Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p054789 Quercus lobata HOM05D009695 ORTHO05D007271 7.7e-49 196.8 99 100.0
CiPaw.01G269700 Carya illinoinensis HOM05D007861 ORTHO05D007271 1.1e-23 113.2 101 64.4
Cfa001682 Carpinus fangiana HOM05D009695 ORTHO05D007271 9.5e-23 110.2 104 60.6
Haze_16853 Corylus avellana HOM05D009695 ORTHO05D007271 1.6e-22 109.4 94 60.6
CiPaw.02G172600 Carya illinoinensis HOM05D019773 ORTHO05D007271 1.6e-17 92.8 95 60.0
Potri.008G036000 Populus trichocarpa HOM05D007861 ORTHO05D007271 2.7e-17 92.0 98 53.1
CSS0012629 Camellia sinensis var. sinensis HOM05D007861 ORTHO05D007271 7.8e-17 90.5 101 51.5
Nn2g13767 Nelumbo nucifera HOM05D007861 ORTHO05D007271 2.5e-15 85.5 106 50.0
TAR633G0087 Trochodendron aralioides HOM05D007861 ORTHO05D007271 9.5e-15 83.6 95 52.6
Manes.07G095300 Manihot esculenta HOM05D009695 ORTHO05D007271 2.1e-14 82.4 91 48.4
Potri.010G226200 Populus trichocarpa HOM05D007861 ORTHO05D007271 2.1e-14 82.4 101 47.5
Gohir.D05G294900 Gossypium hirsutum HOM05D009695 ORTHO05D007271 6.8e-13 77.4 103 47.6
Gorai.009G311600 Gossypium raimondii HOM05D009695 ORTHO05D007271 3.4e-12 75.1 103 46.6
Thecc.10G081700 Theobroma cacao HOM05D009695 ORTHO05D007271 4.4e-12 74.7 81 48.1
Gohir.A05G294400 Gossypium hirsutum HOM05D009695 ORTHO05D007271 5.8e-12 74.3 103 46.6
Sabra10G0174600 Salix brachista HOM05D007861 ORTHO05D007271 9.9e-12 73.6 102 44.1
Phvul.007G098200 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 1.7e-11 72.8 97 48.5
Prupe.2G209700 Prunus persica HOM05D019773 ORTHO05D007271 1.7e-11 72.8 96 49.0
Nn2g11569 Nelumbo nucifera HOM05D007861 ORTHO05D007271 2.2e-11 72.4 94 48.9
Cfa010349 Carpinus fangiana HOM05D007861 ORTHO05D007271 1.9e-10 69.3 81 49.4
Thhalv10011102m.g Eutrema salsugineum HOM05D009695 ORTHO05D007271 3.2e-10 68.6 75 46.7
TPR.G10289 Trifolium pratense HOM05D007861 ORTHO05D007271 1.2e-09 66.6 94 45.7
Manes.10G049800 Manihot esculenta HOM05D009695 ORTHO05D007271 2.7e-09 65.5 98 43.9
Rhsim03G0116500 Rhododendron simsii HOM05D009695 ORTHO05D007271 2.7e-09 65.5 103 39.8
BcaB01g00155 Brassica carinata HOM05D009695 ORTHO05D007271 3.5e-09 65.1 86 40.7
Ciclev10033954m.g Citrus clementina HOM05D007861 ORTHO05D007271 3.5e-09 65.1 96 43.8
COL.COLO4_10198 Corchorus olitorius HOM05D009695 ORTHO05D007271 6.0e-09 64.3 101 39.6
Haze_23757 Corylus avellana HOM05D007861 ORTHO05D007271 6.0e-09 64.3 105 42.9
Medtr1g094250 Medicago truncatula HOM05D007861 ORTHO05D007271 6.0e-09 64.3 89 46.1
DCAR_019088 Daucus carota HOM05D009695 ORTHO05D007271 1.3e-08 63.2 96 42.7
MBI18_g25264_MAGBIO Magnolia biondii HOM05D022601 ORTHO05D023448 1.3e-08 63.2 98 44.9
PGSC0003DMG400019683 Solanum tuberosum HOM05D007861 ORTHO05D007271 1.3e-08 63.2 44 63.6
