Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p059697 Quercus lobata HOM05D005838 ORTHO05D007177 1.2e-115 419.9 210 100.0
CiPaw.01G287700 Carya illinoinensis HOM05D005838 ORTHO05D007177 7.5e-110 400.6 210 93.8
Haze_17070 Corylus avellana HOM05D005838 ORTHO05D007177 7.0e-108 394.0 205 93.7
VMungo1383G0749 Vigna mungo HOM05D005838 ORTHO05D007177 4.4e-94 348.2 210 80.5
Glyma.16G058300 Glycine max HOM05D005838 ORTHO05D007177 7.5e-94 347.4 210 81.4
arahy.Tifrunner.gnm1.ann1.5TUK4V Arachis hypogaea HOM05D005838 ORTHO05D007177 2.2e-93 345.9 210 81.0
Phvul.001G114700 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 2.4e-92 342.4 210 79.0
TPR.G2804 Trifolium pratense HOM05D005838 ORTHO05D007177 2.4e-92 342.4 210 81.0
arahy.Tifrunner.gnm1.ann1.YA5U61 Arachis hypogaea HOM05D005838 ORTHO05D007177 1.2e-91 340.1 205 81.0
Ca_24072_v3 Cicer arietinum L. HOM05D005838 ORTHO05D007177 1.2e-91 340.1 210 80.0
arahy.Tifrunner.gnm1.ann1.3RZV8E Arachis hypogaea HOM05D005838 ORTHO05D007177 2.0e-91 339.3 205 81.0
Lalb_Chr22g0360471 Lupinus albus HOM05D005838 ORTHO05D007177 5.9e-91 337.8 205 80.5
arahy.Tifrunner.gnm1.ann1.9R8UEA Arachis hypogaea HOM05D005838 ORTHO05D007177 7.8e-91 337.4 205 80.5
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 6.6e-90 334.3 205 80.0
Medtr7g029455 Medicago truncatula HOM05D005838 ORTHO05D007177 2.5e-89 332.4 216 76.9
Sed0000199 Sechium edule HOM05D005838 ORTHO05D007177 2.5e-89 332.4 210 74.3
Dinv03043 Davidia involucrata HOM05D005838 ORTHO05D007177 4.3e-89 331.6 209 77.0
Duzib114G0236 Durio zibethinus HOM05D005838 ORTHO05D007177 4.3e-89 331.6 210 77.1
Thecc.10G041400 Theobroma cacao HOM05D005838 ORTHO05D007177 5.6e-89 331.3 210 77.6
Gohir.A10G219500 Gossypium hirsutum HOM05D005838 ORTHO05D007177 1.2e-88 330.1 210 76.7
Gohir.D10G229000 Gossypium hirsutum HOM05D005838 ORTHO05D007177 1.2e-88 330.1 210 76.7
Gorai.011G261500 Gossypium raimondii HOM05D005838 ORTHO05D007177 1.2e-88 330.1 210 76.7
Lj1g0024127 Lotus japonicus HOM05D005838 ORTHO05D007177 1.2e-88 330.1 206 78.2
MELO3C024840.2 Cucumis melo HOM05D005838 ORTHO05D007177 2.8e-88 328.9 210 74.3
GSVIVG01024370001 Vitis vinifera HOM05D005838 ORTHO05D007177 3.6e-88 328.6 209 76.6
FvH4_7g22520 Fragaria vesca HOM05D005838 ORTHO05D007177 6.1e-88 327.8 211 75.8
FAN06G0860 Fragaria x ananassa HOM05D005838 ORTHO05D007177 6.1e-88 327.8 211 75.8
FAN06G0984 Fragaria x ananassa HOM05D005838 ORTHO05D007177 6.1e-88 327.8 211 75.8
Nn1g07214 Nelumbo nucifera HOM05D005838 ORTHO05D007177 8.0e-88 327.4 210 77.1
FAN10G2643 Fragaria x ananassa HOM05D005838 ORTHO05D007177 1.8e-87 326.2 211 75.4
Sc11g0007930 Simmondsia chinensis HOM05D005838 ORTHO05D007177 2.3e-87 325.9 210 75.7
RcHm_v2.0_Chr1g0367201 Rosa chinensis HOM05D005838 ORTHO05D007177 4.0e-87 325.1 211 74.9
TAR369G1142 Trochodendron aralioides HOM05D005838 ORTHO05D007177 6.8e-87 324.3 190 82.1
