Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p043914 Quercus lobata HOM05D005299 ORTHO05D006621 6.1e-202 707.2 346 100.0
Haze_13488 Corylus avellana HOM05D005299 ORTHO05D006621 5.4e-166 587.8 347 80.4
Cfa022915 Carpinus fangiana HOM05D005299 ORTHO05D006621 3.5e-165 585.1 347 80.7
CiPaw.04G135600 Carya illinoinensis HOM05D005299 ORTHO05D006621 8.7e-148 527.3 347 72.0
Ciclev10031926m.g Citrus clementina HOM05D005299 ORTHO05D006621 3.7e-146 521.9 347 72.6
RcHm_v2.0_Chr2g0151151 Rosa chinensis HOM05D005299 ORTHO05D006621 4.5e-144 515.0 346 70.8
Prupe.3G170900 Prunus persica HOM05D005299 ORTHO05D006621 1.7e-143 513.1 346 70.8
CSS0023426 Camellia sinensis var. sinensis HOM05D005299 ORTHO05D006621 2.5e-142 509.2 348 70.7
Thecc.01G160700 Theobroma cacao HOM05D005299 ORTHO05D006621 4.2e-142 508.4 347 70.9
FAN14G2921 Fragaria x ananassa HOM05D005299 ORTHO05D006621 2.1e-141 506.1 346 70.2
FAN05G0697 Fragaria x ananassa HOM05D005299 ORTHO05D006621 4.6e-141 505.0 346 70.5
COL.COLO4_33736 Corchorus olitorius HOM05D005299 ORTHO05D006621 7.9e-141 504.2 347 70.9
FvH4_6g38090 Fragaria vesca HOM05D005299 ORTHO05D006621 1.8e-140 503.1 346 69.9
MD09G1154100 Malus domestica HOM05D005299 ORTHO05D006621 3.0e-140 502.3 347 69.2
Gohir.A05G378300 Gossypium hirsutum HOM05D005299 ORTHO05D006621 1.5e-139 500.0 348 70.1
FAN02G4296 Fragaria x ananassa HOM05D005299 ORTHO05D006621 1.9e-139 499.6 346 69.9
Potri.002G168500 Populus trichocarpa HOM05D005299 ORTHO05D006621 1.9e-139 499.6 347 69.7
Gorai.012G042000 Gossypium raimondii HOM05D005299 ORTHO05D006621 1.3e-138 496.9 348 69.5
Atru.chr11.1755 Acer truncatum HOM05D005299 ORTHO05D006621 6.3e-138 494.6 347 69.5
Duzib187G1515 Durio zibethinus HOM05D005299 ORTHO05D006621 1.1e-137 493.8 347 68.9
Gohir.D04G037200 Gossypium hirsutum HOM05D005299 ORTHO05D006621 1.1e-137 493.8 348 69.0
Manes.01G128400 Manihot esculenta HOM05D005299 ORTHO05D006621 1.1e-137 493.8 345 68.7
Cpa.g.sc50.76 Carica papaya HOM05D005299 ORTHO05D006621 6.9e-137 491.1 347 67.1
Sabra02G0143400 Salix brachista HOM05D005299 ORTHO05D006621 4.5e-136 488.4 347 68.0
Hma1.2p1_0036F.1_g023590 Hydrangea macrophylla HOM05D005299 ORTHO05D006621 5.0e-135 485.0 350 66.3
CsaV3_6G015800 Cucumis sativus L. HOM05D005299 ORTHO05D006621 9.3e-134 480.7 340 67.4
ClCG02G018370 Citrullus lanatus HOM05D005299 ORTHO05D006621 1.6e-133 479.9 345 65.8
MELO3C019690.2 Cucumis melo HOM05D005299 ORTHO05D006621 1.6e-133 479.9 346 65.9
Phvul.008G190800 Phaseolus vulgaris HOM05D005299 ORTHO05D006621 7.9e-133 477.6 351 65.0
