Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p045811 Quercus lobata HOM05D031275 ORTHO05D000167 1.5e-104 382.9 195 100.0
QL10p030412 Quercus lobata HOM05D000003 ORTHO05D000167 2.3e-65 252.7 242 60.3
QL12p001149 Quercus lobata HOM05D000003 ORTHO05D000167 5.8e-56 221.5 209 60.3
QL04p022409 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-34 149.8 222 42.8
QL05p007523 Quercus lobata HOM05D000003 ORTHO05D000167 2.5e-27 126.3 205 39.0
QL09p011252 Quercus lobata HOM05D000003 ORTHO05D000167 8.4e-23 111.3 210 36.7
QL09p043312 Quercus lobata HOM05D000003 ORTHO05D000167 1.9e-22 110.2 208 34.1
QL07p011546 Quercus lobata HOM05D000003 ORTHO05D000167 7.4e-19 98.2 151 41.1
QL08p031025 Quercus lobata HOM05D000003 ORTHO05D000004 2.8e-18 96.3 241 29.9
QL05p042365 Quercus lobata HOM05D000003 ORTHO05D000167 9.0e-17 91.3 190 33.2
QL11p056556 Quercus lobata HOM05D000003 ORTHO05D000167 9.9e-16 87.8 208 29.3
QL02p034159 Quercus lobata HOM05D016498 ORTHO05D000167 2.9e-15 86.3 81 56.8
QL03p054973 Quercus lobata HOM05D016498 ORTHO05D000167 3.8e-15 85.9 82 53.7
QL03p066006 Quercus lobata HOM05D001020 ORTHO05D014173 3.2e-14 82.8 186 28.5
QL06p034986 Quercus lobata HOM05D000044 ORTHO05D000051 3.2e-14 82.8 168 34.5
QL08p006218 Quercus lobata HOM05D000003 ORTHO05D000167 3.2e-14 82.8 82 53.7
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 4.2e-14 82.4 213 29.1
QL01p048703 Quercus lobata HOM05D000003 ORTHO05D000167 2.1e-13 80.1 219 27.9
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-12 77.8 212 26.4
QL05p065428 Quercus lobata HOM05D000003 ORTHO05D000004 3.0e-12 76.3 336 24.4
QL12p015728 Quercus lobata HOM05D000003 ORTHO05D000167 3.0e-12 76.3 320 22.8
QL06p048711 Quercus lobata HOM05D000027 ORTHO05D000066 1.5e-11 73.9 165 32.7
QL04p069059 Quercus lobata HOM05D000003 ORTHO05D000167 5.6e-11 72.0 152 30.9
QL10p017193 Quercus lobata HOM05D000003 ORTHO05D000167 5.6e-11 72.0 183 29.5
QL11p000147 Quercus lobata HOM05D000003 ORTHO05D000167 7.4e-11 71.6 167 35.3
QL93p0215_0031 Quercus lobata HOM05D000003 ORTHO05D000167 7.4e-11 71.6 152 30.3
QL04p064882 Quercus lobata HOM05D000003 ORTHO05D000167 1.3e-10 70.9 152 29.6
QL05p012625 Quercus lobata HOM05D000003 ORTHO05D000167 2.1e-10 70.1 214 26.6
QL05p038991 Quercus lobata HOM05D000003 ORTHO05D000167 2.8e-10 69.7 177 27.1
FvH4_7g10254 Fragaria vesca HOM05D008097 ORTHO05D010102 6.2e-10 68.6 150 32.0
QL05p054117 Quercus lobata HOM05D016498 ORTHO05D000167 6.2e-10 68.6 82 50.0
CANSAT64G0935 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-09 67.8 229 24.5
CiPaw.10G104200 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.4e-09 67.4 127 34.6
CANSAT01G0940 Cannabis sativa HOM05D000003 ORTHO05D000167 1.8e-09 67.0 194 27.8
QL05p051227 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-09 67.0 271 22.5
QL07p013368 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-09 67.0 62 46.8
CANSAT01G1506 Cannabis sativa HOM05D000003 ORTHO05D000004 3.1e-09 66.2 181 25.4
QL03p051231 Quercus lobata HOM05D016498 ORTHO05D000167 3.1e-09 66.2 83 47.0
TWI09G0223 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.1e-09 66.2 164 28.7
QL03p029332 Quercus lobata HOM05D000003 ORTHO05D000167 4.0e-09 65.9 121 30.6
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 5.3e-09 65.5 209 27.8
Ah.12g056700 Amaranthus hybridus HOM05D000003 ORTHO05D006737 6.9e-09 65.1 223 29.6
COL.COLO4_13164 Corchorus olitorius HOM05D009774 ORTHO05D000167 2.0e-08 63.5 177 27.7
QL11p056495 Quercus lobata HOM05D000003 ORTHO05D000167 2.6e-08 63.2 160 29.4
QL03p001714 Quercus lobata HOM05D016498 ORTHO05D000004 4.5e-08 62.4 236 27.1
QL05p053348 Quercus lobata HOM05D000003 ORTHO05D000167 5.8e-08 62.0 180 28.9
Atru.chr4.1218 Acer truncatum HOM05D000003 ORTHO05D000167 7.6e-08 61.6 219 31.1