CsaV3_4G009680 Cucumis sativus L. HOM05D005838 ORTHO05D007177 8.9e-87 323.9 211 73.5
FAN01G2297 Fragaria x ananassa HOM05D005838 ORTHO05D007177 3.4e-86 322.0 207 75.4
COL.COLO4_15048 Corchorus olitorius HOM05D005838 ORTHO05D007177 5.8e-86 321.2 208 74.0
Lj8A84T88 Lonicera japonica HOM05D005838 ORTHO05D007177 5.8e-86 321.2 205 75.1
Dinv26018 Davidia involucrata HOM05D005838 ORTHO05D007177 7.5e-86 320.9 209 75.1
FAN01G2632 Fragaria x ananassa HOM05D005838 ORTHO05D007177 7.5e-86 320.9 207 74.9
MD01G1134500 Malus domestica HOM05D005838 ORTHO05D007177 1.3e-85 320.1 211 73.0
FAN03G0424 Fragaria x ananassa HOM05D005838 ORTHO05D007177 1.7e-85 319.7 206 75.2
CANSAT78G0186 Cannabis sativa HOM05D005838 ORTHO05D007177 2.2e-85 319.3 215 72.1
HPP92_027375 Vanilla planifolia HOM05D005838 ORTHO05D007177 4.9e-85 318.2 209 71.8
Aqoxy6G01179 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 8.3e-85 317.4 210 72.9
CDE04G0192 Ceratophyllum demersum HOM05D005838 ORTHO05D007177 8.3e-85 317.4 209 73.7
Prupe.2G235900 Prunus persica HOM05D005838 ORTHO05D007177 8.3e-85 317.4 211 72.0
CSS0040522 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 1.1e-84 317.0 210 72.9
Hund16085 Selenicereus undatus HOM05D005838 ORTHO05D007177 1.4e-84 316.6 210 72.4
Manes.07G116600 Manihot esculenta HOM05D005838 ORTHO05D007177 3.2e-84 315.5 209 74.2
Aqoxy3G02271 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 1.2e-83 313.5 210 72.4
Os01g0248600 Oryza sativa ssp. japonica HOM05D005838 ORTHO05D007177 1.6e-83 313.2 210 71.4
Atru.chr12.445 Acer truncatum HOM05D005838 ORTHO05D007177 2.0e-83 312.8 214 71.5
MD07G1199100 Malus domestica HOM05D005838 ORTHO05D007177 2.0e-83 312.8 211 71.1
Zm00001eb331580 Zea mays HOM05D005838 ORTHO05D007177 2.7e-83 312.4 210 71.9
AUR62012091 Chenopodium quinoa HOM05D005838 ORTHO05D007177 3.5e-83 312.0 205 71.2
AUR62039375 Chenopodium quinoa HOM05D005838 ORTHO05D007177 4.6e-83 311.6 205 70.7
PSO339G6019 Papaver somniferum HOM05D005838 ORTHO05D007177 7.8e-83 310.8 209 70.8
Cc02_g07820 Coffea canephora HOM05D005838 ORTHO05D007177 1.3e-82 310.1 210 71.4
TAR623G0537 Trochodendron aralioides HOM05D005838 ORTHO05D007177 1.3e-82 310.1 212 73.1
EL10Ac2g04744 Beta vulgaris HOM05D005838 ORTHO05D007177 1.7e-82 309.7 227 67.0
PSO541G0023 Papaver somniferum HOM05D005838 ORTHO05D007177 1.7e-82 309.7 209 72.2
Potri.010G203600 Populus trichocarpa HOM05D005838 ORTHO05D007177 3.3e-81 305.4 209 71.3
Sabra10G0157100 Salix brachista HOM05D005838 ORTHO05D007177 5.6e-81 304.7 209 71.3
Eucgr.J00011 Eucalyptus grandis HOM05D005838 ORTHO05D007177 7.3e-81 304.3 211 72.0
Oeu064376.1 Olea europaea HOM05D005838 ORTHO05D007177 9.5e-81 303.9 210 71.4
Lsat_1_v5_gn_1_78580 Lactuca sativa HOM05D005838 ORTHO05D007177 2.1e-80 302.8 211 72.0
Ciclev10033314m.g Citrus clementina HOM05D005838 ORTHO05D007177 3.6e-80 302.0 196 73.5
