Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p042110 Quercus lobata HOM05D008138 ORTHO05D010043 3.8e-91 338.2 174 100.0
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 2.5e-42 176.0 130 70.8
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 1.2e-41 173.7 114 78.1
QL10p055376 Quercus lobata HOM05D008138 ORTHO05D010043 5.2e-40 168.3 116 75.9
QL10p055293 Quercus lobata HOM05D008138 ORTHO05D010043 9.8e-31 137.5 91 76.9
QL10p055198 Quercus lobata HOM05D008138 ORTHO05D010043 5.9e-20 101.7 107 50.5
QL10p055147 Quercus lobata HOM05D008138 ORTHO05D010043 2.5e-18 96.3 102 46.1
QL10p055072 Quercus lobata HOM05D008138 ORTHO05D010043 3.3e-18 95.9 105 49.5
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 7.3e-18 94.7 87 50.6
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 2.8e-17 92.8 114 44.7
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 4.0e-16 89.0 87 47.1
QL10p055607 Quercus lobata HOM05D008138 ORTHO05D010043 8.9e-16 87.8 94 46.8
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 7.5e-15 84.7 78 47.4
QL93p1902_0029 Quercus lobata HOM05D008138 ORTHO05D010043 7.5e-15 84.7 87 51.7
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 7.5e-15 84.7 120 35.0
QL10p055255 Quercus lobata HOM05D008138 ORTHO05D010043 1.7e-14 83.6 85 47.1
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 3.7e-14 82.4 95 43.2
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 3.7e-14 82.4 78 50.0
QL10p054634 Quercus lobata HOM05D008138 ORTHO05D010043 8.3e-14 81.3 97 42.3
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 1.4e-13 80.5 95 45.3
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 4.1e-13 79.0 95 40.0
Duzib151G0273 Durio zibethinus HOM05D008138 ORTHO05D010043 1.6e-12 77.0 81 44.4
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 4.6e-12 75.5 86 39.5
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 1.0e-11 74.3 69 50.7
Rhsim09G0118100 Rhododendron simsii HOM05D008138 ORTHO05D010043 1.1e-10 70.9 142 28.9
Dinv16583 Davidia involucrata HOM05D008138 ORTHO05D010043 3.3e-10 69.3 80 42.5
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 3.3e-10 69.3 85 37.6
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 3.3e-10 69.3 88 37.5
Rhsim09G0118800 Rhododendron simsii HOM05D008138 ORTHO05D010043 7.3e-10 68.2 102 36.3
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 1.2e-09 67.4 71 40.8
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 1.2e-09 67.4 87 40.2
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 2.1e-09 66.6 87 35.6
Sabra13G0105400 Salix brachista HOM05D008138 ORTHO05D010043 2.1e-09 66.6 86 37.2
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 3.6e-09 65.9 97 37.1
Ciclev10022667m.g Citrus clementina HOM05D017113 ORTHO05D019028 1.4e-08 63.9 106 38.7
Ciclev10022666m.g Citrus clementina HOM05D017113 ORTHO05D019028 5.2e-08 62.0 106 38.7
Dinv33884 Davidia involucrata HOM05D008138 ORTHO05D010043 5.2e-08 62.0 78 38.5
Ciclev10022611m.g Citrus clementina HOM05D017113 ORTHO05D019028 8.9e-08 61.2 111 36.0
Ciclev10022615m.g Citrus clementina HOM05D017113 ORTHO05D019028 8.9e-08 61.2 111 35.1
Eucgr.B03099 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.2e-07 60.8 84 38.1
Gorai.013G098900 Gossypium raimondii HOM05D033109 ORTHO05D010043 2.0e-07 60.1 65 46.2
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.6e-07 59.7 116 30.2
ClCG01G007380 Citrullus lanatus HOM05D022360 ORTHO05D010043 2.6e-07 59.7 104 36.5
CSS0029791 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.4e-07 59.3 116 30.2
QL10p055313 Quercus lobata HOM05D008138 ORTHO05D010043 3.4e-07 59.3 94 42.6
MSTRG.19633 Avicennia marina HOM05D008138 ORTHO05D010043 5.8e-07 58.5 86 37.2
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.8e-07 58.5 90 32.2
Haze_14354 Corylus avellana HOM05D008138 ORTHO05D010043 5.8e-07 58.5 89 36.0
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 5.8e-07 58.5 96 38.5
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 7.5e-07 58.2 88 34.1
Ciclev10033630m.g Citrus clementina HOM05D008138 ORTHO05D010043 9.8e-07 57.8 73 37.0
CsaV3_5G018850 Cucumis sativus L. HOM05D022360 ORTHO05D034989 1.3e-06 57.4 97 36.1
Gohir.A13G091345 Gossypium hirsutum HOM05D033109 ORTHO05D010043 1.3e-06 57.4 66 43.9
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.7e-06 57.0 90 31.1
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.7e-06 57.0 90 31.1
Cfa007720 Carpinus fangiana HOM05D008138 ORTHO05D010043 1.7e-06 57.0 95 34.7
Prupe.1G297700 Prunus persica HOM05D008138 ORTHO05D010043 1.7e-06 57.0 88 37.5
Atru.chr4.1346 Acer truncatum HOM05D058995 ORTHO05D010043 2.2e-06 56.6 92 38.0
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.2e-06 56.6 90 33.3
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 2.2e-06 56.6 88 33.0
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.9e-06 56.2 91 33.0
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.9e-06 56.2 90 31.1
CSS0022599 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.7e-06 55.8 86 32.6
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 4.9e-06 55.5 88 33.0
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.4e-06 55.1 89 30.3
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 8.3e-06 54.7 90 31.1


User provided reference genes

Program Settings