Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p047080 Quercus lobata HOM05D009241 ORTHO05D011050 8.2e-38 159.8 78 100.0
Haze_15728 Corylus avellana HOM05D009241 ORTHO05D011050 1.4e-13 79.3 70 58.6
FAN10G2033 Fragaria x ananassa HOM05D009241 ORTHO05D011050 1.8e-13 79.0 80 52.5
FAN03G1494 Fragaria x ananassa HOM05D009241 ORTHO05D011050 7.0e-13 77.0 80 52.5
Cfa003740 Carpinus fangiana HOM05D009241 ORTHO05D011050 2.7e-12 75.1 70 55.7
FvH4_7g17570 Fragaria vesca HOM05D009241 ORTHO05D011050 4.6e-12 74.3 77 53.2
FAN01G0542 Fragaria x ananassa HOM05D009241 ORTHO05D011050 4.6e-12 74.3 79 50.6
FAN06G1774 Fragaria x ananassa HOM05D009241 ORTHO05D011050 4.6e-12 74.3 77 53.2
FAN06G2855 Fragaria x ananassa HOM05D009241 ORTHO05D011050 4.6e-12 74.3 77 53.2
ClCG06G002840 Citrullus lanatus HOM05D009241 ORTHO05D011050 7.8e-12 73.6 73 49.3
Potri.002G179000 Populus trichocarpa HOM05D009241 ORTHO05D011050 7.8e-12 73.6 81 51.9
MELO3C022243.2 Cucumis melo HOM05D009241 ORTHO05D011050 2.3e-11 72.0 72 47.2
Prupe.2G197000 Prunus persica HOM05D009241 ORTHO05D011050 2.9e-11 71.6 79 50.6
Potri.014G105000 Populus trichocarpa HOM05D009241 ORTHO05D011050 8.6e-11 70.1 79 49.4
Atru.chr5.761 Acer truncatum HOM05D009241 ORTHO05D011050 1.5e-10 69.3 85 45.9
TAR636G1094 Trochodendron aralioides HOM05D009241 ORTHO05D011050 2.5e-10 68.6 76 48.7
Manes.01G240500 Manihot esculenta HOM05D009241 ORTHO05D011050 4.3e-10 67.8 81 42.0
Duzib138G0295 Durio zibethinus HOM05D019631 ORTHO05D011050 7.3e-10 67.0 83 43.4
Eucgr.H01937 Eucalyptus grandis HOM05D009241 ORTHO05D011050 2.1e-09 65.5 77 44.2
Eucgr.H01935 Eucalyptus grandis HOM05D009241 ORTHO05D011050 1.4e-08 62.8 75 41.3
Cpa.g.sc1471.1 Carica papaya HOM05D009241 ORTHO05D011050 1.8e-08 62.4 79 45.6
Sabra14G0077400 Salix brachista HOM05D009241 ORTHO05D011050 1.2e-07 59.7 78 42.3
Actinidia28089 Actinidia chinensis HOM05D009241 ORTHO05D011050 1.5e-07 59.3 74 50.0
Gohir.A12G116400 Gossypium hirsutum HOM05D019631 ORTHO05D011050 1.5e-07 59.3 89 39.3
Gohir.D12G119900 Gossypium hirsutum HOM05D019631 ORTHO05D011050 1.5e-07 59.3 89 39.3
Thecc.01G334000 Theobroma cacao HOM05D019631 ORTHO05D011050 2.6e-07 58.5 72 40.3
TAR629G1169 Trochodendron aralioides HOM05D009241 ORTHO05D011050 2.6e-07 58.5 76 39.5
Gorai.008G130500 Gossypium raimondii HOM05D019631 ORTHO05D011050 4.4e-07 57.8 89 38.2
BcaC02g10264 Brassica carinata HOM05D010930 ORTHO05D012996 5.8e-07 57.4 83 42.2
C04p30970 Brassica napus HOM05D010930 ORTHO05D012996 5.8e-07 57.4 83 42.2
BolC4t24616H Brassica oleracea HOM05D010930 ORTHO05D012996 5.8e-07 57.4 83 42.2
A04p00840 Brassica napus HOM05D010930 ORTHO05D012996 7.5e-07 57.0 83 42.2
BraA04t15801Z Brassica rapa HOM05D010930 ORTHO05D012996 7.5e-07 57.0 83 42.2
Nn3g18860 Nelumbo nucifera HOM05D009241 ORTHO05D011050 1.3e-06 56.2 84 39.3
Prupe.2G197100 Prunus persica HOM05D009241 ORTHO05D011050 1.7e-06 55.8 77 45.5
Lalb_Chr18g0044691 Lupinus albus HOM05D009241 ORTHO05D011050 2.9e-06 55.1 65 46.2
COL.COLO4_06207 Corchorus olitorius HOM05D019631 ORTHO05D011050 6.4e-06 53.9 50 46.0
Glyma.03G260800 Glycine max HOM05D009241 ORTHO05D011050 6.4e-06 53.9 75 41.3
Ca_09544_v3 Cicer arietinum L. HOM05D009241 ORTHO05D011050 8.3e-06 53.5 77 41.6


User provided reference genes

Program Settings