Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p049512 Quercus lobata HOM05D006991 ORTHO05D009188 0.0e+00 1350.1 660 100.0
Haze_15467 Corylus avellana HOM05D006991 ORTHO05D009188 0.0e+00 1120.9 652 84.8
Cfa003952 Carpinus fangiana HOM05D006991 ORTHO05D009188 0.0e+00 1082.8 650 82.6
GSVIVG01026850001 Vitis vinifera HOM05D006991 ORTHO05D009188 3.1e-295 1018.1 650 76.9
Potri.002G157400 Populus trichocarpa HOM05D006991 ORTHO05D009188 2.6e-294 1015.0 648 77.3
MD01G1054400 Malus domestica HOM05D006991 ORTHO05D009188 6.3e-288 993.8 636 77.4
Lj3g0006815 Lotus japonicus HOM05D006991 ORTHO05D009188 1.4e-287 992.6 656 75.0
Prupe.2G164100 Prunus persica HOM05D006991 ORTHO05D009188 4.1e-287 991.1 653 77.0
Ciclev10019238m.g Citrus clementina HOM05D006991 ORTHO05D009188 2.6e-286 988.4 649 75.8
TPR.G4402 Trifolium pratense HOM05D006991 ORTHO05D009188 4.5e-286 987.6 649 74.1
FAN03G2057 Fragaria x ananassa HOM05D006991 ORTHO05D009188 5.9e-286 987.3 651 76.0
RcHm_v2.0_Chr1g0354041 Rosa chinensis HOM05D006991 ORTHO05D009188 1.7e-285 985.7 650 76.0
FvH4_7g13830 Fragaria vesca HOM05D006991 ORTHO05D009188 3.8e-285 984.6 649 76.4
Glyma.07G073500 Glycine max HOM05D006991 ORTHO05D009188 8.5e-285 983.4 650 75.2
TWI23G0867 Tripterygium wilfordii HOM05D006991 ORTHO05D009188 6.1e-283 977.2 649 74.4
Duzib138G0243 Durio zibethinus HOM05D006991 ORTHO05D009188 2.3e-282 975.3 650 74.9
Lalb_Chr04g0256761 Lupinus albus HOM05D006991 ORTHO05D009188 2.3e-282 975.3 655 74.0
FAN10G0464 Fragaria x ananassa HOM05D006991 ORTHO05D009188 2.0e-281 972.2 676 73.5
CANSAT56G3382 Cannabis sativa HOM05D006991 ORTHO05D009188 4.8e-280 967.6 655 73.0
FAN06G2381 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.8e-279 965.7 687 72.1
Medtr8g031480 Medicago truncatula HOM05D006991 ORTHO05D009188 4.5e-278 961.1 653 72.3
Thecc.01G363100 Theobroma cacao HOM05D006991 ORTHO05D009188 1.1e-276 956.4 648 74.2
COL.COLO4_12678 Corchorus olitorius HOM05D006991 ORTHO05D009188 1.9e-276 955.7 651 72.7
Dinv43786 Davidia involucrata HOM05D006991 ORTHO05D009188 9.4e-276 953.4 652 73.3
VMungo0331G1855 Vigna mungo HOM05D006991 ORTHO05D009188 6.1e-275 950.7 634 74.6
FAN06G3007 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.4e-274 949.5 675 72.3
FAN01G0340 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.5e-273 946.0 675 72.1
Nn6g33525 Nelumbo nucifera HOM05D006991 ORTHO05D009188 2.6e-273 945.3 649 70.1
Atru.chr5.484 Acer truncatum HOM05D006991 ORTHO05D009188 7.7e-270 933.7 608 75.3
Gohir.D07G148700 Gossypium hirsutum HOM05D006991 ORTHO05D009188 2.2e-264 915.6 646 71.1
Gorai.001G170100 Gossypium raimondii HOM05D006991 ORTHO05D009188 2.2e-264 915.6 646 70.9
Lj9A581T68 Lonicera japonica HOM05D006991 ORTHO05D009188 1.4e-258 896.3 644 68.0
CSS0011179 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 4.4e-257 891.3 642 69.3
AUR62004323 Chenopodium quinoa HOM05D006991 ORTHO05D009188 4.4e-257 891.3 648 67.4
AT1G01770 Arabidopsis thaliana HOM05D006991 ORTHO05D009188 3.7e-256 888.3 637 69.5
Eucgr.E00177 Eucalyptus grandis HOM05D006991 ORTHO05D009188 4.8e-256 887.9 675 66.4
BolC8t52898H Brassica oleracea HOM05D006991 ORTHO05D009188 3.1e-255 885.2 649 68.7
DCAR_015941 Daucus carota HOM05D006991 ORTHO05D009188 3.1e-255 885.2 642 67.6
Sp1g00530 Schrenkiella parvula HOM05D006991 ORTHO05D009188 4.1e-255 884.8 641 68.5