Hma1.2p1_0405F.1_g145680 Hydrangea macrophylla HOM05D005838 ORTHO05D007177 4.7e-80 301.6 210 71.4
HanXRQChr17g0562051 Helianthus annuus HOM05D005838 ORTHO05D007177 2.3e-79 299.3 210 69.5
TWI34G1817 Tripterygium wilfordii HOM05D005838 ORTHO05D007177 2.3e-79 299.3 209 70.3
MBI14_g35405_MAGBIO Magnolia biondii HOM05D005838 ORTHO05D007177 4.0e-79 298.5 209 71.3
Rhsim09G0166200 Rhododendron simsii HOM05D005838 ORTHO05D007177 4.0e-79 298.5 205 69.8
Aa31sc79G70 Aethionema arabicum HOM05D005838 ORTHO05D007177 5.2e-79 298.1 210 69.5
SGA_v2.0_scaffold2G01002 Striga asiatica HOM05D005838 ORTHO05D007177 1.2e-78 297.0 210 68.6
Sp3g10660 Schrenkiella parvula HOM05D005838 ORTHO05D007177 1.5e-78 296.6 210 68.6
vmacro10230 Vaccinium macrocarpon HOM05D005838 ORTHO05D007177 3.4e-78 295.4 205 69.8
CARHR087030 Cardamine hirsuta HOM05D005838 ORTHO05D007177 4.4e-78 295.0 210 68.6
MSTRG.287 Avicennia marina HOM05D005838 ORTHO05D007177 1.3e-77 293.5 210 68.1
AL3G24160 Arabidopsis lyrata HOM05D005838 ORTHO05D007177 1.7e-77 293.1 210 69.0
Thhalv10021517m.g Eutrema salsugineum HOM05D005838 ORTHO05D007177 1.7e-77 293.1 210 67.6
ATR0579G085 Amborella trichopoda HOM05D005838 ORTHO05D007177 2.2e-77 292.7 209 67.5
AT3G12530 Arabidopsis thaliana HOM05D005838 ORTHO05D007177 2.2e-77 292.7 210 68.6
SEGI_05999 Sequoiadendron giganteum HOM05D005838 ORTHO05D007177 2.2e-77 292.7 209 68.9
Carub.0003s1186 Capsella rubella HOM05D005838 ORTHO05D007177 8.3e-77 290.8 210 67.6
BolC3t16845H Brassica oleracea HOM05D005838 ORTHO05D007177 4.6e-75 285.0 210 66.2
BraA03t12920Z Brassica rapa HOM05D005838 ORTHO05D007177 7.8e-75 284.3 210 66.2
C03p45720 Brassica napus HOM05D005838 ORTHO05D007177 1.7e-74 283.1 205 66.3
Migut.M01657 Erythranthe guttata HOM05D005838 ORTHO05D007177 1.7e-74 283.1 210 66.2
HanXRQChr14g0458031 Helianthus annuus HOM05D005838 ORTHO05D007177 5.1e-74 281.6 194 70.1
CAN.G1013.29 Capsicum annuum HOM05D005838 ORTHO05D007177 6.6e-74 281.2 210 67.6
A03p37670 Brassica napus HOM05D005838 ORTHO05D007177 8.6e-74 280.8 205 66.3
Solyc05g054430.4 Solanum lycopersicum HOM05D005838 ORTHO05D007177 8.6e-74 280.8 210 67.1
Sopen05g032920 Solanum pennellii HOM05D005838 ORTHO05D007177 8.6e-74 280.8 210 67.1
PGSC0003DMG402023533 Solanum tuberosum HOM05D005838 ORTHO05D007177 8.6e-74 280.8 210 67.1
Duzib128G0804 Durio zibethinus HOM05D005838 ORTHO05D007177 1.9e-73 279.6 191 71.7
THA.LOC104827330 Tarenaya hassleriana HOM05D005838 ORTHO05D007177 1.2e-72 276.9 191 70.2
DCAR_011703 Daucus carota HOM05D005838 ORTHO05D007177 4.7e-72 275.0 181 73.5
BcaB04g21071 Brassica carinata HOM05D005838 ORTHO05D007177 6.2e-72 274.6 216 65.3
ECA238G0467 Erigeron canadensis HOM05D005838 ORTHO05D007177 5.2e-71 271.6 201 65.2
Nitab4.5_0008565g0020 Nicotiana tabacum HOM05D005838 ORTHO05D007177 2.2e-69 266.2 234 59.0
Peaxi162Scf00886g00023 Petunia axillaris HOM05D005838 ORTHO05D007177 1.2e-67 260.4 199 66.3
