Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p056659 Quercus lobata HOM05D005690 ORTHO05D007075 3.5e-132 474.9 237 100.0
Cfa001602 Carpinus fangiana HOM05D005690 ORTHO05D007075 1.4e-101 373.2 241 80.1
CiPaw.02G175700 Carya illinoinensis HOM05D005690 ORTHO05D007075 7.9e-100 367.5 241 78.0
Prupe.2G217200 Prunus persica HOM05D005690 ORTHO05D007075 2.2e-97 359.4 243 76.1
Haze_16926 Corylus avellana HOM05D005690 ORTHO05D007075 3.7e-97 358.6 241 78.0
GSVIVG01016316001 Vitis vinifera HOM05D005690 ORTHO05D007075 4.8e-97 358.2 243 73.7
Dinv11797 Davidia involucrata HOM05D005690 ORTHO05D007075 1.1e-96 357.1 243 75.3
Atru.chr12.697 Acer truncatum HOM05D005690 ORTHO05D007075 1.4e-96 356.7 242 76.4
TAR636G2049 Trochodendron aralioides HOM05D005690 ORTHO05D007075 1.4e-96 356.7 247 75.3
Potri.010G219400 Populus trichocarpa HOM05D005690 ORTHO05D007075 5.3e-96 354.8 244 75.4
Atru.chr12.670 Acer truncatum HOM05D005690 ORTHO05D007075 1.5e-95 353.2 241 77.2
MD01G1111700 Malus domestica HOM05D005690 ORTHO05D007075 3.4e-95 352.1 243 74.1
MD07G1177900 Malus domestica HOM05D005690 ORTHO05D007075 4.5e-95 351.7 243 73.3
Thecc.10G069500 Theobroma cacao HOM05D005690 ORTHO05D007075 4.5e-95 351.7 243 74.9
COL.COLO4_32034 Corchorus olitorius HOM05D005690 ORTHO05D007075 2.2e-94 349.4 243 76.1
MELO3C002879.2 Cucumis melo HOM05D005690 ORTHO05D007075 3.2e-93 345.5 240 74.6
FvH4_7g20020 Fragaria vesca HOM05D005690 ORTHO05D007075 3.2e-93 345.5 244 73.0
FAN03G1698 Fragaria x ananassa HOM05D005690 ORTHO05D007075 3.2e-93 345.5 244 73.0
FAN06G0212 Fragaria x ananassa HOM05D005690 ORTHO05D007075 3.2e-93 345.5 244 73.0
Potri.008G042800 Populus trichocarpa HOM05D005690 ORTHO05D007075 3.2e-93 345.5 244 73.4
Ciclev10032614m.g Citrus clementina HOM05D005690 ORTHO05D007075 5.5e-93 344.7 243 74.9
Duzib114G0556 Durio zibethinus HOM05D005690 ORTHO05D007075 5.5e-93 344.7 243 73.7
FAN10G0816 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.6e-92 343.2 244 72.5
Manes.07G103000 Manihot esculenta HOM05D005690 ORTHO05D007075 2.1e-92 342.8 243 72.8
FAN01G0973 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.0e-91 340.5 244 71.7
Gorai.010G204700 Gossypium raimondii HOM05D005690 ORTHO05D007075 1.8e-91 339.7 243 73.7
RcHm_v2.0_Chr1g0363981 Rosa chinensis HOM05D005690 ORTHO05D007075 1.8e-91 339.7 246 71.5
CsaV3_5G025890 Cucumis sativus L. HOM05D005690 ORTHO05D007075 5.1e-91 338.2 242 74.4
Gohir.D06G176800 Gossypium hirsutum HOM05D005690 ORTHO05D007075 6.7e-91 337.8 243 73.3
Sabra08G0029500 Salix brachista HOM05D005690 ORTHO05D007075 4.3e-90 335.1 249 69.1
Cpa.g.sc53.43 Carica papaya HOM05D005690 ORTHO05D007075 1.3e-89 333.6 242 74.4
TAR633G2147 Trochodendron aralioides HOM05D005690 ORTHO05D007075 3.7e-89 332.0 244 71.3
TWI38G1302 Tripterygium wilfordii HOM05D005690 ORTHO05D007075 4.8e-89 331.6 244 70.9
Gohir.A06G178200 Gossypium hirsutum HOM05D005690 ORTHO05D007075 6.3e-89 331.3 246 72.0
