Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p044547 Quercus lobata HOM05D041869 ORTHO05D010403 5.7e-77 290.8 143 100.0
QL08p044485 Quercus lobata HOM05D041869 ORTHO05D010403 3.2e-56 221.9 136 84.6
QL08p044457 Quercus lobata HOM05D041869 ORTHO05D010403 3.5e-42 175.3 110 85.5
Prupe.3G259300 Prunus persica HOM05D008847 ORTHO05D000368 2.2e-12 76.3 88 51.1
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.1e-11 73.9 87 49.4
FAN09G2824 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.2e-10 70.5 87 48.3
RcHm_v2.0_Chr2g0167641 Rosa chinensis HOM05D000576 ORTHO05D000368 2.5e-08 62.8 116 34.5
FvH4_6g48151 Fragaria vesca HOM05D000576 ORTHO05D000368 3.3e-08 62.4 103 39.8
CSS0031751 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 5.6e-08 61.6 85 45.9
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 7.3e-08 61.2 101 38.6
RcHm_v2.0_Chr2g0167601 Rosa chinensis HOM05D000576 ORTHO05D000368 1.6e-07 60.1 114 36.8
FAN14G4050 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.1e-07 59.7 85 42.4
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 2.1e-07 59.7 82 46.3
TAR496G0003 Trochodendron aralioides HOM05D000576 ORTHO05D000368 4.7e-07 58.5 91 39.6
TAR629G2683 Trochodendron aralioides HOM05D000576 ORTHO05D000368 4.7e-07 58.5 91 39.6
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 6.2e-07 58.2 80 41.2
FAN10G0882 Fragaria x ananassa HOM05D000576 ORTHO05D000368 6.2e-07 58.2 106 34.9
FvH4_7g27481 Fragaria vesca HOM05D008847 ORTHO05D000368 8.1e-07 57.8 78 41.0
Medtr7g087040 Medicago truncatula HOM05D008175 ORTHO05D010403 1.8e-06 56.6 103 36.9
TAR636G0024 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.8e-06 56.6 90 40.0
FAN09G4808 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.4e-06 56.2 81 43.2
Medtr7g105980 Medicago truncatula HOM05D008175 ORTHO05D010403 2.4e-06 56.2 90 36.7
FAN06G0982 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.1e-06 55.8 106 34.0
FAN05G2407 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.0e-06 55.5 86 41.9
FAN06G2289 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.0e-06 55.5 106 34.0
FAN06G5009 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.0e-06 55.5 78 41.0
CSS0001211 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 6.8e-06 54.7 91 36.3
CSS0005465 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 6.8e-06 54.7 91 36.3
CSS0016406 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 6.8e-06 54.7 91 36.3
FAN14G2737 Fragaria x ananassa HOM05D000385 ORTHO05D000269 6.8e-06 54.7 86 40.7
TAR371G0526 Trochodendron aralioides HOM05D000576 ORTHO05D000368 6.8e-06 54.7 92 40.2
ATR0681G283 Amborella trichopoda HOM05D000312 ORTHO05D000221 8.9e-06 54.3 89 31.5
Cc03_g13650 Coffea canephora HOM05D000576 ORTHO05D000368 8.9e-06 54.3 87 37.9
MBI02_g05996_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D008290 8.9e-06 54.3 131 35.1


User provided reference genes

Program Settings