nelumbo nucifera HOM05D000021 ORTHO05D000010 3.6e-07 58.5 104 31.7
FAN01G1107 Fragaria x ananassa HOM05D000021 ORTHO05D000010 4.7e-07 58.2 103 36.9
Lj4g0011925 Lotus japonicus HOM05D000021 ORTHO05D000010 4.7e-07 58.2 96 40.6
RcHm_v2.0_Chr1g0369931 Rosa chinensis HOM05D000021 ORTHO05D000010 4.7e-07 58.2 101 38.6
Thecc.09G303500 Theobroma cacao HOM05D000021 ORTHO05D000010 6.1e-07 57.8 102 32.4
CANSAT35G2045 Cannabis sativa HOM05D000021 ORTHO05D000010 8.0e-07 57.4 102 38.2
CiPaw.14G109100 Carya illinoinensis HOM05D000021 ORTHO05D000010 8.0e-07 57.4 102 38.2
Gorai.009G092700 Gossypium raimondii HOM05D000021 ORTHO05D047611 8.0e-07 57.4 102 31.4
Medtr8g071950 Medicago truncatula HOM05D000021 ORTHO05D016122 8.0e-07 57.4 96 37.5
arahy.Tifrunner.gnm1.ann1.6XQE5A Arachis hypogaea HOM05D000021 ORTHO05D014900 1.0e-06 57.0 77 41.6
FvH4_5g31631 Fragaria vesca HOM05D000021 ORTHO05D014900 1.0e-06 57.0 93 39.8
Lj2g0005150 Lotus japonicus HOM05D000021 ORTHO05D000010 1.0e-06 57.0 43 58.1
Lj2g0009506 Lotus japonicus HOM05D000021 ORTHO05D000010 1.0e-06 57.0 94 38.3
Medtr5g026000 Medicago truncatula HOM05D000021 ORTHO05D000010 1.0e-06 57.0 101 36.6
Medtr8g068540 Medicago truncatula HOM05D000021 ORTHO05D000010 1.0e-06 57.0 95 36.8
Nn2g11444 Nelumbo nucifera HOM05D000021 ORTHO05D000010 1.0e-06 57.0 103 35.0
QL09p051572 Quercus lobata HOM05D000021 ORTHO05D000010 1.0e-06 57.0 103 36.9
MBI14_g24728_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 1.4e-06 56.6 55 47.3
MD12G1134500 Malus domestica HOM05D000021 ORTHO05D000010 1.4e-06 56.6 100 37.0
QL04p017133 Quercus lobata HOM05D000021 ORTHO05D000010 1.4e-06 56.6 103 35.9
TAR624G1213 Trochodendron aralioides HOM05D000021 ORTHO05D000010 1.4e-06 56.6 99 35.4
vmacro10334 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 1.4e-06 56.6 99 35.4
Glyma.09G217200 Glycine max HOM05D000021 ORTHO05D000010 1.8e-06 56.2 96 35.4
RcHm_v2.0_Chr6g0248051 Rosa chinensis HOM05D000021 ORTHO05D000010 1.8e-06 56.2 102 38.2
TAR633G1557 Trochodendron aralioides HOM05D000021 ORTHO05D000010 1.8e-06 56.2 96 37.5
Dinv34399 Davidia involucrata HOM05D000021 ORTHO05D012915 2.3e-06 55.8 92 34.8
FvH4_7g24920 Fragaria vesca HOM05D000021 ORTHO05D000010 2.3e-06 55.8 103 35.9
MBI14_g24233_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 2.3e-06 55.8 55 45.5
MBI14_g29545_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 2.3e-06 55.8 101 36.6
Manes.10G016000 Manihot esculenta HOM05D000021 ORTHO05D000010 2.3e-06 55.8 94 36.2
Medtr5g026010 Medicago truncatula HOM05D000021 ORTHO05D000010 2.3e-06 55.8 101 36.6
TPR.G8106 Trifolium pratense HOM05D000021 ORTHO05D000010 2.3e-06 55.8 93 39.8
arahy.Tifrunner.gnm1.ann1.B30Q1Q Arachis hypogaea HOM05D000021 ORTHO05D000010 3.0e-06 55.5 95 36.8
CSS0043706 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 3.0e-06 55.5 101 32.7
CiPaw.14G109500 Carya illinoinensis HOM05D000021 ORTHO05D000010 4.0e-06 55.1 41 58.5
Ca_25056_v3 Cicer arietinum L. HOM05D000021 ORTHO05D000010 4.0e-06 55.1 102 37.3