ClCG05G001680 Citrullus lanatus HOM05D006991 ORTHO05D009188 1.6e-254 882.9 657 67.9
Sed0028010 Sechium edule HOM05D006991 ORTHO05D009188 2.0e-254 882.5 653 68.3
Gohir.A07G142900 Gossypium hirsutum HOM05D006991 ORTHO05D009188 4.5e-254 881.3 648 69.0
HanXRQChr04g0121651 Helianthus annuus HOM05D006991 ORTHO05D009188 4.5e-254 881.3 642 67.1
Nitab4.5_0002160g0070 Nicotiana tabacum HOM05D006991 ORTHO05D009188 5.9e-254 880.9 644 68.3
Nitab4.5_0009210g0040 Nicotiana tabacum HOM05D006991 ORTHO05D009188 5.9e-254 880.9 644 68.2
AL1G10570 Arabidopsis lyrata HOM05D006991 ORTHO05D009188 1.3e-253 879.8 641 69.1
Ah.05g176510 Amaranthus hybridus HOM05D006991 ORTHO05D009188 3.8e-253 878.2 647 66.6
Thhalv10007047m.g Eutrema salsugineum HOM05D006991 ORTHO05D009188 3.8e-253 878.2 648 67.7
MSTRG.28216 Avicennia marina HOM05D006991 ORTHO05D009188 5.0e-253 877.9 642 67.9
Aqoxy5G03423_Aqoxy5G03424 Aquilegia oxysepala HOM05D006991 ORTHO05D009188 1.1e-252 876.7 646 67.3
PGR042G0621 Punica granatum HOM05D006991 ORTHO05D009188 1.1e-252 876.7 649 65.0
CAN.G78.50 Capsicum annuum HOM05D006991 ORTHO05D009188 2.5e-252 875.5 644 67.5
Aa31LG1G11140 Aethionema arabicum HOM05D006991 ORTHO05D009188 5.5e-252 874.4 650 67.2
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 5.5e-252 874.4 659 66.9
BraA09t42261Z Brassica rapa HOM05D006991 ORTHO05D009188 5.5e-252 874.4 657 67.0
ATR0680G083 Amborella trichopoda HOM05D006991 ORTHO05D009188 9.5e-252 873.6 653 66.0
Cpa.g.sc18.226 Carica papaya HOM05D006991 ORTHO05D009188 9.5e-252 873.6 665 67.5
PSO063G6634 Papaver somniferum HOM05D006991 ORTHO05D009188 9.5e-252 873.6 650 67.5
THA.LOC104801448 Tarenaya hassleriana HOM05D006991 ORTHO05D009188 2.1e-251 872.5 649 67.5
PGSC0003DMG400000156 Solanum tuberosum HOM05D006991 ORTHO05D009188 1.8e-250 869.4 639 67.4
Rhsim07G0017800 Rhododendron simsii HOM05D006991 ORTHO05D009188 5.2e-250 867.8 635 68.2
Cc02_g37710 Coffea canephora HOM05D006991 ORTHO05D009188 8.8e-250 867.1 645 66.5
Hma1.2p1_0001F.1_g001590 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 2.6e-249 865.5 641 67.6
Lsat_1_v5_gn_7_5201 Lactuca sativa HOM05D006991 ORTHO05D009188 4.4e-249 864.8 645 66.7
Peaxi162Scf00020g00011 Petunia axillaris HOM05D006991 ORTHO05D009188 1.3e-248 863.2 666 65.3
CDE05G1529 Ceratophyllum demersum HOM05D006991 ORTHO05D009188 1.7e-248 862.8 643 65.9
Psat4g154080 Pisum sativum HOM05D006991 ORTHO05D009188 3.7e-248 861.7 595 71.1
Sopen01g038120 Solanum pennellii HOM05D006991 ORTHO05D009188 4.9e-248 861.3 645 67.0
Carub.0001s0044 Capsella rubella HOM05D006991 ORTHO05D009188 5.4e-247 857.8 647 66.6
MELO3C006127.2 Cucumis melo HOM05D006991 ORTHO05D009188 5.4e-247 857.8 650 66.6
CSS0000914 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 1.6e-246 856.3 637 67.7
Migut.N01431 Erythranthe guttata HOM05D006991 ORTHO05D009188 3.8e-245 851.7 656 64.3
Solyc01g094330.3 Solanum lycopersicum HOM05D006991 ORTHO05D009188 1.5e-244 849.7 669 64.3
SGA_v2.0_scaffold43G16441 Striga asiatica HOM05D006991 ORTHO05D009188 4.0e-242 841.6 642 65.4
CsaV3_3G009060 Cucumis sativus L. HOM05D006991 ORTHO05D009188 8.9e-242 840.5 644 66.8
Hund27298 Selenicereus undatus HOM05D006991 ORTHO05D002850 4.4e-241 838.2 647 65.1
ECA236G3544 Erigeron canadensis HOM05D006991 ORTHO05D009188 4.9e-240 834.7 644 65.4
SalBow5G3488 Salvia bowleyana HOM05D006991 ORTHO05D009188 3.2e-239 832.0 661 63.5