QL01p055468 Quercus lobata HOM05D000003 ORTHO05D000167 7.6e-08 61.6 219 27.4
QL08p018981 Quercus lobata HOM05D000003 ORTHO05D000004 7.6e-08 61.6 179 30.2
Atru.chr5.1598 Acer truncatum HOM05D000856 ORTHO05D000167 1.0e-07 61.2 184 25.0
QL10p052676 Quercus lobata HOM05D000003 ORTHO05D000167 1.0e-07 61.2 211 27.0
Atru.chr10.362 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-07 60.5 207 24.2
EL10Ac7g17531 Beta vulgaris HOM05D000003 ORTHO05D000004 1.7e-07 60.5 193 27.5
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 2.2e-07 60.1 215 23.3
QL08p032776 Quercus lobata HOM05D031275 ORTHO05D337920 2.2e-07 60.1 46 65.2
QL10p031903 Quercus lobata HOM05D000003 ORTHO05D000004 2.2e-07 60.1 281 22.4
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 2.9e-07 59.7 212 26.9
QL06p005642 Quercus lobata HOM05D000003 ORTHO05D000004 3.8e-07 59.3 189 27.0
QL07p015088 Quercus lobata HOM05D000003 ORTHO05D000167 3.8e-07 59.3 169 26.0
FvH4_6g18902 Fragaria vesca HOM05D000003 ORTHO05D010713 4.9e-07 58.9 237 25.7
QL05p060814 Quercus lobata HOM05D000003 ORTHO05D000167 4.9e-07 58.9 149 29.5
CANSAT64G2436 Cannabis sativa HOM05D000003 ORTHO05D000167 6.5e-07 58.5 217 25.3
CANSAT11G1435 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-06 57.8 194 26.3
CANSAT76G0001 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-06 57.8 183 21.9
QL01p014938 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-06 57.8 127 29.1
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-06 57.8 159 27.7
QL09p001270 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-06 57.8 182 23.6
QL04p079954 Quercus lobata HOM05D016498 ORTHO05D000167 1.4e-06 57.4 70 44.3
CANSAT01G0793 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-06 56.6 216 24.5
FvH4_4g27942 Fragaria vesca HOM05D000003 ORTHO05D000022 2.5e-06 56.6 158 31.0
QL03p009351 Quercus lobata HOM05D000003 ORTHO05D000167 2.5e-06 56.6 110 29.1
Atru.chr2.2868 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-06 56.2 187 23.5
CANSAT25G3451 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-06 56.2 253 22.9
FvH4_6g16961 Fragaria vesca HOM05D000003 ORTHO05D000022 3.2e-06 56.2 207 27.5
QL04p043263 Quercus lobata HOM05D042926 ORTHO05D000167 3.2e-06 56.2 72 45.8
CiPaw.16G012000 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.2e-06 55.8 174 28.2
COL.COLO4_35519 Corchorus olitorius HOM05D009774 ORTHO05D000167 4.2e-06 55.8 190 23.7
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 4.2e-06 55.8 150 26.7
Atru.chr6.242 Acer truncatum HOM05D000003 ORTHO05D000006 5.5e-06 55.5 271 22.1
Atru.chr8.782 Acer truncatum HOM05D000003 ORTHO05D000004 5.5e-06 55.5 216 25.0
EL10Ac8g19164 Beta vulgaris HOM05D000003 ORTHO05D000167 5.5e-06 55.5 81 35.8
CSS0016328 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 5.5e-06 55.5 252 25.0
CANSAT35G0158 Cannabis sativa HOM05D000003 ORTHO05D000004 5.5e-06 55.5 35 65.7
CANSAT56G1530 Cannabis sativa HOM05D000003 ORTHO05D000167 5.5e-06 55.5 158 24.1
FvH4_5g30301 Fragaria vesca HOM05D000003 ORTHO05D000022 5.5e-06 55.5 126 32.5
Atru.chr1.2765 Acer truncatum HOM05D000003 ORTHO05D000004 7.1e-06 55.1 219 27.4
EL10Ac9g21339 Beta vulgaris HOM05D000003 ORTHO05D000167 7.1e-06 55.1 218 23.9
CANSAT80G0814 Cannabis sativa HOM05D000003 ORTHO05D000004 7.1e-06 55.1 167 27.5
CANSAT80G2762 Cannabis sativa HOM05D000003 ORTHO05D000167 7.1e-06 55.1 209 21.5
Atru.chr5.2661 Acer truncatum HOM05D000003 ORTHO05D000167 9.3e-06 54.7 202 26.7
EL10Ac5g12505 Beta vulgaris HOM05D000003 ORTHO05D000167 9.3e-06 54.7 170 24.7
QL06p011527 Quercus lobata HOM05D000003 ORTHO05D000167 9.3e-06 54.7 145 26.2
TAR331G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000167 9.3e-06 54.7 159 29.6


User provided reference genes

Program Settings