Glyma.14G027500 Glycine max HOM05D005299 ORTHO05D006621 1.0e-132 477.2 351 63.8
Dinv32183 Davidia involucrata HOM05D005299 ORTHO05D006621 1.4e-132 476.9 301 75.4
Eucgr.K01197 Eucalyptus grandis HOM05D005299 ORTHO05D006621 1.9e-131 473.0 349 65.3
Sed0016784 Sechium edule HOM05D005299 ORTHO05D006621 2.2e-130 469.5 346 65.9
PGR142G4033 Punica granatum HOM05D005299 ORTHO05D006621 3.7e-130 468.8 347 64.8
GSVIVG01000796001 Vitis vinifera HOM05D005299 ORTHO05D006621 6.3e-130 468.0 315 69.8
Rhsim06G0118500 Rhododendron simsii HOM05D005299 ORTHO05D006621 1.1e-129 467.2 348 64.7
LjContig00310g0013825 Lotus japonicus HOM05D005299 ORTHO05D006621 1.4e-129 466.8 347 62.5
CANSAT64G0352 Cannabis sativa HOM05D005299 ORTHO05D006621 2.4e-129 466.1 349 64.5
Gohir.A05G378200 Gossypium hirsutum HOM05D005299 ORTHO05D006621 3.1e-129 465.7 348 65.5
VMungo0647G0660 Vigna mungo HOM05D005299 ORTHO05D006621 2.0e-128 463.0 345 62.6
Gorai.012G042100 Gossypium raimondii HOM05D005299 ORTHO05D006621 3.4e-128 462.2 348 64.7
arahy.Tifrunner.gnm1.ann1.W6YWPQ Arachis hypogaea HOM05D005299 ORTHO05D006621 5.9e-128 461.5 364 60.7
Lj1P624T16 Lonicera japonica HOM05D005299 ORTHO05D006621 1.0e-127 460.7 334 67.4
DCAR_009793 Daucus carota HOM05D005299 ORTHO05D006621 1.3e-127 460.3 348 63.5
arahy.Tifrunner.gnm1.ann1.L8S1IT Arachis hypogaea HOM05D005299 ORTHO05D006621 2.9e-127 459.1 364 61.0
Lalb_Chr04g0248721 Lupinus albus HOM05D005299 ORTHO05D006621 1.4e-126 456.8 363 60.3
MBI07_g30205_MAGBIO Magnolia biondii HOM05D005299 ORTHO05D006621 4.2e-126 455.3 339 63.4
Nitab4.5_0001402g0040 Nicotiana tabacum HOM05D005299 ORTHO05D006621 5.5e-126 454.9 336 62.8
Medtr5g091790 Medicago truncatula HOM05D005299 ORTHO05D006621 7.2e-126 454.5 295 70.5
Nitab4.5_0001675g0010 Nicotiana tabacum HOM05D005299 ORTHO05D006621 7.2e-126 454.5 339 63.4
TPR.G12682 Trifolium pratense HOM05D005299 ORTHO05D006621 2.7e-125 452.6 358 63.1
Aqoxy4G00177 Aquilegia oxysepala HOM05D005299 ORTHO05D006621 6.1e-125 451.4 346 63.9
CAN.G585.55 Capsicum annuum HOM05D005299 ORTHO05D006621 3.9e-124 448.7 348 62.4
Peaxi162Scf00154g00511 Petunia axillaris HOM05D005299 ORTHO05D006621 5.1e-124 448.4 308 66.9
Cc05_g09280 Coffea canephora HOM05D005299 ORTHO05D006621 6.7e-124 448.0 349 61.6
MSTRG.15054 Avicennia marina HOM05D005299 ORTHO05D006621 1.1e-123 447.2 346 61.8
PGSC0003DMG400017296 Solanum tuberosum HOM05D005299 ORTHO05D006621 1.5e-123 446.8 321 65.1
Ca_06288_v3 Cicer arietinum L. HOM05D005299 ORTHO05D006621 2.6e-123 446.0 312 65.7
