Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p060780 Quercus lobata HOM05D000097 ORTHO05D009232 5.6e-124 447.6 219 100.0
QL04p043907 Quercus lobata HOM05D000097 ORTHO05D009232 6.1e-46 188.3 103 88.3
QL04p078301 Quercus lobata HOM05D000097 ORTHO05D009232 4.8e-43 178.7 199 52.3
Cfa015092 Carpinus fangiana HOM05D000097 ORTHO05D009232 1.6e-25 120.6 181 39.8
Haze_02571 Corylus avellana HOM05D000097 ORTHO05D009232 1.9e-23 113.6 180 38.3
Cfa012991 Carpinus fangiana HOM05D000097 ORTHO05D009232 7.2e-23 111.7 206 36.4
Cfa011094 Carpinus fangiana HOM05D000097 ORTHO05D009232 2.1e-22 110.2 181 35.9
Haze_01722 Corylus avellana HOM05D000097 ORTHO05D009232 2.7e-22 109.8 192 36.5
QL04p078372 Quercus lobata HOM05D000097 ORTHO05D009232 1.7e-19 100.5 90 56.7
Cfa011097 Carpinus fangiana HOM05D000097 ORTHO05D009232 1.3e-16 90.9 182 31.9
FAN04G0035 Fragaria x ananassa HOM05D000097 ORTHO05D009232 5.0e-16 89.0 197 32.0
QL04p044640 Quercus lobata HOM05D000097 ORTHO05D009232 8.5e-16 88.2 88 51.1
FAN02G3279 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.9e-15 87.0 153 32.7
CiPaw.12G014700 Carya illinoinensis HOM05D000097 ORTHO05D009232 2.5e-15 86.7 80 51.2
FAN14G3669 Fragaria x ananassa HOM05D000097 ORTHO05D000041 7.2e-15 85.1 155 36.1
FvH4_6g44620 Fragaria vesca HOM05D000097 ORTHO05D009232 1.2e-14 84.3 164 34.1
FvH4_6g44572 Fragaria vesca HOM05D000097 ORTHO05D009232 2.8e-14 83.2 144 33.3
Cfa010359 Carpinus fangiana HOM05D000097 ORTHO05D009232 8.0e-14 81.6 82 50.0
FvH4_5g19322 Fragaria vesca HOM05D000097 ORTHO05D009232 1.0e-13 81.3 87 47.1
Cfa017761 Carpinus fangiana HOM05D024057 ORTHO05D009232 1.4e-13 80.9 80 46.2
Haze_02556 Corylus avellana HOM05D000097 ORTHO05D009232 1.4e-13 80.9 103 44.7
Haze_02559 Corylus avellana HOM05D000097 ORTHO05D009232 1.4e-13 80.9 103 44.7
Haze_02562 Corylus avellana HOM05D000097 ORTHO05D009232 3.0e-13 79.7 173 34.1
QL04p078289 Quercus lobata HOM05D000097 ORTHO05D009232 3.0e-13 79.7 90 45.6
Haze_02792 Corylus avellana HOM05D000097 ORTHO05D009232 5.2e-13 79.0 85 44.7
FAN14G1826 Fragaria x ananassa HOM05D000097 ORTHO05D009232 5.2e-13 79.0 146 33.6
Cfa019375 Carpinus fangiana HOM05D000596 ORTHO05D001497 8.8e-13 78.2 87 43.7
Cfa019379 Carpinus fangiana HOM05D000097 ORTHO05D000041 8.8e-13 78.2 87 43.7
Cfa012990 Carpinus fangiana HOM05D000097 ORTHO05D009232 1.2e-12 77.8 85 44.7
FvH4_6g45154 Fragaria vesca HOM05D000097 ORTHO05D000041 2.0e-12 77.0 175 32.0
Haze_07767 Corylus avellana HOM05D000596 ORTHO05D001497 2.6e-12 76.6 110 38.2