Eucgr.G02861 Eucalyptus grandis HOM05D007861 ORTHO05D007271 2.3e-08 62.4 90 44.4
CARHR164810 Cardamine hirsuta HOM05D009695 ORTHO05D007271 3.9e-08 61.6 96 37.5
Atru.chr12.833 Acer truncatum HOM05D009695 ORTHO05D007271 5.1e-08 61.2 57 52.6
Solyc11g069730.1 Solanum lycopersicum HOM05D007861 ORTHO05D007271 5.1e-08 61.2 44 61.4
BcaC07g39776 Brassica carinata HOM05D009695 ORTHO05D007271 6.6e-08 60.8 86 38.4
C08p30020 Brassica napus HOM05D009695 ORTHO05D007271 6.6e-08 60.8 86 38.4
BolC8t50611H Brassica oleracea HOM05D009695 ORTHO05D007271 6.6e-08 60.8 86 38.4
CiPaw.14G086500 Carya illinoinensis HOM05D007861 ORTHO05D007271 8.6e-08 60.5 100 44.0
A09p47770 Brassica napus HOM05D009695 ORTHO05D007271 1.1e-07 60.1 86 38.4
Carub.0005s2144 Capsella rubella HOM05D009695 ORTHO05D007271 1.1e-07 60.1 79 40.5
Aqoxy1G01166 Aquilegia oxysepala HOM05D007861 ORTHO05D007271 1.5e-07 59.7 87 39.1
Migut.D02257 Erythranthe guttata HOM05D007861 ORTHO05D007271 1.9e-07 59.3 39 64.1
Glyma.20G182100 Glycine max HOM05D007861 ORTHO05D007271 1.9e-07 59.3 90 47.8
Lj3g0027314 Lotus japonicus HOM05D007861 ORTHO05D007271 1.9e-07 59.3 90 42.2
RcHm_v2.0_Chr1g0362761 Rosa chinensis HOM05D019773 ORTHO05D007271 1.9e-07 59.3 109 40.4
Psat6g181720 Pisum sativum HOM05D007861 ORTHO05D007271 2.5e-07 58.9 71 46.5
FAN06G4130 Fragaria x ananassa HOM05D019773 ORTHO05D007271 7.3e-07 57.4 110 39.1
Gohir.D05G106401 Gossypium hirsutum HOM05D007861 ORTHO05D007271 7.3e-07 57.4 51 54.9
Gorai.009G110500 Gossypium raimondii HOM05D007861 ORTHO05D007271 7.3e-07 57.4 51 54.9
Cpa.g.sc53.122 Carica papaya HOM05D009695 ORTHO05D007271 9.5e-07 57.0 86 41.9
Gohir.A05G106400 Gossypium hirsutum HOM05D007861 ORTHO05D007271 9.5e-07 57.0 51 52.9
Lalb_Chr02g0152111 Lupinus albus HOM05D007861 ORTHO05D007271 9.5e-07 57.0 61 49.2
Gorai.004G230800 Gossypium raimondii HOM05D007861 ORTHO05D007271 1.2e-06 56.6 93 37.6
AL5G35930 Arabidopsis lyrata HOM05D009695 ORTHO05D007271 1.6e-06 56.2 96 38.5
MSTRG.21100 Avicennia marina HOM05D007861 ORTHO05D007271 1.6e-06 56.2 91 42.9
CiPaw.13G118000 Carya illinoinensis HOM05D007861 ORTHO05D007271 1.6e-06 56.2 101 38.6
Cc02_g11000 Coffea canephora HOM05D009695 ORTHO05D007271 1.6e-06 56.2 92 38.0
Migut.N02575 Erythranthe guttata HOM05D007861 ORTHO05D007271 1.6e-06 56.2 34 70.6
Glyma.10G208600 Glycine max HOM05D007861 ORTHO05D007271 1.6e-06 56.2 94 44.7
VMungo1127G1395 Vigna mungo HOM05D007861 ORTHO05D007271 1.6e-06 56.2 90 43.3
CARHR120770 Cardamine hirsuta HOM05D014739 ORTHO05D007271 4.7e-06 54.7 43 58.1
Lsat_1_v5_gn_8_20640 Lactuca sativa HOM05D007861 ORTHO05D007271 8.1e-06 53.9 96 41.7


User provided reference genes

Program Settings