Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p046777 Quercus lobata HOM05D007943 ORTHO05D010047 3.6e-64 248.1 121 100.0
Cfa003750 Carpinus fangiana HOM05D007943 ORTHO05D010047 5.6e-33 144.4 98 71.4
CiPaw.01G081100 Carya illinoinensis HOM05D007943 ORTHO05D010047 5.7e-30 134.4 103 66.0
Haze_15717 Corylus avellana HOM05D007943 ORTHO05D010047 2.2e-29 132.5 97 66.0
Prupe.2G195800 Prunus persica HOM05D007943 ORTHO05D010047 5.8e-22 107.8 85 56.5
Atru.chr5.749 Acer truncatum HOM05D007943 ORTHO05D010047 9.8e-22 107.1 79 57.0
Duzib133G1419 Durio zibethinus HOM05D007943 ORTHO05D010047 2.2e-21 105.9 111 52.3
Gohir.D07G139100 Gossypium hirsutum HOM05D007943 ORTHO05D010047 1.9e-20 102.8 81 58.0
Gorai.001G151200 Gossypium raimondii HOM05D007943 ORTHO05D010047 1.9e-20 102.8 81 58.0
Ciclev10022962m.g Citrus clementina HOM05D007943 ORTHO05D010047 2.4e-20 102.4 99 49.5
RcHm_v2.0_Chr1g0360861 Rosa chinensis HOM05D007943 ORTHO05D010047 5.4e-20 101.3 103 49.5
Gohir.A07G134500 Gossypium hirsutum HOM05D007943 ORTHO05D010047 9.2e-20 100.5 81 56.8
MD01G1087200 Malus domestica HOM05D007943 ORTHO05D010047 1.2e-19 100.1 81 56.8
Potri.014G104100 Populus trichocarpa HOM05D007943 ORTHO05D010047 1.6e-19 99.8 93 51.6
Manes.05G017800 Manihot esculenta HOM05D007943 ORTHO05D010047 2.7e-19 99.0 108 47.2
GSVIVG01027420001 Vitis vinifera HOM05D007943 ORTHO05D010047 3.5e-19 98.6 82 53.7
Thecc.01G335100 Theobroma cacao HOM05D007943 ORTHO05D010047 2.3e-18 95.9 67 61.2
CSS0046577 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 5.0e-18 94.7 110 45.5
MD07G1157400 Malus domestica HOM05D007943 ORTHO05D010047 6.6e-18 94.4 85 52.9
Potri.002G177700 Populus trichocarpa HOM05D007943 ORTHO05D010047 8.6e-18 94.0 90 48.9
Manes.01G241300 Manihot esculenta HOM05D007943 ORTHO05D010047 1.1e-17 93.6 98 44.9
FvH4_7g17420 Fragaria vesca HOM05D007943 ORTHO05D010047 1.5e-17 93.2 104 47.1
FAN06G1823 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.5e-17 93.2 104 47.1
Gohir.D11G104700 Gossypium hirsutum HOM05D007943 ORTHO05D010047 2.5e-17 92.4 77 55.8
CSS0001750 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 3.3e-17 92.0 96 46.9
Glyma.16G020300 Glycine max HOM05D007943 ORTHO05D010047 3.3e-17 92.0 98 45.9
FAN03G2903 Fragaria x ananassa HOM05D007943 ORTHO05D010047 4.3e-17 91.7 84 52.4
Lalb_Chr10g0100821 Lupinus albus HOM05D007943 ORTHO05D010047 4.3e-17 91.7 83 50.6
Gohir.A11G100000 Gossypium hirsutum HOM05D007943 ORTHO05D010047 7.3e-17 90.9 66 63.6
Gorai.007G112000 Gossypium raimondii HOM05D007943 ORTHO05D010047 7.3e-17 90.9 66 63.6
FAN10G1708 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.6e-16 89.7 104 46.2
Oeu042966.1 Olea europaea HOM05D007943 ORTHO05D010047 2.1e-16 89.4 81 49.4
Sabra02G0135900 Salix brachista HOM05D007943 ORTHO05D010047 2.1e-16 89.4 90 46.7
TAR629G3284 Trochodendron aralioides HOM05D007943 ORTHO05D010047 2.1e-16 89.4 95 46.3
FAN01G2944 Fragaria x ananassa HOM05D007943 ORTHO05D010047 2.8e-16 89.0 104 45.2
COL.COLO4_06217 Corchorus olitorius HOM05D007943 ORTHO05D010047 3.6e-16 88.6 99 43.4
