Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 3.8e-117 424.9 214 100.0
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 2.3e-90 335.9 214 80.4
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 2.6e-78 295.8 216 73.6
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 3.4e-78 295.4 182 82.4
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 5.5e-76 288.1 217 73.3
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 9.4e-76 287.3 214 72.9
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 1.4e-74 283.5 218 69.7
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 2.6e-73 279.3 190 75.8
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 3.1e-71 272.3 213 69.5
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 9.1e-71 270.8 209 68.4
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 1.2e-70 270.4 216 68.5
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 1.3e-69 266.9 213 67.6
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 1.7e-69 266.5 184 73.9
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 1.5e-68 263.5 209 67.0
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 7.2e-68 261.2 174 75.3
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 8.0e-67 257.7 207 65.7
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 1.4e-66 256.9 163 78.5
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 1.4e-66 256.9 217 65.0
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 3.0e-66 255.8 177 74.0
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 3.0e-66 255.8 177 74.0
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 3.0e-66 255.8 192 68.8
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 4.0e-66 255.4 193 68.4
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 4.0e-66 255.4 213 64.3
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 4.0e-66 255.4 174 74.1
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 5.2e-66 255.0 193 67.9
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 5.2e-66 255.0 217 64.5
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 6.7e-66 254.6 208 65.9
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 8.8e-66 254.2 210 64.8
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 8.8e-66 254.2 210 64.8
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 8.8e-66 254.2 217 64.5
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 8.8e-66 254.2 180 70.0
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 1.5e-65 253.4 210 64.3
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.0e-65 253.1 210 64.3
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 2.0e-65 253.1 174 73.0
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 3.3e-65 252.3 181 70.7
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 7.5e-65 251.1 181 70.2
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 9.7e-65 250.8 146 82.2
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 1.3e-64 250.4 213 65.3
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.7e-64 250.0 146 82.2
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 2.2e-64 249.6 214 62.1
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 2.8e-64 249.2 215 62.3
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 3.7e-64 248.8 202 64.4
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 3.7e-64 248.8 213 62.9
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 1.4e-63 246.9 152 80.9
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 1.8e-63 246.5 180 68.3
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 1.8e-63 246.5 181 69.6
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.4e-63 246.1 210 63.3
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 1.2e-62 243.8 211 61.1
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 2.7e-62 242.7 187 66.3
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 4.5e-62 241.9 150 77.3
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 5.9e-62 241.5 211 63.0
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 7.7e-62 241.1 214 59.8
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 7.7e-62 241.1 191 65.4
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 1.7e-61 240.0 219 61.6
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 5.0e-61 238.4 211 61.1
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 5.0e-61 238.4 181 64.1
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 5.0e-61 238.4 143 80.4
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 6.5e-61 238.0 190 65.3
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 6.5e-61 238.0 175 68.0
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 1.9e-60 236.5 185 65.4
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 5.5e-60 235.0 191 64.9
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 7.2e-60 234.6 152 73.7
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 7.2e-60 234.6 179 66.5
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 7.2e-60 234.6 209 60.8
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 9.4e-60 234.2 195 64.1
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 2.7e-59 232.6 153 71.9
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 3.6e-59 232.3 193 63.7
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 4.7e-59 231.9 179 64.8
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 8.0e-59 231.1 168 67.3
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 8.0e-59 231.1 154 72.7
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 1.8e-58 229.9 206 59.2
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 5.2e-58 228.4 214 56.5
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 5.2e-58 228.4 187 62.6
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 6.8e-58 228.0 174 66.7
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 1.2e-57 227.3 156 73.1
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 1.2e-57 227.3 198 60.1
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 2.0e-57 226.5 152 71.7
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 2.6e-57 226.1 198 61.1
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 1.4e-55 220.3 240 53.3
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 1.4e-55 220.3 206 60.2
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 1.8e-55 219.9 147 71.4
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 2.0e-54 216.5 173 65.9
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 2.0e-54 216.5 180 64.4
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 1.3e-53 213.8 152 73.0
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 5.0e-53 211.8 148 70.9
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 2.5e-52 209.5 131 76.3
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 1.8e-50 203.4 211 55.9
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 8.3e-48 194.5 146 67.1
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 4.5e-46 188.7 142 69.7
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 2.8e-43 179.5 147 63.3
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 1.4e-42 177.2 182 50.0
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 1.4e-42 177.2 182 50.0
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 4.4e-41 172.2 125 67.2
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 7.5e-41 171.4 156 51.9
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 7.3e-36 154.8 89 85.4
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 9.8e-33 144.4 150 55.3
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 3.7e-32 142.5 149 46.3
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 4.6e-30 135.6 154 42.9
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 2.0e-25 120.2 113 54.9
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 5.4e-23 112.1 181 35.4
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 4.3e-20 102.4 66 75.8
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 5.6e-20 102.1 118 51.7
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.8e-19 99.8 178 41.0
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.8e-19 99.8 182 38.5
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 2.6e-17 93.2 143 32.9
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 2.7e-14 83.2 154 32.5
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 1.2e-11 74.3 122 31.1
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 3.6e-11 72.8 50 74.0
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 8.9e-10 68.2 44 75.0
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 2.0e-09 67.0 46 71.7
vmacro04837 Vaccinium macrocarpon HOM05D000026 ORTHO05D000094 5.8e-09 65.5 43 74.4
VMungo1080G0524 Vigna mungo HOM05D007188 ORTHO05D008722 5.4e-07 58.9 32 84.4
MCO13G501 Micromonas commoda HOM05D058099 ORTHO05D044315 7.1e-07 58.5 124 28.2
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 7.1e-07 58.5 49 49.0
Lalb_Chr21g0313491 Lupinus albus HOM05D007188 ORTHO05D009102 4.6e-06 55.8 28 82.1


User provided reference genes

Program Settings