Peaxi162Scf00108g00166 Petunia axillaris HOM05D005690 ORTHO05D007075 6.3e-89 331.3 243 69.1
Potri.010G219000 Populus trichocarpa HOM05D005690 ORTHO05D007075 1.1e-88 330.5 218 75.2
Lj2g0014971 Lotus japonicus HOM05D005690 ORTHO05D007075 5.3e-88 328.2 253 70.4
CANSAT56G3535 Cannabis sativa HOM05D005690 ORTHO05D007075 9.1e-88 327.4 242 71.9
Eucgr.J01111 Eucalyptus grandis HOM05D005690 ORTHO05D007075 5.9e-87 324.7 244 69.3
Phvul.004G075000 Phaseolus vulgaris HOM05D005690 ORTHO05D007075 5.9e-87 324.7 243 70.8
Lalb_Chr19g0129571 Lupinus albus HOM05D005690 ORTHO05D007075 7.7e-87 324.3 246 70.7
Sabra10G0169300 Salix brachista HOM05D005690 ORTHO05D007075 7.7e-87 324.3 219 75.3
Rhsim09G0153300 Rhododendron simsii HOM05D005690 ORTHO05D007075 2.9e-86 322.4 240 69.6
Nitab4.5_0012288g0020 Nicotiana tabacum HOM05D005690 ORTHO05D007075 3.8e-86 322.0 243 67.9
Sed0019941 Sechium edule HOM05D005690 ORTHO05D007075 5.0e-86 321.6 236 71.6
Hma1.2p1_2080F.1_g313490 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 8.5e-86 320.9 253 65.6
Nitab4.5_0000476g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 1.1e-85 320.5 243 67.9
Peaxi162Scf01175g00023 Petunia axillaris HOM05D005690 ORTHO05D007075 1.9e-85 319.7 235 68.9
MSTRG.373 Avicennia marina HOM05D005690 ORTHO05D007075 3.2e-85 318.9 243 69.1
Ca_04676_v3 Cicer arietinum L. HOM05D005690 ORTHO05D007075 3.2e-85 318.9 249 69.5
VMungo0464G0948 Vigna mungo HOM05D005690 ORTHO05D007075 3.2e-85 318.9 245 69.0
Glyma.17G183500 Glycine max HOM05D005690 ORTHO05D007075 4.2e-85 318.5 243 69.5
Nn2g13015 Nelumbo nucifera HOM05D005690 ORTHO05D007075 7.2e-85 317.8 232 72.0
PSO384G2564 Papaver somniferum HOM05D005690 ORTHO05D007075 7.2e-85 317.8 241 68.9
Cc02_g11390 Coffea canephora HOM05D005690 ORTHO05D007075 2.1e-84 316.2 243 70.4
PSO339G2382 Papaver somniferum HOM05D005690 ORTHO05D007075 2.7e-84 315.8 241 68.0
Sed0011214 Sechium edule HOM05D005690 ORTHO05D007075 2.7e-84 315.8 240 70.4
THA.LOC104802837 Tarenaya hassleriana HOM05D005690 ORTHO05D007075 2.7e-84 315.8 244 67.2
Sopen05g034500 Solanum pennellii HOM05D005690 ORTHO05D007075 1.0e-83 313.9 243 66.3
CAN.G694.84 Capsicum annuum HOM05D005690 ORTHO05D007075 1.4e-83 313.5 243 65.8
Hma1.2p1_0453F.1_g156020 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 3.0e-83 312.4 217 70.5
Solyc05g056090.3 Solanum lycopersicum HOM05D005690 ORTHO05D007075 3.0e-83 312.4 243 65.8
PGR044G2452 Punica granatum HOM05D005690 ORTHO05D007075 6.7e-83 311.2 248 67.7
PGSC0003DMG400023460 Solanum tuberosum HOM05D005690 ORTHO05D007075 1.1e-82 310.5 243 65.0
Hund19342 Selenicereus undatus HOM05D005690 ORTHO05D007075 1.5e-82 310.1 243 65.8
Aa31LG9G7550 Aethionema arabicum HOM05D005690 ORTHO05D007075 2.6e-82 309.3 242 64.5
AUR62020766 Chenopodium quinoa HOM05D005690 ORTHO05D007075 3.3e-82 308.9 243 66.7