SGA_v2.0_scaffold130G34359 Striga asiatica HOM05D005299 ORTHO05D006621 2.6e-123 446.0 322 63.4
TAR624G0522 Trochodendron aralioides HOM05D005299 ORTHO05D006621 2.6e-123 446.0 349 62.8
Oeu006146.1 Olea europaea HOM05D005299 ORTHO05D006621 7.4e-123 444.5 347 61.4
Nn3g20966 Nelumbo nucifera HOM05D005299 ORTHO05D006621 4.8e-122 441.8 340 62.9
Sopen07g029300 Solanum pennellii HOM05D005299 ORTHO05D006621 8.2e-122 441.0 339 61.9
Solyc07g055940.3 Solanum lycopersicum HOM05D005299 ORTHO05D006621 2.4e-121 439.5 339 61.7
Migut.M00515 Erythranthe guttata HOM05D005299 ORTHO05D006621 1.2e-120 437.2 330 62.7
CAN.G1191.5 Capsicum annuum HOM05D005299 ORTHO05D006621 1.7e-119 433.3 327 61.5
Psat2g014680 Pisum sativum HOM05D005299 ORTHO05D006621 3.8e-119 432.2 336 59.8
Glyma.02G287500 Glycine max HOM05D005299 ORTHO05D006621 8.5e-119 431.0 353 60.1
COL.COLO4_33735 Corchorus olitorius HOM05D005299 ORTHO05D006621 1.4e-118 430.3 304 67.4
SalBow8G4073 Salvia bowleyana HOM05D005299 ORTHO05D006621 4.2e-118 428.7 333 58.9
PSO675G1896 Papaver somniferum HOM05D005299 ORTHO05D006621 3.6e-117 425.6 335 61.5
ATR0737G056 Amborella trichopoda HOM05D005299 ORTHO05D006621 1.5e-115 420.2 340 57.9
THA.LOC104803188 Tarenaya hassleriana HOM05D005299 ORTHO05D006621 1.5e-115 420.2 346 59.5
PSO541G3070 Papaver somniferum HOM05D005299 ORTHO05D006621 2.6e-115 419.5 335 59.7
Lsat_1_v5_gn_8_32101 Lactuca sativa HOM05D005299 ORTHO05D006621 1.3e-114 417.2 325 60.3
Sc04g0008260 Simmondsia chinensis HOM05D005299 ORTHO05D006621 2.8e-114 416.0 333 59.5
HanXRQChr12g0369651 Helianthus annuus HOM05D005299 ORTHO05D006621 1.9e-110 403.3 345 54.5
AT3G58800 Arabidopsis thaliana HOM05D005299 ORTHO05D006621 2.1e-109 399.8 348 57.8
Carub.0005s2558 Capsella rubella HOM05D005299 ORTHO05D006621 1.0e-108 397.5 348 56.9
HPP92_007777 Vanilla planifolia HOM05D005299 ORTHO05D006621 1.4e-108 397.1 293 63.1
CARHR169190 Cardamine hirsuta HOM05D005299 ORTHO05D006621 2.6e-107 392.9 347 56.2
Sp5g04040 Schrenkiella parvula HOM05D005299 ORTHO05D006621 9.7e-107 391.0 349 55.9
Aa31LG10G13380 Aethionema arabicum HOM05D005299 ORTHO05D006621 8.2e-106 387.9 286 63.6
AL5G40590 Arabidopsis lyrata HOM05D005299 ORTHO05D006621 1.8e-105 386.7 348 56.3
SEGI_33032 Sequoiadendron giganteum HOM05D005299 ORTHO05D006621 1.6e-104 383.6 338 53.3
EL10Ac6g14080 Beta vulgaris HOM05D005299 ORTHO05D006621 3.8e-103 379.0 341 55.4
BolC8t51012H Brassica oleracea HOM05D005299 ORTHO05D006621 3.8e-103 379.0 345 54.8
C08p34130 Brassica napus HOM05D005299 ORTHO05D006621 6.5e-103 378.3 345 54.5
