Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p044079 Quercus lobata HOM05D035806 ORTHO05D011736 3.6e-184 648.3 370 100.0
CiPaw.03G189100 Carya illinoinensis HOM05D035806 ORTHO05D011736 4.3e-68 262.7 370 54.6
Haze_13494 Corylus avellana HOM05D035806 ORTHO05D011736 1.0e-53 214.9 385 47.3
Thecc.01G161600 Theobroma cacao HOM05D015707 ORTHO05D011736 3.5e-30 136.7 351 37.9
Atru.chr6.2095 Acer truncatum HOM05D015707 ORTHO05D011736 2.2e-24 117.5 315 34.6
Duzib187G0630 Durio zibethinus HOM05D015707 ORTHO05D011736 6.5e-24 115.9 355 33.0
Prupe.3G172400 Prunus persica HOM05D015330 ORTHO05D011736 2.8e-19 100.5 342 31.9
GSVIVG01000788001 Vitis vinifera HOM05D015707 ORTHO05D011736 2.8e-19 100.5 271 38.0
Ciclev10033349m.g Citrus clementina HOM05D015707 ORTHO05D011736 3.1e-18 97.1 337 31.8
FAN02G0771 Fragaria x ananassa HOM05D015330 ORTHO05D011736 7.7e-17 92.4 292 33.6
RcHm_v2.0_Chr2g0151471 Rosa chinensis HOM05D015330 ORTHO05D011736 3.8e-16 90.1 349 30.7
Manes.02G084100 Manihot esculenta HOM05D019188 ORTHO05D011736 2.5e-15 87.4 323 32.5
LjContig00310g0023716 Lotus japonicus HOM05D016025 ORTHO05D015993 2.1e-14 84.3 324 31.8
FvH4_6g38210 Fragaria vesca HOM05D015330 ORTHO05D011736 2.7e-14 84.0 276 33.0
MD17G1139600 Malus domestica HOM05D015330 ORTHO05D011736 2.7e-14 84.0 335 28.1
Potri.005G201300 Populus trichocarpa HOM05D019188 ORTHO05D011736 2.5e-12 77.4 321 29.9
Gohir.A11G060400 Gossypium hirsutum HOM05D015707 ORTHO05D011736 3.3e-12 77.0 203 34.5
FAN09G0700 Fragaria x ananassa HOM05D000864 ORTHO05D011736 1.3e-11 75.1 193 33.7
Dinv00978 Davidia involucrata HOM05D021637 ORTHO05D023291 3.7e-11 73.6 287 29.3
Potri.002G060300 Populus trichocarpa HOM05D019188 ORTHO05D011736 1.4e-10 71.6 330 28.2
Manes.01G127200 Manihot esculenta HOM05D019188 ORTHO05D011736 3.4e-09 67.0 179 34.1
Medtr5g091720 Medicago truncatula HOM05D016025 ORTHO05D015993 3.4e-09 67.0 330 26.1
Gorai.007G069700 Gossypium raimondii HOM05D015707 ORTHO05D011736 1.0e-08 65.5 200 35.5
Phvul.008G191200 Phaseolus vulgaris HOM05D016025 ORTHO05D015993 3.8e-08 63.5 268 29.1
Actinidia11203 Actinidia chinensis HOM05D021637 ORTHO05D023291 1.4e-07 61.6 245 31.4
Gohir.D11G064500 Gossypium hirsutum HOM05D015707 ORTHO05D011736 2.5e-07 60.8 200 34.5
Sabra05G0153200 Salix brachista HOM05D019188 ORTHO05D011736 2.5e-07 60.8 332 28.3
CSS0007418 Camellia sinensis var. sinensis HOM05D021637 ORTHO05D023291 4.2e-07 60.1 164 35.4
TPR.G12618 Trifolium pratense HOM05D016025 ORTHO05D015993 5.5e-07 59.7 207 35.3
TWI59G0214 Tripterygium wilfordii HOM05D019188 ORTHO05D011736 5.5e-07 59.7 250 28.4
Ca_06285_v3 Cicer arietinum L. HOM05D016025 ORTHO05D015993 7.2e-07 59.3 313 29.4
Glyma.14G027800 Glycine max HOM05D016025 ORTHO05D015993 1.2e-06 58.5 330 27.0
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 1.6e-06 58.2 138 32.6
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 6.1e-06 56.2 223 28.7
PSO541G1916 Papaver somniferum HOM05D022831 ORTHO05D023597 7.9e-06 55.8 110 34.5


User provided reference genes

Program Settings