Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 0.0e+00 2141.3 1093 100.0
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 0.0e+00 1825.1 1072 85.2
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 0.0e+00 1799.6 1103 82.6
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 0.0e+00 1727.2 1072 79.5
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 0.0e+00 1707.6 1073 78.7
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 0.0e+00 1700.6 1078 78.0
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 0.0e+00 1683.3 1074 78.2
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 0.0e+00 1677.5 1072 78.7
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 0.0e+00 1675.6 1076 77.3
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 0.0e+00 1670.6 1075 77.1
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 0.0e+00 1660.2 1063 77.7
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1660.2 1068 77.0
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 0.0e+00 1658.3 1079 76.6
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 0.0e+00 1658.3 1076 77.5
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 0.0e+00 1654.8 1062 78.0
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 0.0e+00 1651.0 1083 77.0
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 0.0e+00 1649.8 1072 76.8
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1646.7 1069 77.1
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 0.0e+00 1639.8 1077 77.0
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 0.0e+00 1638.2 1073 76.8
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 0.0e+00 1636.3 1067 75.6
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1634.4 1093 75.1
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1634.0 1069 76.1
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 0.0e+00 1632.1 1061 77.9
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1632.1 1060 76.6
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 0.0e+00 1630.9 1067 74.8
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1629.4 1067 75.7
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1625.5 1063 76.6
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 0.0e+00 1625.5 1069 75.8
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 0.0e+00 1620.9 1068 75.6
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1620.9 1067 75.2
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 0.0e+00 1620.5 1071 74.8
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1620.1 1067 75.1
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1616.7 1065 76.3
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 0.0e+00 1615.9 1065 76.2
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 0.0e+00 1612.0 1067 75.4
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 0.0e+00 1609.0 1082 75.7
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 0.0e+00 1609.0 1076 74.4
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1605.1 1067 75.7
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1604.0 1067 75.6
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 0.0e+00 1602.8 1075 74.0
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1597.4 1067 75.4
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 0.0e+00 1595.9 1073 76.1
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 0.0e+00 1594.7 1068 75.1
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 0.0e+00 1590.9 1071 75.0
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1586.2 1104 72.8
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 0.0e+00 1578.1 1074 74.3
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1573.1 1071 74.7
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 0.0e+00 1572.0 1073 73.0
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 0.0e+00 1568.5 1070 74.6
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 0.0e+00 1567.4 1078 73.2
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 0.0e+00 1564.7 1065 74.1
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 0.0e+00 1563.5 1065 74.4
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 0.0e+00 1562.4 1077 73.7
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 0.0e+00 1556.2 1065 73.6
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 0.0e+00 1555.8 1073 72.8
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 0.0e+00 1555.8 1065 74.2
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 0.0e+00 1554.7 1065 74.0
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 0.0e+00 1551.6 1065 73.9
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1548.5 1077 72.6
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 0.0e+00 1547.7 1073 72.5
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 0.0e+00 1547.7 1069 73.1
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 0.0e+00 1546.2 1071 73.6
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 0.0e+00 1545.8 1063 74.0
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1544.6 1066 72.2
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1543.1 1073 72.3
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1542.7 1077 72.9
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 0.0e+00 1540.0 1073 72.0
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 0.0e+00 1540.0 1061 74.3
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 0.0e+00 1537.3 968 80.2
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 0.0e+00 1536.9 1066 71.3
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1536.5 1065 73.5
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1536.5 1076 73.0
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 0.0e+00 1530.4 1064 72.7
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 0.0e+00 1529.6 1079 72.2
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 0.0e+00 1523.8 1062 73.7
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 0.0e+00 1517.3 1071 72.0
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 0.0e+00 1510.0 1070 70.9
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 0.0e+00 1506.5 1068 71.4
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 0.0e+00 1482.2 1066 71.5
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1477.6 1065 71.7
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 0.0e+00 1477.2 1204 64.9
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 0.0e+00 1436.0 942 76.3
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 0.0e+00 1421.0 1118 65.9
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 0.0e+00 1410.2 1076 67.6
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 0.0e+00 1403.3 1072 65.5
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 0.0e+00 1401.0 1077 68.6
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1400.6 949 74.8
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 0.0e+00 1384.0 1068 65.5
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 0.0e+00 1328.9 1066 62.7
CiPaw.02G042200 Carya illinoinensis HOM05D006425 ORTHO05D007312 0.0e+00 1322.4 760 86.2
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 0.0e+00 1318.9 1191 58.4
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 0.0e+00 1207.6 1063 58.5
Prupe.2G192700 Prunus persica HOM05D006425 ORTHO05D007312 0.0e+00 1205.7 756 78.7
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1197.6 956 66.6
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1191.0 1078 61.5
EL10Ac1g00230 Beta vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1137.5 755 76.3
Gohir.A12G113700 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1076.2 719 75.7
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 2.5e-289 999.2 1076 49.9
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 6.3e-285 984.6 1014 57.3
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 2.2e-266 922.9 1069 48.1
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 5.0e-250 868.6 604 72.5
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 1.4e-239 833.9 716 61.3
BcaC07g42431 Brassica carinata HOM05D006425 ORTHO05D007312 5.1e-234 815.5 539 75.1
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis HOM05D006425 ORTHO05D007312 1.6e-224 783.9 1026 44.5
Sed0002059 Sechium edule HOM05D006425 ORTHO05D007312 2.8e-200 703.4 656 58.4
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 6.2e-200 702.2 499 69.3
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 2.4e-183 647.1 1512 33.3
Sopen01g039890 Solanum pennellii HOM05D006425 ORTHO05D007312 1.9e-172 610.9 401 77.1
Gohir.A12G113750 Gossypium hirsutum HOM05D006425 ORTHO05D007312 3.0e-138 497.3 331 75.5
Hma1.2p1_0180F.1_g079620 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 9.0e-90 336.3 203 79.8
MD01G1085000 Malus domestica HOM05D006425 ORTHO05D007312 1.4e-63 249.2 163 72.4
Hma1.2p1_0180F.1_g079630 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 3.1e-34 151.8 92 77.2
SEGI_38786 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 1.5e-23 116.3 59 86.4
Actinidia20216 Actinidia chinensis HOM05D006425 ORTHO05D007312 5.8e-20 104.4 54 85.2
VMungo0720G2246 Vigna mungo HOM05D006425 ORTHO05D007312 1.3e-16 93.2 65 64.6
CSS0018706 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 1.7e-11 76.3 54 63.0
CSS0027474 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 1.7e-11 76.3 54 63.0
TPR.G10878 Trifolium pratense HOM05D020190 ORTHO05D018030 8.3e-11 73.9 74 54.1
TPR.G39590 Trifolium pratense HOM05D020190 ORTHO05D018030 1.9e-10 72.8 74 52.7
CSS0040683 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 7.0e-10 70.9 40 80.0
MCO11G284 Micromonas commoda HOM05D006425 ORTHO05D007312 2.1e-09 69.3 526 20.3


User provided reference genes

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