QL04p077954 Quercus lobata HOM05D000097 ORTHO05D009232 4.4e-12 75.9 89 42.7
FvH4_5g36321 Fragaria vesca HOM05D000097 ORTHO05D009232 7.5e-12 75.1 144 33.3
MD09G1088100 Malus domestica HOM05D000097 ORTHO05D000041 7.5e-12 75.1 94 42.6
FvH4_6g44660 Fragaria vesca HOM05D000097 ORTHO05D000041 2.2e-11 73.6 160 33.1
CiPaw.01G096800 Carya illinoinensis HOM05D000097 ORTHO05D009232 2.8e-11 73.2 102 40.2
FAN14G0264 Fragaria x ananassa HOM05D000097 ORTHO05D000041 2.8e-11 73.2 144 34.7
Prupe.4G282500 Prunus persica HOM05D000097 ORTHO05D000041 2.8e-11 73.2 79 45.6
Cfa011240 Carpinus fangiana HOM05D000097 ORTHO05D009232 3.7e-11 72.8 82 45.1
QL02p065412 Quercus lobata HOM05D000097 ORTHO05D009232 3.7e-11 72.8 98 42.9
Cfa000775 Carpinus fangiana HOM05D000097 ORTHO05D009232 4.9e-11 72.4 88 45.5
Prupe.3G237300 Prunus persica HOM05D000097 ORTHO05D000041 6.3e-11 72.0 78 46.2
TWI15G0307 Tripterygium wilfordii HOM05D000097 ORTHO05D000041 8.3e-11 71.6 82 43.9
Prupe.3G237000 Prunus persica HOM05D000097 ORTHO05D009232 1.1e-10 71.2 96 42.7
Prupe.2G080300 Prunus persica HOM05D000097 ORTHO05D000041 1.4e-10 70.9 90 43.3
Thecc.03G016000 Theobroma cacao HOM05D000097 ORTHO05D009232 1.4e-10 70.9 90 43.3
TWI15G0201 Tripterygium wilfordii HOM05D000097 ORTHO05D000041 1.8e-10 70.5 80 42.5
CiPaw.01G097000 Carya illinoinensis HOM05D000097 ORTHO05D000041 2.4e-10 70.1 86 44.2
MD17G1077800 Malus domestica HOM05D000097 ORTHO05D000041 2.4e-10 70.1 94 41.5
MD17G1078100 Malus domestica HOM05D000097 ORTHO05D000041 2.4e-10 70.1 94 41.5
Thecc.03G016700 Theobroma cacao HOM05D000097 ORTHO05D009232 3.1e-10 69.7 87 42.5
Thecc.03G017100 Theobroma cacao HOM05D000097 ORTHO05D000041 3.1e-10 69.7 91 41.8
FAN02G1935 Fragaria x ananassa HOM05D000097 ORTHO05D000041 4.1e-10 69.3 100 41.0
FAN09G3828 Fragaria x ananassa HOM05D000442 ORTHO05D001979 5.4e-10 68.9 144 34.0
CiPaw.14G042100 Carya illinoinensis HOM05D000097 ORTHO05D000041 7.0e-10 68.6 80 40.0
Prupe.3G237400 Prunus persica HOM05D000097 ORTHO05D009232 7.0e-10 68.6 82 45.1
Prupe.3G237500 Prunus persica HOM05D000097 ORTHO05D000041 1.2e-09 67.8 78 44.9
RcHm_v2.0_Chr7g0243171 Rosa chinensis HOM05D012044 ORTHO05D009232 1.2e-09 67.8 94 38.3
FAN08G2061 Fragaria x ananassa HOM05D000097 ORTHO05D009232 2.7e-09 66.6 85 40.0
CiPaw.13G052500 Carya illinoinensis HOM05D000097 ORTHO05D000041 4.5e-09 65.9 84 42.9
Haze_02587 Corylus avellana HOM05D000097 ORTHO05D000041 4.5e-09 65.9 96 40.6
FvH4_5g36310 Fragaria vesca HOM05D012044 ORTHO05D009232 4.5e-09 65.9 85 40.0