Glyma.03G096600 Glycine max HOM05D000021 ORTHO05D000010 4.0e-06 55.1 42 59.5
Glyma.04G123166 Glycine max HOM05D000021 ORTHO05D000010 4.0e-06 55.1 93 43.0
Lalb_Chr20g0108691 Lupinus albus HOM05D000021 ORTHO05D000010 4.0e-06 55.1 97 38.1
MBI14_g16688_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 4.0e-06 55.1 103 35.9
Medtr5g025880 Medicago truncatula HOM05D002505 ORTHO05D007115 4.0e-06 55.1 48 54.2
Psat2g144960 Pisum sativum HOM05D000021 ORTHO05D000010 4.0e-06 55.1 96 35.4
QL04p015429 Quercus lobata HOM05D000021 ORTHO05D000010 4.0e-06 55.1 102 34.3
arahy.Tifrunner.gnm1.ann1.PHQ037 Arachis hypogaea HOM05D000021 ORTHO05D000010 5.2e-06 54.7 77 40.3
Ca_25055_v3 Cicer arietinum L. HOM05D000021 ORTHO05D000010 5.2e-06 54.7 96 34.4
Cc00_g12940 Coffea canephora HOM05D000021 ORTHO05D000010 5.2e-06 54.7 78 37.2
FAN01G0213 Fragaria x ananassa HOM05D000021 ORTHO05D000010 5.2e-06 54.7 101 35.6
FAN10G3713 Fragaria x ananassa HOM05D000021 ORTHO05D000010 5.2e-06 54.7 107 37.4
Glyma.02G100500 Glycine max HOM05D000021 ORTHO05D000010 5.2e-06 54.7 93 36.6
Glyma.07G155800 Glycine max HOM05D000021 ORTHO05D000010 5.2e-06 54.7 104 36.5
QL04p015278 Quercus lobata HOM05D000021 ORTHO05D000010 5.2e-06 54.7 102 33.3
QL04p017464 Quercus lobata HOM05D000021 ORTHO05D000010 5.2e-06 54.7 106 35.8
MBI14_g21455_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 6.7e-06 54.3 55 45.5
Medtr5g025840 Medicago truncatula HOM05D000021 ORTHO05D000010 6.7e-06 54.3 68 44.1
Medtr6g036790 Medicago truncatula HOM05D000021 ORTHO05D000010 6.7e-06 54.3 101 35.6
CSS0009110 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 8.8e-06 53.9 101 34.7
FAN01G1213 Fragaria x ananassa HOM05D000021 ORTHO05D000010 8.8e-06 53.9 82 41.5
FAN06G2409 Fragaria x ananassa HOM05D000021 ORTHO05D000010 8.8e-06 53.9 105 36.2
Glyma.09G216400 Glycine max HOM05D000021 ORTHO05D000010 8.8e-06 53.9 41 61.0
MBI14_g20090_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 8.8e-06 53.9 55 45.5
MBI14_g45693_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 8.8e-06 53.9 73 39.7
Medtr5g024420 Medicago truncatula HOM05D000021 ORTHO05D000010 8.8e-06 53.9 41 63.4
Medtr5g024450 Medicago truncatula HOM05D000021 ORTHO05D000010 8.8e-06 53.9 41 63.4
Nn2g13679 Nelumbo nucifera HOM05D000021 ORTHO05D000010 8.8e-06 53.9 93 41.9
Potri.010G228200 Populus trichocarpa HOM05D000021 ORTHO05D000010 8.8e-06 53.9 100 33.0
QL04p015364 Quercus lobata HOM05D000021 ORTHO05D000010 8.8e-06 53.9 102 33.3
QL04p015790 Quercus lobata HOM05D000021 ORTHO05D000010 8.8e-06 53.9 102 33.3
QL04p016781 Quercus lobata HOM05D000021 ORTHO05D000010 8.8e-06 53.9 103 31.1
QL09p052274 Quercus lobata HOM05D000021 ORTHO05D000010 8.8e-06 53.9 102 36.3
RcHm_v2.0_Chr1g0369861 Rosa chinensis HOM05D000021 ORTHO05D000010 8.8e-06 53.9 102 36.3
TAR633G1271 Trochodendron aralioides HOM05D000021 ORTHO05D000010 8.8e-06 53.9 102 31.4


User provided reference genes

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