AUR62027946 Chenopodium quinoa HOM05D005690 ORTHO05D007075 4.4e-82 308.5 243 67.1
Migut.F01989 Erythranthe guttata HOM05D005690 ORTHO05D007075 9.7e-82 307.4 243 65.8
ECA232G2854 Erigeron canadensis HOM05D005690 ORTHO05D007075 1.3e-81 307.0 246 65.9
Nitab4.5_0000233g0230 Nicotiana tabacum HOM05D005690 ORTHO05D007075 4.8e-81 305.1 212 70.3
vmacro04884 Vaccinium macrocarpon HOM05D005690 ORTHO05D007075 2.4e-80 302.8 242 65.7
MBI05_g11579_MAGBIO Magnolia biondii HOM05D005690 ORTHO05D007075 4.1e-80 302.0 192 79.7
Nitab4.5_0009003g0010 Nicotiana tabacum HOM05D005690 ORTHO05D007075 7.0e-80 301.2 218 69.3
CARHR130040 Cardamine hirsuta HOM05D005690 ORTHO05D007075 1.2e-79 300.4 240 63.3
TPR.G36634 Trifolium pratense HOM05D005690 ORTHO05D007075 1.2e-79 300.4 252 65.5
AT2G35790 Arabidopsis thaliana HOM05D005690 ORTHO05D007075 1.5e-79 300.1 243 64.2
BolC4t27955H Brassica oleracea HOM05D005690 ORTHO05D007075 1.5e-79 300.1 242 64.9
BraA04t18224Z Brassica rapa HOM05D005690 ORTHO05D007075 3.5e-79 298.9 248 62.5
Carub.0004s1755 Capsella rubella HOM05D005690 ORTHO05D007075 3.5e-79 298.9 243 64.2
Lsat_1_v5_gn_9_67140 Lactuca sativa HOM05D005690 ORTHO05D007075 3.5e-79 298.9 246 63.4
HanXRQChr09g0246501 Helianthus annuus HOM05D005690 ORTHO05D007075 4.5e-79 298.5 246 63.4
arahy.Tifrunner.gnm1.ann1.08HL34 Arachis hypogaea HOM05D005690 ORTHO05D007075 7.7e-79 297.7 244 64.8
arahy.Tifrunner.gnm1.ann1.8E9GH8 Arachis hypogaea HOM05D005690 ORTHO05D007075 1.0e-78 297.4 244 64.3
Aqoxy6G02013 Aquilegia oxysepala HOM05D005690 ORTHO05D007075 1.3e-78 297.0 243 63.8
Rhsim03G0123000 Rhododendron simsii HOM05D005690 ORTHO05D007075 1.3e-78 297.0 216 69.0
AL4G31900 Arabidopsis lyrata HOM05D005690 ORTHO05D007075 2.5e-77 292.7 246 62.2
A04p27260 Brassica napus HOM05D005690 ORTHO05D007075 2.5e-77 292.7 250 62.4
EL10Ac2g03578 Beta vulgaris HOM05D005690 ORTHO05D007075 3.2e-77 292.4 223 68.2
C04p64770 Brassica napus HOM05D005690 ORTHO05D007075 5.5e-77 291.6 246 63.0
Thhalv10017166m.g Eutrema salsugineum HOM05D005690 ORTHO05D007075 7.2e-77 291.2 245 63.7
ClCG09G020510 Citrullus lanatus HOM05D005690 ORTHO05D007075 9.4e-77 290.8 217 72.8
Sp4g18050 Schrenkiella parvula HOM05D005690 ORTHO05D007075 2.7e-76 289.3 243 63.8
unitig_0.g529 Utricularia gibba HOM05D005690 ORTHO05D007075 2.7e-76 289.3 206 68.4
Medtr6g033405 Medicago truncatula HOM05D005690 ORTHO05D007075 3.6e-76 288.9 193 75.1
BcaB06g28872 Brassica carinata HOM05D005690 ORTHO05D007075 4.7e-76 288.5 246 61.8
SGA_v2.0_scaffold28G12052 Striga asiatica HOM05D005690 ORTHO05D007075 6.1e-76 288.1 241 65.1
ATR1159G074 Amborella trichopoda HOM05D005690 ORTHO05D007075 8.0e-76 287.7 223 66.8
BcaC01g05707 Brassica carinata HOM05D005690 ORTHO05D007075 1.0e-75 287.3 243 63.0
C03p22980 Brassica napus HOM05D005690 ORTHO05D007075 1.0e-75 287.3 243 63.0
A03p19730 Brassica napus HOM05D005690 ORTHO05D007075 1.8e-75 286.6 247 61.1
