Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p052384 Quercus lobata HOM05D013964 ORTHO05D022273 2.2e-102 375.6 179 100.0
QL08p052426 Quercus lobata HOM05D000236 ORTHO05D022273 4.0e-56 221.9 185 67.6
QL08p052292 Quercus lobata HOM05D000236 ORTHO05D000192 1.5e-31 140.2 72 95.8
QL08p052346 Quercus lobata HOM05D000236 ORTHO05D022273 3.9e-27 125.6 72 87.5
Haze_16821 Corylus avellana HOM05D000236 ORTHO05D000192 7.2e-21 104.8 73 74.0
Cfa001714 Carpinus fangiana HOM05D000236 ORTHO05D000192 1.6e-20 103.6 73 74.0
Cfa001718 Carpinus fangiana HOM05D000236 ORTHO05D022273 8.0e-20 101.3 73 72.6
CiPaw.02G167200 Carya illinoinensis HOM05D000236 ORTHO05D000192 2.8e-17 92.8 98 57.1
QL08p052338 Quercus lobata HOM05D013964 ORTHO05D011886 1.1e-16 90.9 48 91.7
CiPaw.01G261600 Carya illinoinensis HOM05D000236 ORTHO05D000192 1.8e-16 90.1 78 66.7
TAR374G1224 Trochodendron aralioides HOM05D000236 ORTHO05D000192 6.1e-12 75.1 98 52.0
Thecc.01G375700 Theobroma cacao HOM05D000236 ORTHO05D000192 1.4e-11 73.9 72 52.8
CANSAT56G2216 Cannabis sativa HOM05D000236 ORTHO05D000192 1.8e-11 73.6 98 45.9
Nn1g01217 Nelumbo nucifera HOM05D000236 ORTHO05D000192 3.0e-11 72.8 72 59.7
Ciclev10021116m.g Citrus clementina HOM05D000236 ORTHO05D000192 4.0e-11 72.4 77 58.4
Nn4g26414 Nelumbo nucifera HOM05D000236 ORTHO05D000192 5.2e-11 72.0 97 48.5
Dinv37751 Davidia involucrata HOM05D000236 ORTHO05D000192 8.8e-11 71.2 70 57.1
TAR104G0003 Trochodendron aralioides HOM05D000236 ORTHO05D000192 1.2e-10 70.9 70 60.0
TAR375G1054 Trochodendron aralioides HOM05D000236 ORTHO05D000192 7.5e-10 68.2 70 58.6
Dinv39066 Davidia involucrata HOM05D000236 ORTHO05D000192 9.8e-10 67.8 70 55.7
Duzib138G0464 Durio zibethinus HOM05D000236 ORTHO05D000192 3.7e-09 65.9 71 47.9
Gohir.D08G155300 Gossypium hirsutum HOM05D000236 ORTHO05D000192 4.9e-09 65.5 73 46.6
Gorai.004G161300 Gossypium raimondii HOM05D000236 ORTHO05D000192 4.9e-09 65.5 73 46.6
MBI12_g10750_MAGBIO Magnolia biondii HOM05D000236 ORTHO05D000192 4.9e-09 65.5 71 54.9
Cpa.g.sc349.2 Carica papaya HOM05D000236 ORTHO05D000192 6.3e-09 65.1 73 46.6
ClCG05G002200 Citrullus lanatus HOM05D000236 ORTHO05D000192 6.3e-09 65.1 101 40.6
MBI04_g45972_MAGBIO Magnolia biondii HOM05D000236 ORTHO05D000192 6.3e-09 65.1 73 50.7
PSO478G0661 Papaver somniferum HOM05D000236 ORTHO05D000192 6.3e-09 65.1 70 57.1
COL.COLO4_12552 Corchorus olitorius HOM05D000236 ORTHO05D000192 8.3e-09 64.7 77 49.4
Psat3g115640 Pisum sativum HOM05D000236 ORTHO05D000192 1.4e-08 63.9 74 51.4