MD17G1101100 Malus domestica HOM05D000097 ORTHO05D000041 4.5e-09 65.9 96 39.6
Prupe.2G081200 Prunus persica HOM05D000097 ORTHO05D000041 4.5e-09 65.9 227 30.0
Thecc.03G016100 Theobroma cacao HOM05D000097 ORTHO05D000041 4.5e-09 65.9 91 41.8
Haze_02566 Corylus avellana HOM05D000097 ORTHO05D000041 7.8e-09 65.1 87 41.4
MD17G1100900 Malus domestica HOM05D000097 ORTHO05D009232 1.0e-08 64.7 88 43.2
FAN13G0017 Fragaria x ananassa HOM05D000097 ORTHO05D009232 2.9e-08 63.2 87 37.9
CiPaw.01G096900 Carya illinoinensis HOM05D000097 ORTHO05D009232 3.8e-08 62.8 85 42.4
Prupe.2G082100 Prunus persica HOM05D000097 ORTHO05D000041 3.8e-08 62.8 87 41.4
FvH4_6g45153 Fragaria vesca HOM05D000097 ORTHO05D000041 6.6e-08 62.0 139 35.3
FvH4_6g44650 Fragaria vesca HOM05D000097 ORTHO05D009232 8.6e-08 61.6 78 41.0
FAN18G4446 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.1e-07 61.2 150 28.7
TAR625G1425 Trochodendron aralioides HOM05D000097 ORTHO05D000041 1.1e-07 61.2 86 40.7
FAN09G2628 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.5e-07 60.8 90 40.0
Manes.07G088350 Manihot esculenta HOM05D000097 ORTHO05D000041 1.5e-07 60.8 80 42.5
Prupe.2G082900 Prunus persica HOM05D000097 ORTHO05D000041 1.5e-07 60.8 81 43.2
FAN04G1975 Fragaria x ananassa HOM05D001790 ORTHO05D007425 1.9e-07 60.5 91 36.3
RcHm_v2.0_Chr2g0162691 Rosa chinensis HOM05D000097 ORTHO05D009232 2.5e-07 60.1 79 43.0
PSO223G0067 Papaver somniferum HOM05D000097 ORTHO05D009232 3.3e-07 59.7 212 24.1
FAN04G1606 Fragaria x ananassa HOM05D000097 ORTHO05D000041 7.3e-07 58.5 86 36.0
Manes.07G088650 Manihot esculenta HOM05D000097 ORTHO05D000041 7.3e-07 58.5 80 41.2
Haze_01757 Corylus avellana HOM05D000097 ORTHO05D009232 1.6e-06 57.4 58 43.1
Manes.07G088800 Manihot esculenta HOM05D000097 ORTHO05D000041 1.6e-06 57.4 84 38.1
Prupe.2G082800 Prunus persica HOM05D000097 ORTHO05D000041 1.6e-06 57.4 96 37.5
Cfa011242 Carpinus fangiana HOM05D000097 ORTHO05D000041 2.1e-06 57.0 97 35.1
Manes.07G086500 Manihot esculenta HOM05D000097 ORTHO05D000041 2.8e-06 56.6 80 41.2
Dinv25833 Davidia involucrata HOM05D000097 ORTHO05D000041 3.6e-06 56.2 80 42.5
MD03G1133900 Malus domestica HOM05D000097 ORTHO05D000041 4.7e-06 55.8 84 40.5
Manes.07G087101 Manihot esculenta HOM05D000097 ORTHO05D000041 4.7e-06 55.8 80 40.0
Haze_02551 Corylus avellana HOM05D000097 ORTHO05D000041 6.1e-06 55.5 105 38.1
Manes.07G089101 Manihot esculenta HOM05D000097 ORTHO05D009232 8.0e-06 55.1 80 41.2


User provided reference genes

Program Settings