Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 1.5e-98 362.8 186 100.0
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 1.4e-62 243.4 122 95.9
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 3.0e-62 242.3 122 95.1
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 1.2e-55 220.3 124 83.9
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 1.0e-54 217.2 116 84.5
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 1.0e-54 217.2 118 85.6
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 3.0e-54 215.7 122 82.8
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 6.7e-54 214.5 120 83.3
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 8.8e-54 214.2 120 83.3
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 1.1e-53 213.8 118 83.1
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 1.1e-53 213.8 121 82.6
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 1.5e-53 213.4 116 86.2
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 1.5e-53 213.4 117 82.9
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 2.0e-53 213.0 119 83.2
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 2.6e-53 212.6 120 83.3
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 3.3e-53 212.2 117 82.1
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 3.3e-53 212.2 114 86.0
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 3.3e-53 212.2 119 82.4
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 5.7e-53 211.5 120 82.5
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 5.7e-53 211.5 117 83.8
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 1.3e-52 210.3 115 82.6
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 2.2e-52 209.5 115 82.6
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 2.8e-52 209.1 111 88.3
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 3.7e-52 208.8 116 81.9
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 3.7e-52 208.8 117 80.3
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 3.7e-52 208.8 112 86.6
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 4.8e-52 208.4 116 81.9
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 4.8e-52 208.4 122 79.5
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 6.3e-52 208.0 112 84.8
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 1.8e-51 206.5 121 79.3
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 1.8e-51 206.5 119 79.8
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 2.4e-51 206.1 113 81.4
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 3.1e-51 205.7 114 83.3
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 4.1e-51 205.3 112 84.8
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 4.1e-51 205.3 123 78.9
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 5.3e-51 204.9 117 79.5
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 5.3e-51 204.9 115 82.6
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 9.1e-51 204.1 113 83.2
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 1.2e-50 203.8 118 78.0
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 1.2e-50 203.8 113 82.3
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 1.5e-50 203.4 111 83.8
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 1.5e-50 203.4 122 77.9
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 2.0e-50 203.0 113 83.2
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 2.0e-50 203.0 156 65.4
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 2.6e-50 202.6 112 83.0
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 3.5e-50 202.2 112 81.2
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 5.9e-50 201.4 112 83.9
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 5.9e-50 201.4 112 83.0
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 7.7e-50 201.1 122 77.0
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 1.0e-49 200.7 115 80.0
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 1.7e-49 199.9 110 81.8
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.8e-49 198.7 122 77.0
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.8e-49 198.7 122 77.0
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.8e-49 198.7 122 77.0
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 5.0e-49 198.4 111 80.2
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 8.5e-49 197.6 111 82.0
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 1.1e-48 197.2 117 76.9
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 1.9e-48 196.4 111 80.2
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 1.9e-48 196.4 111 80.2
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 2.5e-48 196.1 115 75.7
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 2.5e-48 196.1 111 77.5
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 3.2e-48 195.7 111 80.2
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 4.2e-48 195.3 122 77.0
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 4.2e-48 195.3 111 79.3
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 5.5e-48 194.9 133 71.4
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 5.5e-48 194.9 110 81.8
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 7.2e-48 194.5 124 72.6
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 1.2e-47 193.7 110 79.1
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 2.7e-47 192.6 111 77.5
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.0e-46 190.7 122 75.4
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 1.0e-46 190.7 111 77.5
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 1.8e-46 189.9 127 71.7
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 1.8e-46 189.9 119 76.5
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 3.0e-46 189.1 115 75.7
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 3.9e-46 188.7 114 75.4
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 3.9e-46 188.7 119 73.9
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 6.7e-46 188.0 113 76.1
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 6.7e-46 188.0 119 74.8
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 8.8e-46 187.6 114 75.4
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 1.1e-45 187.2 116 76.7
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 1.1e-45 187.2 121 71.1
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 1.5e-45 186.8 119 74.8
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 2.0e-45 186.4 121 70.2
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 3.3e-45 185.7 111 73.9
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 4.4e-45 185.3 117 72.6
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 5.7e-45 184.9 108 79.6
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 7.4e-45 184.5 119 73.1
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 4.8e-44 181.8 114 71.9
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 6.3e-44 181.4 121 69.4
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 1.8e-43 179.9 114 75.4
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 3.1e-43 179.1 117 71.8
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 1.2e-42 177.2 111 75.7
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 4.5e-42 175.3 152 57.9
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 4.5e-42 175.3 111 71.2
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 7.7e-42 174.5 102 76.5
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 1.3e-41 173.7 102 76.5
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 7.2e-40 167.9 116 67.2
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 1.2e-39 167.2 112 68.8
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 1.9e-32 143.3 94 71.3
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 2.1e-31 139.8 124 57.3
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 3.0e-30 136.0 114 57.0
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 2.6e-29 132.9 115 57.4
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 8.3e-28 127.9 113 55.8
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 1.2e-21 107.5 59 84.7
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 6.3e-20 101.7 56 76.8
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 1.2e-18 97.4 53 79.2
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 5.4e-11 72.0 33 93.9
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 2.0e-10 70.1 34 85.3
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 6.0e-10 68.6 43 69.8
QL01p018824 Quercus lobata HOM05D003229 ORTHO05D003835 6.0e-10 68.6 56 75.0
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 1.6e-07 60.5 33 78.8


User provided reference genes

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