BcaC07g40297 Brassica carinata HOM05D005299 ORTHO05D006621 8.5e-103 377.9 345 54.5
unitig_747.g21613 Utricularia gibba HOM05D005299 ORTHO05D006621 4.2e-102 375.6 324 52.5
Ah.01g004630 Amaranthus hybridus HOM05D005299 ORTHO05D006621 5.5e-102 375.2 351 53.8
Thhalv10006079m.g Eutrema salsugineum HOM05D005299 ORTHO05D006621 5.5e-102 375.2 346 55.2
AUR62028463 Chenopodium quinoa HOM05D005299 ORTHO05D006621 1.2e-101 374.0 349 52.7
BcaC07g40228 Brassica carinata HOM05D005299 ORTHO05D006621 2.1e-101 373.2 347 54.5
Hund04227 Selenicereus undatus HOM05D005299 ORTHO05D006621 2.1e-101 373.2 337 54.3
Nitab4.5_0013539g0010 Nicotiana tabacum HOM05D005299 ORTHO05D006621 4.7e-101 372.1 334 56.6
AUR62042721 Chenopodium quinoa HOM05D005299 ORTHO05D006621 8.0e-101 371.3 352 51.4
A09p51350 Brassica napus HOM05D005299 ORTHO05D006621 8.8e-100 367.9 346 53.8
BraA09t40576Z Brassica rapa HOM05D005299 ORTHO05D006621 8.8e-100 367.9 346 53.8
Peaxi162Scf00035g00313 Petunia axillaris HOM05D005299 ORTHO05D006621 8.8e-100 367.9 298 58.4
SHI07041 Sapria himalayana HOM05D005299 ORTHO05D006621 4.8e-98 362.1 314 53.5
CSS0024030 Camellia sinensis var. sinensis HOM05D005299 ORTHO05D006621 1.1e-97 360.9 338 55.6
ECA233G0136 Erigeron canadensis HOM05D005299 ORTHO05D001423 3.4e-91 339.3 250 61.6
HPP92_007800 Vanilla planifolia HOM05D005299 ORTHO05D006621 3.6e-85 319.3 269 59.1
Nitab4.5_0002027g0150 Nicotiana tabacum HOM05D005299 ORTHO05D006621 2.0e-83 313.5 219 65.8
Os01g0748200 Oryza sativa ssp. japonica HOM05D005299 ORTHO05D006621 8.9e-76 288.1 341 42.8
Zm00001eb153130 Zea mays HOM05D005299 ORTHO05D006621 8.9e-76 288.1 286 46.5
MD17G1140700 Malus domestica HOM05D005299 ORTHO05D006621 2.9e-74 283.1 313 49.5
Zm00001eb204700 Zea mays HOM05D005299 ORTHO05D006621 2.4e-73 280.0 301 45.8
Os02g0230200 Oryza sativa ssp. japonica HOM05D005299 ORTHO05D006621 2.7e-72 276.6 296 46.6
SMO143G0231 Selaginella moellendorffii HOM05D005299 ORTHO05D006621 6.0e-72 275.4 286 44.8
Mapoly0101s0004 Marchantia polymorpha HOM05D005299 ORTHO05D006621 1.2e-69 267.7 294 43.2
Pp3c3_20150 Physcomitrium patens HOM05D005299 ORTHO05D006621 7.5e-67 258.5 336 40.5
HanXRQChr12g0369671 Helianthus annuus HOM05D005299 ORTHO05D006621 1.9e-62 243.8 190 55.8
Gohir.D04G037301 Gossypium hirsutum HOM05D005299 ORTHO05D006621 8.7e-55 218.4 153 66.7
AagrBONN_evm.TU.Sc2ySwM_344.3512 Anthoceros agrestis HOM05D005299 ORTHO05D006621 5.8e-51 205.7 294 36.4
AagrBONN_evm.TU.Sc2ySwM_117.611 Anthoceros agrestis HOM05D005299 ORTHO05D006621 4.2e-49 199.5 300 36.3