FAN10G0207 Fragaria x ananassa HOM05D007943 ORTHO05D010047 3.6e-16 88.6 104 45.2
Medtr8g024630 Medicago truncatula HOM05D007943 ORTHO05D010047 6.2e-16 87.8 80 47.5
Psat4g217240 Pisum sativum HOM05D007943 ORTHO05D010047 8.1e-16 87.4 78 48.7
Glyma.07G051200 Glycine max HOM05D007943 ORTHO05D010047 1.1e-15 87.0 90 47.8
TPR.G25267 Trifolium pratense HOM05D007943 ORTHO05D010047 1.4e-15 86.7 84 46.4
MELO3C005988.2 Cucumis melo HOM05D007943 ORTHO05D010047 5.2e-15 84.7 87 46.0
Lj3g0013373 Lotus japonicus HOM05D007943 ORTHO05D010047 2.0e-14 82.8 99 40.4
CsaV3_3G007690 Cucumis sativus L. HOM05D007943 ORTHO05D010047 2.6e-14 82.4 87 44.8
Nn3g18838 Nelumbo nucifera HOM05D007943 ORTHO05D010047 3.4e-14 82.0 82 51.2
Sed0006019 Sechium edule HOM05D007943 ORTHO05D010047 3.4e-14 82.0 77 48.1
Lalb_Chr02g0157681 Lupinus albus HOM05D007943 ORTHO05D010047 7.5e-14 80.9 86 43.0
TPR.G4732 Trifolium pratense HOM05D007943 ORTHO05D010047 2.2e-13 79.3 92 42.4
Hund16743 Selenicereus undatus HOM05D007943 ORTHO05D010047 8.3e-13 77.4 62 54.8
Phvul.006G116500 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 1.4e-12 76.6 96 43.8
TAR375G0647 Trochodendron aralioides HOM05D007943 ORTHO05D010047 1.4e-12 76.6 70 50.0
arahy.Tifrunner.gnm1.ann1.FJCJ23 Arachis hypogaea HOM05D007943 ORTHO05D010047 4.1e-12 75.1 91 44.0
AL1G11360 Arabidopsis lyrata HOM05D007943 ORTHO05D010047 9.2e-12 73.9 66 48.5
BolC8t52866H Brassica oleracea HOM05D007943 ORTHO05D010047 1.6e-11 73.2 77 40.3
Glyma.03G260100 Glycine max HOM05D007943 ORTHO05D010047 2.7e-11 72.4 70 45.7
Rhsim01G0178600 Rhododendron simsii HOM05D007943 ORTHO05D010047 3.5e-11 72.0 90 43.3
A09p68930 Brassica napus HOM05D007943 ORTHO05D010047 6.0e-11 71.2 78 41.0
Carub.0001s0107 Capsella rubella HOM05D007943 ORTHO05D010047 7.8e-11 70.9 57 50.9
Glyma.19G259000 Glycine max HOM05D007943 ORTHO05D010047 1.0e-10 70.5 60 46.7
Phvul.010G118200 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 1.7e-10 69.7 54 55.6
AUR62004549 Chenopodium quinoa HOM05D007943 ORTHO05D010047 2.3e-10 69.3 113 38.1
Sc23g0001870 Simmondsia chinensis HOM05D007943 ORTHO05D010047 3.0e-10 68.9 70 48.6
Aqoxy7G00012 Aquilegia oxysepala HOM05D007943 ORTHO05D010047 6.6e-10 67.8 72 47.2
DCAR_006654 Daucus carota HOM05D007943 ORTHO05D010047 8.6e-10 67.4 51 49.0
ClCG05G000500 Citrullus lanatus HOM05D007943 ORTHO05D010047 1.9e-09 66.2 66 43.9
CsaV3_3G007710 Cucumis sativus L. HOM05D007943 ORTHO05D010047 2.5e-09 65.9 77 41.6
Sed0008180 Sechium edule HOM05D007943 ORTHO05D010047 4.3e-09 65.1 50 52.0
HPP92_015077 Vanilla planifolia HOM05D000968 ORTHO05D001687 1.1e-07 60.5 51 49.0
Os03g0126900 Oryza sativa ssp. japonica HOM05D007943 ORTHO05D010047 3.1e-07 58.9 68 39.7
Solyc10g009260.1 Solanum lycopersicum HOM05D007943 ORTHO05D010047 1.2e-06 57.0 43 48.8
Os04g0577375 Oryza sativa ssp. japonica HOM05D007943 ORTHO05D010047 3.4e-06 55.5 57 43.9
Zm00001eb073340 Zea mays HOM05D007943 ORTHO05D010047 7.6e-06 54.3 59 40.7


User provided reference genes

Program Settings