Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 5.4e-96 354.4 185 100.0
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 9.9e-74 280.4 186 81.7
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 3.8e-73 278.5 226 70.8
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 6.0e-71 271.2 187 78.6
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 5.6e-69 264.6 189 77.2
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 5.3e-67 258.1 189 76.2
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 9.3e-64 247.3 188 74.5
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 4.6e-63 245.0 191 72.8
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 4.6e-63 245.0 190 72.6
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 1.0e-62 243.8 189 73.5
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 3.0e-62 242.3 192 72.4
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 3.9e-62 241.9 184 76.1
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 4.3e-61 238.4 188 73.4
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 5.6e-61 238.0 181 75.1
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 3.4e-58 228.8 192 68.2
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 5.8e-58 228.0 195 67.2
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 1.3e-57 226.9 191 70.2
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 1.7e-57 226.5 175 74.3
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 2.9e-57 225.7 187 70.6
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 1.9e-56 223.0 187 69.0
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 3.2e-56 222.2 195 66.2
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 5.5e-56 221.5 197 66.5
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 5.5e-56 221.5 190 68.9
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 9.3e-56 220.7 188 68.1
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 1.2e-55 220.3 162 75.3
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.6e-55 219.9 191 68.6
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 2.1e-55 219.5 188 67.0
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 3.5e-55 218.8 189 66.7
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 6.0e-55 218.0 186 68.8
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 6.0e-55 218.0 191 69.1
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 7.9e-55 217.6 191 67.0
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 1.0e-54 217.2 188 66.5
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 1.0e-54 217.2 190 66.8
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 1.0e-54 217.2 188 68.6
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 1.3e-54 216.9 186 68.3
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 1.3e-54 216.9 185 65.9
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 3.0e-54 215.7 167 73.1
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 6.7e-54 214.5 188 67.6
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 8.7e-54 214.2 190 66.8
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 1.9e-53 213.0 188 67.6
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 2.5e-53 212.6 190 67.4
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 2.5e-53 212.6 167 72.5
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 3.3e-53 212.2 167 71.9
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 4.3e-53 211.8 180 66.1
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 5.7e-53 211.5 186 67.2
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 9.6e-53 210.7 189 67.2
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 9.6e-53 210.7 121 88.4
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 1.6e-52 209.9 168 70.8
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 3.7e-52 208.8 201 64.7
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 3.7e-52 208.8 191 67.0
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 8.2e-52 207.6 186 65.1
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 2.4e-51 206.1 203 64.5
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 3.1e-51 205.7 186 65.1
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 3.1e-51 205.7 179 64.2
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 4.1e-51 205.3 185 62.7
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 1.5e-50 203.4 184 67.4
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 3.4e-50 202.2 194 67.0
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 2.2e-49 199.5 157 72.6
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 6.5e-49 198.0 219 58.0
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 1.1e-48 197.2 124 85.5
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 3.2e-48 195.7 186 64.5
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 1.6e-47 193.4 189 60.3
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 1.0e-46 190.7 197 62.9
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 1.8e-46 189.9 190 62.1
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 2.3e-46 189.5 196 61.7
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 2.3e-46 189.5 140 72.9
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 3.9e-46 188.7 189 61.4
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 3.9e-46 188.7 189 61.4
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 3.9e-46 188.7 189 61.4
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 1.9e-45 186.4 189 59.8
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 2.5e-45 186.0 187 61.5
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 3.3e-45 185.7 190 59.5
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 5.7e-45 184.9 189 58.7
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 9.7e-45 184.1 193 61.1
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 4.8e-44 181.8 194 60.3
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 6.3e-44 181.4 195 59.5
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 8.2e-44 181.0 122 78.7
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 1.8e-43 179.9 192 57.8
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 4.1e-43 178.7 193 59.1
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 1.2e-42 177.2 194 58.2
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 3.4e-42 175.6 193 57.5
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 1.0e-41 174.1 146 67.1
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 1.0e-41 174.1 204 55.9
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 1.7e-41 173.3 201 57.2
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 2.2e-41 172.9 191 57.6
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 6.5e-41 171.4 120 78.3
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 8.5e-41 171.0 187 57.8
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 1.6e-39 166.8 195 56.9
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 3.9e-38 162.2 97 85.6
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 1.3e-36 157.1 203 51.2
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 1.3e-36 157.1 203 51.2
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 4.8e-36 155.2 126 68.3
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 1.5e-34 150.2 162 54.9
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 2.6e-34 149.4 87 86.2
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 1.0e-33 147.5 99 79.8
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 2.1e-31 139.8 172 50.6
TWI23G0441 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 2.1e-31 139.8 108 71.3
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 6.7e-30 134.8 155 56.8
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 1.1e-29 134.0 124 61.3
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 2.0e-29 133.3 135 55.6
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 5.3e-27 125.2 97 72.2
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 5.3e-27 125.2 133 57.1
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 2.6e-26 122.9 123 58.5
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 5.0e-25 118.6 131 51.9
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 8.5e-25 117.9 120 58.3
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.5e-24 117.1 83 75.9
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.8e-22 110.2 81 75.3
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.8e-22 110.2 81 75.3
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 2.8e-20 102.8 136 45.6
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 2.0e-18 96.7 138 46.4
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 3.5e-18 95.9 111 53.2
Duzib130G0001 Durio zibethinus HOM05D006899 ORTHO05D008566 1.3e-17 94.0 89 65.2
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 1.2e-15 87.4 80 60.0
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 1.6e-15 87.0 121 43.0
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 9.1e-11 71.2 89 48.3
Medtr7g035145 Medicago truncatula HOM05D006899 ORTHO05D008566 7.7e-10 68.2 69 43.5


User provided reference genes

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