AagrBONN_evm.TU.Sc2ySwM_344.2434 Anthoceros agrestis HOM05D005299 ORTHO05D006621 2.1e-48 197.2 303 36.6
AagrBONN_evm.TU.Sc2ySwM_362.595 Anthoceros agrestis HOM05D005299 ORTHO05D006621 7.8e-48 195.3 311 36.0
Pp3c1_7220 Physcomitrium patens HOM05D005299 ORTHO05D006621 7.3e-46 188.7 282 34.8
AagrBONN_evm.TU.Sc2ySwM_228.4947 Anthoceros agrestis HOM05D005299 ORTHO05D006621 2.4e-44 183.7 291 35.7
AagrBONN_evm.TU.Sc2ySwM_228.4866 Anthoceros agrestis HOM05D005299 ORTHO05D006621 5.3e-44 182.6 316 34.8
AagrBONN_evm.TU.Sc2ySwM_344.1994 Anthoceros agrestis HOM05D005299 ORTHO05D006621 9.9e-43 178.3 295 33.2
SMO356G0525 Selaginella moellendorffii HOM05D005299 ORTHO05D006621 2.2e-42 177.2 284 34.5
AagrBONN_evm.TU.Sc2ySwM_228.2643 Anthoceros agrestis HOM05D005299 ORTHO05D006621 8.4e-42 175.3 296 35.5
SMO304G0008 Selaginella moellendorffii HOM05D005299 ORTHO05D006621 5.4e-41 172.6 293 33.8
AagrBONN_evm.TU.Sc2ySwM_228.5465 Anthoceros agrestis HOM05D005299 ORTHO05D006621 1.2e-40 171.4 306 33.3
AagrBONN_evm.TU.Sc2ySwM_362.1230 Anthoceros agrestis HOM05D005299 ORTHO05D006621 2.7e-40 170.2 248 37.5
AagrBONN_evm.TU.Sc2ySwM_117.3041__3042 Anthoceros agrestis HOM05D005299 ORTHO05D006621 3.0e-39 166.8 347 31.1
AagrBONN_evm.TU.Sc2ySwM_368.2564 Anthoceros agrestis HOM05D005299 ORTHO05D006621 3.9e-39 166.4 307 30.9
AagrBONN_evm.TU.Sc2ySwM_362.647 Anthoceros agrestis HOM05D005299 ORTHO05D006621 1.1e-38 164.9 341 30.5
AagrBONN_evm.TU.Sc2ySwM_362.723 Anthoceros agrestis HOM05D005299 ORTHO05D006621 3.3e-38 163.3 257 35.0
AagrBONN_evm.TU.Sc2ySwM_344.988 Anthoceros agrestis HOM05D005299 ORTHO05D006621 2.0e-35 154.1 291 32.6
AagrBONN_evm.TU.Sc2ySwM_368.682 Anthoceros agrestis HOM05D005299 ORTHO05D006621 1.3e-34 151.4 291 32.3
Cre16.g692650 Chlamydomonas reinhardtii HOM05D005299 ORTHO05D006621 1.1e-33 148.3 321 31.2
AagrBONN_evm.TU.Sc2ySwM_368.683 Anthoceros agrestis HOM05D005299 ORTHO05D006621 2.1e-32 144.1 291 31.3
AagrBONN_evm.TU.Sc2ySwM_368.684 Anthoceros agrestis HOM05D005299 ORTHO05D006621 1.4e-25 121.3 276 30.1
MCO16G314 Micromonas commoda HOM05D005299 ORTHO05D006621 2.3e-23 114.0 280 28.2
CBR_g37320 Chara braunii HOM05D000019 ORTHO05D000002 8.2e-13 79.0 63 52.4
ECA233G3003 Erigeron canadensis HOM05D000038 ORTHO05D000423 2.4e-12 77.4 96 40.6
Cre04.g231810 Chlamydomonas reinhardtii HOM05D005299 ORTHO05D006621 3.1e-12 77.0 74 44.6
HanXRQChr17g0539561 Helianthus annuus HOM05D005299 ORTHO05D006621 3.4e-11 73.6 41 65.9
Cre04.g231712 Chlamydomonas reinhardtii HOM05D005299 ORTHO05D006621 2.9e-10 70.5 152 31.6


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