Ah.16g108410 Amaranthus hybridus HOM05D005690 ORTHO05D007075 5.2e-75 285.0 227 63.4
SalBow4G1295 Salvia bowleyana HOM05D005690 ORTHO05D007075 3.3e-74 282.3 233 61.8
HanXRQChr17g0563371 Helianthus annuus HOM05D005690 ORTHO05D007075 5.7e-74 281.6 188 72.9
SalBow3G1299 Salvia bowleyana HOM05D005690 ORTHO05D007075 1.3e-73 280.4 243 60.9
Eucgr.J01110 Eucalyptus grandis HOM05D005690 ORTHO05D007075 4.8e-73 278.5 231 59.7
HPP92_003607 Vanilla planifolia HOM05D005690 ORTHO05D007075 2.4e-72 276.2 195 70.3
CDE04G0636 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 7.0e-72 274.6 190 70.5
BcaB01g03881 Brassica carinata HOM05D005690 ORTHO05D007075 5.9e-71 271.6 247 58.7
Zm00001eb064810 Zea mays HOM05D005690 ORTHO05D007075 1.0e-70 270.8 210 67.6
BcaC02g07668 Brassica carinata HOM05D005690 ORTHO05D007075 3.6e-68 262.3 222 61.7
Os03g0853800 Oryza sativa ssp. japonica HOM05D005690 ORTHO05D007075 4.4e-66 255.4 208 65.4
SEGI_15078 Sequoiadendron giganteum HOM05D005690 ORTHO05D007075 5.7e-66 255.0 170 69.4
CDE07G1130 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 9.7e-66 254.2 186 68.8
CSS0000246 Camellia sinensis var. sinensis HOM05D005690 ORTHO05D007075 1.3e-65 253.8 204 66.7
CiPaw.01G275500 Carya illinoinensis HOM05D005690 ORTHO05D007075 1.6e-55 220.3 203 61.6
Peaxi162Scf00108g00173 Petunia axillaris HOM05D005690 ORTHO05D007075 1.6e-52 210.3 121 81.0
Sc06g0001780 Simmondsia chinensis HOM05D005690 ORTHO05D007075 1.4e-51 207.2 119 80.7
Lj8C97T4 Lonicera japonica HOM05D005690 ORTHO05D007075 7.5e-50 201.4 120 77.5
Nitab4.5_0003072g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 2.4e-48 196.4 179 57.5
Mapoly0033s0041 Marchantia polymorpha HOM05D005690 ORTHO05D007075 4.3e-45 185.7 184 47.8
AagrBONN_evm.TU.Sc2ySwM_362.1612 Anthoceros agrestis HOM05D005690 ORTHO05D007075 1.2e-44 184.1 143 57.3
Psat1g099440 Pisum sativum HOM05D005690 ORTHO05D007075 8.0e-44 181.4 164 59.1
BcaB01g03882 Brassica carinata HOM05D005690 ORTHO05D007075 1.0e-43 181.0 110 73.6
Pp3c10_15170 Physcomitrium patens HOM05D005690 ORTHO05D007075 4.0e-43 179.1 171 49.1
Mapoly0033s0042 Marchantia polymorpha HOM05D005690 ORTHO05D007075 1.6e-39 167.2 224 41.5
Psat2g052960 Pisum sativum HOM05D004553 ORTHO05D005426 9.8e-34 147.9 196 44.4
SMO239G0063 Selaginella moellendorffii HOM05D005690 ORTHO05D007075 3.3e-29 132.9 172 37.2
Lalb_Chr01g0010161 Lupinus albus HOM05D005690 ORTHO05D007075 8.9e-27 124.8 67 86.6
Lalb_Chr01g0010151 Lupinus albus HOM05D005690 ORTHO05D007075 9.9e-18 94.7 128 50.0
Nn2g10688 Nelumbo nucifera HOM05D005690 ORTHO05D007075 4.2e-16 89.4 103 52.4
Cre12.g540051 Chlamydomonas reinhardtii HOM05D005690 ORTHO05D007075 9.3e-16 88.2 153 32.0
MCO03G451 Micromonas commoda HOM05D005690 ORTHO05D007075 1.7e-14 84.0 183 32.2
CDE07G0610 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 5.1e-14 82.4 121 42.1


User provided reference genes

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