Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p042310 Quercus lobata HOM05D008673 ORTHO05D010863 1.8e-75 285.8 145 100.0
Cfa023576 Carpinus fangiana HOM05D008673 ORTHO05D010863 2.4e-43 179.1 145 66.9
Haze_13428 Corylus avellana HOM05D008673 ORTHO05D010863 3.6e-39 165.2 145 63.4
Hma1.2p1_0178F.1_g078530 Hydrangea macrophylla HOM05D008673 ORTHO05D010863 4.0e-38 161.8 146 60.3
MD17G1264400 Malus domestica HOM05D008673 ORTHO05D010863 3.5e-34 148.7 156 59.0
Atru.chr6.2763 Acer truncatum HOM05D008673 ORTHO05D010863 7.9e-34 147.5 145 57.9
Dinv11960 Davidia involucrata HOM05D008673 ORTHO05D010863 4.3e-32 141.7 129 58.9
CSS0031774 Camellia sinensis var. sinensis HOM05D008673 ORTHO05D010863 1.3e-31 140.2 150 55.3
Ciclev10017107m.g Citrus clementina HOM05D008673 ORTHO05D010863 2.0e-29 132.9 143 54.5
Gohir.A05G376500 Gossypium hirsutum HOM05D008673 ORTHO05D010863 4.5e-29 131.7 151 52.3
Thecc.01G153500 Theobroma cacao HOM05D008673 ORTHO05D010863 4.5e-29 131.7 151 52.3
Rhsim06G0129800 Rhododendron simsii HOM05D008673 ORTHO05D010863 7.6e-29 131.0 151 53.6
Gohir.1Z049426 Gossypium hirsutum HOM05D008673 ORTHO05D010863 2.9e-28 129.0 151 51.7
Gohir.1Z049527 Gossypium hirsutum HOM05D008673 ORTHO05D010863 2.9e-28 129.0 151 51.7
COL.COLO4_33611 Corchorus olitorius HOM05D008673 ORTHO05D010863 6.4e-28 127.9 154 50.0
Cpa.g.c43414 Carica papaya HOM05D008673 ORTHO05D010863 1.9e-27 126.3 148 53.4
Peaxi162Scf00469g00533 Petunia axillaris HOM05D008673 ORTHO05D010863 2.3e-25 119.4 144 49.3
CANSAT64G3005 Cannabis sativa HOM05D008673 ORTHO05D010863 3.0e-25 119.0 145 48.3
PSO170G4741 Papaver somniferum HOM05D008673 ORTHO05D010863 6.7e-25 117.9 149 49.7
PGSC0003DMG400020413 Solanum tuberosum HOM05D008673 ORTHO05D010863 2.5e-24 115.9 156 46.8
PSO782G1671 Papaver somniferum HOM05D008673 ORTHO05D010863 5.6e-24 114.8 150 47.3
Nn3g21118 Nelumbo nucifera HOM05D008673 ORTHO05D010863 1.3e-23 113.6 145 47.6
Solyc07g055250.3 Solanum lycopersicum HOM05D008673 ORTHO05D010863 1.3e-23 113.6 156 46.8
Sopen07g026970 Solanum pennellii HOM05D008673 ORTHO05D010863 1.3e-23 113.6 156 47.4
Migut.M00276 Erythranthe guttata HOM05D008673 ORTHO05D010863 1.4e-22 110.2 162 45.7
Aqoxy4G00256 Aquilegia oxysepala HOM05D008673 ORTHO05D010863 2.0e-21 106.3 138 47.1
MBI06_g36541_MAGBIO Magnolia biondii HOM05D008673 ORTHO05D010863 4.5e-21 105.1 147 46.3
TAR626G0445 Trochodendron aralioides HOM05D008673 ORTHO05D010863 1.7e-20 103.2 162 41.4
TAR686G0002 Trochodendron aralioides HOM05D008673 ORTHO05D010863 7.1e-19 97.8 167 40.7
Prupe.3G113700 Prunus persica HOM05D008673 ORTHO05D010863 9.3e-19 97.4 152 45.4
Nn1g04505 Nelumbo nucifera HOM05D008673 ORTHO05D010863 3.5e-18 95.5 147 45.6
GSVIVG01020747001 Vitis vinifera HOM05D008673 ORTHO05D010863 7.4e-16 87.8 77 61.0
Nitab4.5_0007923g0050 Nicotiana tabacum HOM05D008673 ORTHO05D010863 8.2e-15 84.3 136 41.9
SEGI_15633 Sequoiadendron giganteum HOM05D008673 ORTHO05D010863 1.2e-13 80.5 163 35.0
Nitab4.5_0000249g0110 Nicotiana tabacum HOM05D008673 ORTHO05D010863 3.4e-13 79.0 134 42.5
SMO361G0282 Selaginella moellendorffii HOM05D008673 ORTHO05D010863 4.2e-11 72.0 142 35.9
SMO361G0580 Selaginella moellendorffii HOM05D008673 ORTHO05D010863 2.1e-10 69.7 142 35.2
Pp3c14_19400 Physcomitrium patens HOM05D008673 ORTHO05D010863 1.4e-09 67.0 141 34.8
Pp3c1_33030 Physcomitrium patens HOM05D008673 ORTHO05D010863 1.5e-08 63.5 148 28.4
AagrBONN_evm.TU.Sc2ySwM_344.5531 Anthoceros agrestis HOM05D008673 ORTHO05D010863 4.3e-08 62.0 151 29.8
Pp3c2_4650 Physcomitrium patens HOM05D008673 ORTHO05D010863 2.2e-07 59.7 137 32.8
Mapoly0040s0119 Marchantia polymorpha HOM05D008673 ORTHO05D010863 2.4e-06 56.2 153 30.7
Gorai.012G044500 Gossypium raimondii HOM05D008673 ORTHO05D010863 3.1e-06 55.8 88 45.5


User provided reference genes

Program Settings