PGR044G1343 Punica granatum HOM05D005838 ORTHO05D007177 1.9e-65 253.1 205 62.9
Actinidia13881 Actinidia chinensis HOM05D005838 ORTHO05D007177 4.3e-65 251.9 156 76.3
Nitab4.5_0025932g0010 Nicotiana tabacum HOM05D005838 ORTHO05D007177 4.3e-65 251.9 210 61.9
Mapoly0001s0197 Marchantia polymorpha HOM05D005838 ORTHO05D007177 5.6e-65 251.5 205 58.5
ECA236G5038 Erigeron canadensis HOM05D005838 ORTHO05D007177 7.3e-65 251.1 186 64.5
SMO358G0240 Selaginella moellendorffii HOM05D005838 ORTHO05D007177 1.2e-62 243.8 172 65.7
Phvul.004G101800 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 3.8e-61 238.8 144 78.5
Pp3c24_19790 Physcomitrium patens HOM05D005838 ORTHO05D007177 2.4e-60 236.1 211 55.0
CBR_g83733 Chara braunii HOM05D005838 ORTHO05D007177 4.4e-54 215.3 166 57.8
Potri.008G056200 Populus trichocarpa HOM05D005838 ORTHO05D007177 5.8e-54 214.9 209 56.0
AagrBONN_evm.TU.Sc2ySwM_117.2288 Anthoceros agrestis HOM05D005838 ORTHO05D007177 6.0e-43 178.3 204 45.6
ECA240G3935 Erigeron canadensis HOM05D005838 ORTHO05D007177 5.6e-41 171.8 113 70.8
SalBow6G6757 Salvia bowleyana HOM05D005838 ORTHO05D007177 3.1e-39 166.0 133 64.7
PRCOL_00001833 Prasinoderma coloniale HOM05D005838 ORTHO05D007177 6.7e-34 148.3 182 40.1
ClCG10G009550 Citrullus lanatus HOM05D005838 ORTHO05D007177 2.1e-32 143.3 79 78.5
MCO01G144 Micromonas commoda HOM05D005838 ORTHO05D007177 1.3e-29 134.0 167 41.9
AagrBONN_evm.TU.Sc2ySwM_368.230 Anthoceros agrestis HOM05D005838 ORTHO05D007177 4.3e-25 119.0 114 44.7
Cre01.g029100 Chlamydomonas reinhardtii HOM05D005838 ORTHO05D007177 2.2e-24 116.7 177 37.9
Ah.04g162270 Amaranthus hybridus HOM05D005838 ORTHO05D007177 4.1e-23 112.5 63 74.6
BcaC09g48252 Brassica carinata HOM05D000758 ORTHO05D001216 2.0e-22 110.2 196 37.8
unitig_27.g25062 Utricularia gibba HOM05D005838 ORTHO05D007177 7.7e-22 108.2 116 50.9
Cpa.g.sc1.409 Carica papaya HOM05D005838 ORTHO05D007177 1.4e-20 104.0 88 64.8
Oeu048244.1 Olea europaea HOM05D005838 ORTHO05D007177 4.3e-17 92.4 50 82.0
CSS0016900 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 4.8e-16 89.0 71 57.7
BolC5t34206H Brassica oleracea HOM05D005838 ORTHO05D007177 2.0e-14 83.6 83 56.6
C05p55400 Brassica napus HOM05D005838 ORTHO05D007177 2.6e-14 83.2 78 56.4
C01p52640 Brassica napus HOM05D005838 ORTHO05D007177 6.5e-13 78.6 94 45.7
BNapus_Darmor_BZH_scaffold_149p00070 Brassica napus HOM05D005838 ORTHO05D041122 1.4e-12 77.4 152 36.2
BolC1t05204H Brassica oleracea HOM05D005838 ORTHO05D007177 6.1e-11 72.0 88 45.5
Psat7g263960 Pisum sativum HOM05D005838 ORTHO05D007177 2.6e-09 66.6 49 65.3
Dinv18752 Davidia involucrata HOM05D036176 ORTHO05D007177 4.1e-07 59.3 47 61.7
Actinidia29229 Actinidia chinensis HOM05D005838 ORTHO05D007177 3.5e-06 56.2 40 62.5


User provided reference genes

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