SalBow5G3803 Salvia bowleyana HOM05D006991 ORTHO05D009188 3.2e-239 832.0 661 63.5
Sc26g0001000 Simmondsia chinensis HOM05D006991 ORTHO05D009188 5.4e-239 831.2 639 66.0
Os07g0457300 Oryza sativa ssp. japonica HOM05D006991 ORTHO05D009188 1.7e-237 826.2 650 63.2
vmacro13305 Vaccinium macrocarpon HOM05D006991 ORTHO05D009188 2.3e-237 825.9 684 62.7
Zm00001eb306550 Zea mays HOM05D006991 ORTHO05D009188 1.8e-234 816.2 644 62.4
CiPaw.02G028700 Carya illinoinensis HOM05D006991 ORTHO05D009188 1.5e-228 796.6 458 84.9
arahy.Tifrunner.gnm1.ann1.NT7Z8Q Arachis hypogaea HOM05D006991 ORTHO05D009188 5.1e-221 771.5 648 61.7
HPP92_004979 Vanilla planifolia HOM05D006991 ORTHO05D009188 2.8e-219 765.8 649 59.3
EL10Ac1g00536 Beta vulgaris HOM05D006991 ORTHO05D009188 3.1e-218 762.3 651 60.1
Hma1.2p1_0001F.1_g001600 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 7.8e-214 747.7 498 73.3
Actinidia10005 Actinidia chinensis HOM05D006991 ORTHO05D009188 2.0e-201 706.4 552 64.9
unitig_748.g7107 Utricularia gibba HOM05D006991 ORTHO05D009188 1.1e-199 700.7 603 59.4
arahy.Tifrunner.gnm1.ann1.JH251T Arachis hypogaea HOM05D006991 ORTHO05D009188 1.6e-195 686.8 648 57.3
SMO164G0214 Selaginella moellendorffii HOM05D006991 ORTHO05D009188 4.9e-184 648.7 629 53.3
Ca_23659_v3 Cicer arietinum L. HOM05D006991 ORTHO05D009188 7.1e-183 644.8 621 55.7
Pp3c9_2540 Physcomitrium patens HOM05D006991 ORTHO05D009188 1.2e-182 644.0 623 53.5
Phvul.010G096000 Phaseolus vulgaris HOM05D006991 ORTHO05D009188 1.7e-176 623.6 368 80.4
MBI18_g09765_MAGBIO Magnolia biondii HOM05D006991 ORTHO05D009188 3.0e-173 612.8 507 61.1
CARHR000550 Cardamine hirsuta HOM05D006991 ORTHO05D009188 2.9e-160 569.7 432 64.8
Manes.01G259800 Manihot esculenta HOM05D006991 ORTHO05D009188 2.0e-156 557.0 339 79.1
TAR375G0043 Trochodendron aralioides HOM05D006991 ORTHO05D009188 6.1e-150 535.4 335 76.7
AagrBONN_evm.TU.Sc2ySwM_344.4948 Anthoceros agrestis HOM05D006991 ORTHO05D009188 4.0e-133 479.6 470 50.9
RcHm_v2.0_Chr1g0354021 Rosa chinensis HOM05D006991 ORTHO05D009188 1.5e-119 434.5 427 56.2
QL09p021383 Quercus lobata HOM05D006991 ORTHO05D009188 6.0e-89 332.8 165 99.4
Sabra02G0125100 Salix brachista HOM05D006991 ORTHO05D009188 4.2e-82 310.1 194 79.4
EL10Ac1g02136 Beta vulgaris HOM05D006991 ORTHO05D009188 9.3e-82 308.9 271 57.6
EL10Ac3g06779 Beta vulgaris HOM05D006991 ORTHO05D009188 7.9e-73 279.3 187 66.3
HanXRQChr01g0021681 Helianthus annuus HOM05D006991 ORTHO05D009188 1.7e-59 235.0 205 59.5
EL10Ac5g11247 Beta vulgaris HOM05D006991 ORTHO05D009188 3.1e-53 214.2 190 55.3
Ca_23662_v3 Cicer arietinum L. HOM05D006991 ORTHO05D028457 2.6e-52 211.1 158 67.7
AUR62033321 Chenopodium quinoa HOM05D006991 ORTHO05D028457 3.9e-48 197.2 161 62.7
AUR62003727 Chenopodium quinoa HOM05D001417 ORTHO05D001496 8.2e-46 189.5 127 71.7
PSO782G3099 Papaver somniferum HOM05D006991 ORTHO05D028457 3.2e-42 177.6 185 53.5
HanXRQChr01g0025441 Helianthus annuus HOM05D006991 ORTHO05D009188 2.2e-30 138.3 72 87.5
CAN.G1527.6 Capsicum annuum HOM05D006991 ORTHO05D028457 4.8e-30 137.1 107 63.6
HanXRQChr03g0092981 Helianthus annuus HOM05D006991 ORTHO05D226355 5.9e-28 130.2 114 58.8
CAN.G226.8 Capsicum annuum HOM05D006991 ORTHO05D000001 9.8e-23 112.8 63 82.5
AUR62036784 Chenopodium quinoa HOM05D006991 ORTHO05D138340 6.3e-22 110.2 77 64.9


User provided reference genes

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