Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p059532 Quercus lobata HOM05D007779 ORTHO05D009863 8.8e-209 729.9 345 100.0
Oeu016027.1 Olea europaea HOM05D007779 ORTHO05D009863 8.7e-15 85.5 314 28.0
QL03p029097 Quercus lobata HOM05D007779 ORTHO05D009863 9.7e-14 82.0 349 26.4
Haze_04390 Corylus avellana HOM05D007779 ORTHO05D009863 1.3e-13 81.6 348 26.4
Prupe.6G347200 Prunus persica HOM05D007779 ORTHO05D009863 9.0e-12 75.5 351 24.5
CiPaw.07G070500 Carya illinoinensis HOM05D007779 ORTHO05D009863 2.0e-11 74.3 353 24.9
Cfa006387 Carpinus fangiana HOM05D007779 ORTHO05D009863 3.4e-11 73.6 354 25.7
Ca_09436_v3 Cicer arietinum L. HOM05D007779 ORTHO05D009863 3.4e-11 73.6 355 24.8
Phvul.006G104000 Phaseolus vulgaris HOM05D007779 ORTHO05D009863 4.5e-11 73.2 354 25.1
Psat0s3161g0280 Pisum sativum HOM05D007779 ORTHO05D009863 1.0e-10 72.0 344 23.5
COL.COLO4_08350 Corchorus olitorius HOM05D007779 ORTHO05D009863 1.7e-10 71.2 290 26.6
COL.COLO4_08348 Corchorus olitorius HOM05D007779 ORTHO05D009863 2.9e-10 70.5 291 27.8
Carub.0006s0291 Capsella rubella HOM05D007779 ORTHO05D009863 1.1e-09 68.6 347 25.4
CARHR209310 Cardamine hirsuta HOM05D007779 ORTHO05D009863 1.1e-09 68.6 344 24.1
Atru.chr2.884 Acer truncatum HOM05D007779 ORTHO05D009863 1.4e-09 68.2 342 25.1
RcHm_v2.0_Chr3g0450231 Rosa chinensis HOM05D007779 ORTHO05D009863 4.2e-09 66.6 354 22.9
arahy.Tifrunner.gnm1.ann1.C2UZEY Arachis hypogaea HOM05D007779 ORTHO05D009863 5.5e-09 66.2 356 23.6
arahy.Tifrunner.gnm1.ann1.DL8VF6 Arachis hypogaea HOM05D007779 ORTHO05D009863 5.5e-09 66.2 356 23.9
Lj1g0005336 Lotus japonicus HOM05D007779 ORTHO05D009863 5.5e-09 66.2 355 24.2
Medtr7g115440 Medicago truncatula HOM05D007779 ORTHO05D009863 5.5e-09 66.2 344 23.3
Cpa.g.sc162.10 Carica papaya HOM05D007779 ORTHO05D009863 7.2e-09 65.9 358 23.2
CsaV3_2G003840 Cucumis sativus L. HOM05D007779 ORTHO05D009863 2.7e-08 63.9 368 23.9
FAN05G4719 Fragaria x ananassa HOM05D007779 ORTHO05D009863 2.7e-08 63.9 345 24.3
Aqoxy2G01152 Aquilegia oxysepala HOM05D000664 ORTHO05D000491 3.6e-08 63.5 290 24.5
TPR.G6996 Trifolium pratense HOM05D007779 ORTHO05D009863 3.6e-08 63.5 346 23.4
TWI56G0837 Tripterygium wilfordii HOM05D007779 ORTHO05D009863 3.6e-08 63.5 331 22.7
Ciclev10019572m.g Citrus clementina HOM05D007779 ORTHO05D009863 1.8e-07 61.2 342 24.3
Oeu062739.1 Olea europaea HOM05D007779 ORTHO05D009863 2.3e-07 60.8 205 29.8
FvH4_6g02440 Fragaria vesca HOM05D007779 ORTHO05D009863 3.0e-07 60.5 344 23.5
Thecc.03G222100 Theobroma cacao HOM05D001729 ORTHO05D001155 3.9e-07 60.1 181 30.4
AT5G03970 Arabidopsis thaliana HOM05D007779 ORTHO05D009863 5.1e-07 59.7 344 24.4
FAN02G2389 Fragaria x ananassa HOM05D007779 ORTHO05D009863 5.1e-07 59.7 345 23.8
FAN14G0926 Fragaria x ananassa HOM05D007779 ORTHO05D009863 6.7e-07 59.3 345 22.9
FAN14G4661 Fragaria x ananassa HOM05D007779 ORTHO05D009863 6.7e-07 59.3 345 22.9
FAN05G5524 Fragaria x ananassa HOM05D007779 ORTHO05D009863 8.8e-07 58.9 345 23.8
C09p72880 Brassica napus HOM05D007779 ORTHO05D009863 1.1e-06 58.5 333 24.9
BolC9t60024H Brassica oleracea HOM05D007779 ORTHO05D009863 1.1e-06 58.5 333 24.9
THA.LOC104805831 Tarenaya hassleriana HOM05D007779 ORTHO05D009863 1.5e-06 58.2 329 24.0
A10p32150 Brassica napus HOM05D007779 ORTHO05D009863 1.9e-06 57.8 331 24.8
BraA10t45258Z Brassica rapa HOM05D007779 ORTHO05D009863 1.9e-06 57.8 331 24.8
Thhalv10013722m.g Eutrema salsugineum HOM05D007779 ORTHO05D009863 1.9e-06 57.8 338 24.9
QL11p009094 Quercus lobata HOM05D001729 ORTHO05D001155 1.9e-06 57.8 123 34.1
Sp6g38780 Schrenkiella parvula HOM05D007779 ORTHO05D009863 1.9e-06 57.8 345 24.3
Thecc.05G277100 Theobroma cacao HOM05D007779 ORTHO05D009863 1.9e-06 57.8 352 23.9
MELO3C004412.2 Cucumis melo HOM05D007779 ORTHO05D009863 4.3e-06 56.6 356 23.3
BcaC06g32099 Brassica carinata HOM05D007779 ORTHO05D009863 5.7e-06 56.2 332 24.1
MD12G1244700 Malus domestica HOM05D007779 ORTHO05D009863 5.7e-06 56.2 317 24.6
QL07p036134 Quercus lobata HOM05D001729 ORTHO05D001155 5.7e-06 56.2 302 24.2
Gorai.004G248800 Gossypium raimondii HOM05D007779 ORTHO05D009863 7.4e-06 55.8 346 23.1
QL06p006111 Quercus lobata HOM05D001729 ORTHO05D001155 7.4e-06 55.8 122 35.2
Gohir.D08G234100 Gossypium hirsutum HOM05D007779 ORTHO05D009863 9.7e-06 55.5 333 22.8
Rhsim08G0220200 Rhododendron simsii HOM05D001729 ORTHO05D001155 9.7e-06 55.5 123 35.0


User provided reference genes

Program Settings