Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p061268 Quercus lobata HOM05D002414 ORTHO05D002531 2.7e-67 258.5 126 100.0
QL08p061277 Quercus lobata HOM05D002414 ORTHO05D002531 8.4e-24 114.0 114 58.8
QL08p061292 Quercus lobata HOM05D002414 ORTHO05D002531 9.3e-23 110.5 117 56.4
QL08p061313 Quercus lobata HOM05D002414 ORTHO05D002531 1.6e-22 109.8 117 56.4
QL08p061332 Quercus lobata HOM05D002414 ORTHO05D002531 2.5e-20 102.4 123 50.4
CiPaw.01G291400 Carya illinoinensis HOM05D002414 ORTHO05D002531 2.2e-16 89.4 129 42.6
CiPaw.02G186500 Carya illinoinensis HOM05D002414 ORTHO05D002531 8.4e-16 87.4 129 43.4
Cfa001425 Carpinus fangiana HOM05D002414 ORTHO05D002531 7.1e-15 84.3 107 50.5
Prupe.2G239800 Prunus persica HOM05D002414 ORTHO05D002531 7.9e-14 80.9 131 38.2
ClCG07G003590 Citrullus lanatus HOM05D002414 ORTHO05D002531 2.3e-13 79.3 115 43.5
Manes.10G026300 Manihot esculenta HOM05D002414 ORTHO05D002531 3.3e-12 75.5 113 41.6
CsaV3_5G008390 Cucumis sativus L. HOM05D002414 ORTHO05D002531 9.6e-12 73.9 105 44.8
MELO3C023887.2 Cucumis melo HOM05D002414 ORTHO05D002531 1.3e-11 73.6 105 43.8
Sed0012358 Sechium edule HOM05D002414 ORTHO05D002531 2.1e-11 72.8 105 44.8
Gorai.011G268300 Gossypium raimondii HOM05D002414 ORTHO05D002531 6.2e-11 71.2 107 43.0
Nn2g13475 Nelumbo nucifera HOM05D002414 ORTHO05D002531 8.1e-11 70.9 94 41.5
BolC4t28252H Brassica oleracea HOM05D002414 ORTHO05D002531 1.1e-10 70.5 125 36.0
Ciclev10031537m.g Citrus clementina HOM05D002414 ORTHO05D002531 1.1e-10 70.5 75 50.7
Dinv26046 Davidia involucrata HOM05D002414 ORTHO05D002531 1.1e-10 70.5 113 37.2
Gohir.D10G234700 Gossypium hirsutum HOM05D002414 ORTHO05D002531 1.1e-10 70.5 116 42.2
Lalb_Chr18g0053061 Lupinus albus HOM05D002414 ORTHO05D002531 1.1e-10 70.5 114 37.7
BcaC02g07434 Brassica carinata HOM05D002414 ORTHO05D002531 1.4e-10 70.1 96 39.6
C04p67550 Brassica napus HOM05D002414 ORTHO05D002531 1.4e-10 70.1 96 39.6
Cc02_g07420 Coffea canephora HOM05D002414 ORTHO05D002531 1.8e-10 69.7 117 34.2
Thecc.10G039300 Theobroma cacao HOM05D002414 ORTHO05D002531 1.8e-10 69.7 106 39.6
TAR369G0879 Trochodendron aralioides HOM05D002414 ORTHO05D002531 1.8e-10 69.7 89 41.6
Thhalv10016564m.g Eutrema salsugineum HOM05D002414 ORTHO05D002531 2.4e-10 69.3 94 41.5
A04p30290 Brassica napus HOM05D002414 ORTHO05D002531 3.1e-10 68.9 125 35.2
BraA04t18478Z Brassica rapa HOM05D002414 ORTHO05D002531 3.1e-10 68.9 125 35.2
Lalb_Chr15g0084551 Lupinus albus HOM05D002414 ORTHO05D002531 3.1e-10 68.9 105 41.0
CARHR134590 Cardamine hirsuta HOM05D002414 ORTHO05D002531 4.0e-10 68.6 104 37.5