Duzib133G1460 Durio zibethinus HOM05D000236 ORTHO05D000192 1.8e-08 63.5 72 48.6
Actinidia02076 Actinidia chinensis HOM05D000236 ORTHO05D000192 3.1e-08 62.8 72 55.6
CSS0016287 Camellia sinensis var. sinensis HOM05D000236 ORTHO05D000192 5.4e-08 62.0 76 51.3
Duzib268G0287 Durio zibethinus HOM05D000236 ORTHO05D000192 5.4e-08 62.0 67 47.8
MBI04_g45971_MAGBIO Magnolia biondii HOM05D000236 ORTHO05D022273 5.4e-08 62.0 73 49.3
Glyma.18G220900 Glycine max HOM05D000236 ORTHO05D000192 9.1e-08 61.2 75 49.3
Aqoxy7G00615 Aquilegia oxysepala HOM05D000236 ORTHO05D000192 1.2e-07 60.8 76 46.1
Actinidia14475 Actinidia chinensis HOM05D000236 ORTHO05D000192 2.0e-07 60.1 72 52.8
Gohir.D11G085500 Gossypium hirsutum HOM05D000236 ORTHO05D000192 2.0e-07 60.1 79 45.6
Lj1g0017033 Lotus japonicus HOM05D000236 ORTHO05D000192 2.0e-07 60.1 77 49.4
CSS0040906 Camellia sinensis var. sinensis HOM05D000236 ORTHO05D000192 2.7e-07 59.7 77 51.9
CSS0041786 Camellia sinensis var. sinensis HOM05D000236 ORTHO05D000192 2.7e-07 59.7 77 51.9
PSO782G0968 Papaver somniferum HOM05D000236 ORTHO05D000192 2.7e-07 59.7 70 55.7
Lalb_Chr13g0291721 Lupinus albus HOM05D000236 ORTHO05D000192 4.5e-07 58.9 73 46.6
Phvul.008G076100 Phaseolus vulgaris HOM05D000236 ORTHO05D000192 4.5e-07 58.9 73 50.7
GSVIVG01027617001 Vitis vinifera HOM05D000236 ORTHO05D000192 4.5e-07 58.9 75 42.7
Gorai.007G091400 Gossypium raimondii HOM05D000236 ORTHO05D000192 5.9e-07 58.5 79 44.3
Manes.01G265500 Manihot esculenta HOM05D000236 ORTHO05D000192 5.9e-07 58.5 58 53.4
Lalb_Chr07g0189761 Lupinus albus HOM05D000236 ORTHO05D000192 1.0e-06 57.8 72 44.4
Sed0023301 Sechium edule HOM05D000236 ORTHO05D000192 1.0e-06 57.8 101 35.6
Potri.002G148600 Populus trichocarpa HOM05D000236 ORTHO05D000192 1.3e-06 57.4 72 50.0
Gohir.A11G081000 Gossypium hirsutum HOM05D000236 ORTHO05D000192 2.3e-06 56.6 79 44.3
VMungo1383G3723 Vigna mungo HOM05D000236 ORTHO05D000192 2.3e-06 56.6 76 46.1
Manes.05G044900 Manihot esculenta HOM05D000236 ORTHO05D000192 2.9e-06 56.2 62 50.0
Medtr7g074935 Medicago truncatula HOM05D000236 ORTHO05D000192 2.9e-06 56.2 73 45.2
Lj3g0023128 Lotus japonicus HOM05D000236 ORTHO05D000192 3.8e-06 55.8 78 43.6
Glyma.09G268900 Glycine max HOM05D000236 ORTHO05D000192 5.0e-06 55.5 75 46.7
Sabra02G0115800 Salix brachista HOM05D000236 ORTHO05D000192 6.6e-06 55.1 73 49.3
AUR62013631 Chenopodium quinoa HOM05D000236 ORTHO05D000192 8.6e-06 54.7 81 48.1


User provided reference genes

Program Settings