Duzib106G1475 Durio zibethinus HOM05D002414 ORTHO05D002531 4.0e-10 68.6 78 50.0
Sp4g22010 Schrenkiella parvula HOM05D002414 ORTHO05D002531 4.0e-10 68.6 96 40.6
Gohir.A10G222401 Gossypium hirsutum HOM05D002414 ORTHO05D002531 5.3e-10 68.2 116 42.2
Peaxi162Scf00658g00422 Petunia axillaris HOM05D002414 ORTHO05D002531 5.3e-10 68.2 102 39.2
Psat0s4218g0040 Pisum sativum HOM05D002414 ORTHO05D002531 5.3e-10 68.2 110 37.3
FAN10G1514 Fragaria x ananassa HOM05D002414 ORTHO05D002531 9.0e-10 67.4 70 51.4
FAN10G3047 Fragaria x ananassa HOM05D002414 ORTHO05D002531 9.0e-10 67.4 70 51.4
Aa31LG5G19900 Aethionema arabicum HOM05D002414 ORTHO05D002531 1.2e-09 67.0 91 38.5
BcaB06g29102 Brassica carinata HOM05D002414 ORTHO05D002531 1.2e-09 67.0 94 40.4
Actinidia02921 Actinidia chinensis HOM05D002414 ORTHO05D002531 1.5e-09 66.6 114 38.6
THA.LOC104810046 Tarenaya hassleriana HOM05D002414 ORTHO05D002531 1.5e-09 66.6 74 48.6
Potri.010G199500 Populus trichocarpa HOM05D002414 ORTHO05D002531 2.0e-09 66.2 89 43.8
Phvul.001G236100 Phaseolus vulgaris HOM05D002414 ORTHO05D002531 2.6e-09 65.9 117 35.9
RcHm_v2.0_Chr1g0368321 Rosa chinensis HOM05D002414 ORTHO05D002531 2.6e-09 65.9 110 42.7
Haze_17118 Corylus avellana HOM05D002414 ORTHO05D002531 3.4e-09 65.5 89 47.2
FvH4_7g23071 Fragaria vesca HOM05D002414 ORTHO05D002531 3.4e-09 65.5 132 34.1
RcHm_v2.0_Chr1g0368311 Rosa chinensis HOM05D002414 ORTHO05D002531 3.4e-09 65.5 69 50.7
arahy.Tifrunner.gnm1.ann1.8S2BPT Arachis hypogaea HOM05D002414 ORTHO05D002531 4.5e-09 65.1 106 41.5
GSVIVG01016481001 Vitis vinifera HOM05D002414 ORTHO05D002531 5.8e-09 64.7 102 39.2
CAN.G608.2 Capsicum annuum HOM05D002414 ORTHO05D002531 7.6e-09 64.3 102 39.2
Sed0020180 Sechium edule HOM05D002414 ORTHO05D002531 1.3e-08 63.5 94 39.4
VMungo1383G2026 Vigna mungo HOM05D002414 ORTHO05D002531 1.3e-08 63.5 113 36.3
Aqoxy2G02338 Aquilegia oxysepala HOM05D002414 ORTHO05D002531 1.7e-08 63.2 102 40.2
Aa31LG5G19910 Aethionema arabicum HOM05D002414 ORTHO05D002531 2.2e-08 62.8 119 34.5
Dinv16252 Davidia involucrata HOM05D002414 ORTHO05D002531 2.2e-08 62.8 74 45.9
FAN01G1411 Fragaria x ananassa HOM05D002414 ORTHO05D002531 2.2e-08 62.8 69 49.3
FAN06G1258 Fragaria x ananassa HOM05D002414 ORTHO05D002531 2.2e-08 62.8 69 49.3
Eucgr.G02961 Eucalyptus grandis HOM05D002414 ORTHO05D002531 4.9e-08 61.6 89 40.4
Glyma.18G034900 Glycine max HOM05D002414 ORTHO05D002531 4.9e-08 61.6 118 34.7
TAR623G1792 Trochodendron aralioides HOM05D002414 ORTHO05D002531 6.4e-08 61.2 89 39.3
FAN03G1385 Fragaria x ananassa HOM05D002414 ORTHO05D002531 8.4e-08 60.8 69 47.8
MD01G1139300 Malus domestica HOM05D002414 ORTHO05D002531 1.1e-07 60.5 112 42.0
Carub.0004s2180 Capsella rubella HOM05D002414 ORTHO05D002531 1.4e-07 60.1 94 36.2
PGR142G0412 Punica granatum HOM05D002414 ORTHO05D002531 1.4e-07 60.1 86 43.0
ECA233G4115 Erigeron canadensis HOM05D002414 ORTHO05D002531 1.9e-07 59.7 116 37.1
FvH4_7g23070 Fragaria vesca HOM05D002414 ORTHO05D002531 1.9e-07 59.7 107 41.1
Medtr3g068215 Medicago truncatula HOM05D002414 ORTHO05D002531 1.9e-07 59.7 86 41.9
Solyc06g051790.4 Solanum lycopersicum HOM05D002414 ORTHO05D002531 1.9e-07 59.7 102 37.3
Sopen06g017790 Solanum pennellii HOM05D002414 ORTHO05D002531 1.9e-07 59.7 102 37.3
arahy.Tifrunner.gnm1.ann1.AGZ93U Arachis hypogaea HOM05D002414 ORTHO05D002531 2.4e-07 59.3 77 45.5
CANSAT56G0766 Cannabis sativa HOM05D002414 ORTHO05D002531 2.4e-07 59.3 105 37.1
PSO339G1200 Papaver somniferum HOM05D002414 ORTHO05D002531 2.4e-07 59.3 77 40.3
FAN01G0953 Fragaria x ananassa HOM05D002414 ORTHO05D002531 3.2e-07 58.9 107 40.2
FAN01G2131 Fragaria x ananassa HOM05D002414 ORTHO05D002531 3.2e-07 58.9 107 40.2
FAN06G0979 Fragaria x ananassa HOM05D002414 ORTHO05D002531 3.2e-07 58.9 107 40.2
FAN06G1983 Fragaria x ananassa HOM05D002414 ORTHO05D002531 3.2e-07 58.9 107 40.2
Atru.chr12.362 Acer truncatum HOM05D002414 ORTHO05D002531 4.2e-07 58.5 104 41.3
Atru.chr12.379 Acer truncatum HOM05D002414 ORTHO05D002531 4.2e-07 58.5 104 41.3
EL10Ac2g04700 Beta vulgaris HOM05D002414 ORTHO05D002531 4.2e-07 58.5 75 42.7
Glyma.11G222700 Glycine max HOM05D002414 ORTHO05D002531 4.2e-07 58.5 106 37.7
Ca_08189_v3 Cicer arietinum L. HOM05D002414 ORTHO05D002531 5.5e-07 58.2 97 40.2
Lj6g0023303 Lotus japonicus HOM05D002414 ORTHO05D002531 5.5e-07 58.2 78 42.3
PSO513G0013 Papaver somniferum HOM05D002414 ORTHO05D002531 9.3e-07 57.4 77 39.0
Sc11g0007710 Simmondsia chinensis HOM05D002414 ORTHO05D002531 9.3e-07 57.4 73 42.5
AUR62012137 Chenopodium quinoa HOM05D002414 ORTHO05D002531 2.7e-06 55.8 89 40.4
COL.COLO4_25492 Corchorus olitorius HOM05D002414 ORTHO05D002531 4.6e-06 55.1 78 42.3
AUR62040698 Chenopodium quinoa HOM05D002414 ORTHO05D002531 6.0e-06 54.7 93 37.6
Oeu039015.1 Olea europaea HOM05D002414 ORTHO05D002531 6.0e-06 54.7 126 30.2
PSO339G0723 Papaver somniferum HOM05D002414 ORTHO05D002531 6.0e-06 54.7 78 38.5
HanXRQChr08g0221161 Helianthus annuus HOM05D002414 ORTHO05D002531 7.9e-06 54.3 93 39.8


User provided reference genes

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