Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 5.9e-117 424.5 255 100.0
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 4.7e-58 228.8 229 68.1
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 7.5e-56 221.5 223 56.1
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 3.3e-51 206.1 231 53.2
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 1.6e-50 203.8 233 56.7
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 2.3e-49 199.9 229 55.5
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 4.1e-46 189.1 231 58.4
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 1.6e-45 187.2 233 54.5
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 6.0e-45 185.3 241 49.0
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 1.5e-43 180.6 241 52.3
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 5.6e-43 178.7 244 49.6
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 7.3e-43 178.3 252 48.0
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 2.1e-42 176.8 230 56.5
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 3.1e-41 172.9 243 49.0
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 4.0e-41 172.6 225 50.2
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 1.2e-40 171.0 234 57.3
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 3.8e-39 166.0 223 46.6
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 5.4e-38 162.2 225 47.6
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 7.1e-38 161.8 234 58.1
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 2.3e-36 156.8 236 51.7
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 1.5e-35 154.1 251 47.4
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 1.3e-34 151.0 229 50.2
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 2.4e-33 146.7 235 50.6
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 5.3e-33 145.6 234 50.9
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 9.0e-33 144.8 236 47.9
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 1.5e-32 144.1 235 48.9
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 9.9e-32 141.4 234 50.0
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 2.9e-31 139.8 258 48.8
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 1.4e-30 137.5 224 50.0
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 1.9e-30 137.1 245 46.5
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 1.9e-30 137.1 228 57.5
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 1.6e-29 134.0 220 49.1
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 2.7e-29 133.3 224 42.0
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 1.7e-28 130.6 239 51.0
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 3.9e-28 129.4 251 44.6
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 8.7e-28 128.3 216 48.6
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 3.3e-27 126.3 232 47.0
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 3.3e-27 126.3 235 49.8
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 7.3e-27 125.2 208 49.5
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 9.6e-27 124.8 232 50.0
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 1.1e-25 121.3 241 40.2
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 1.4e-25 120.9 244 38.5
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 1.8e-25 120.6 243 41.6
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 2.4e-25 120.2 250 39.6
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 4.0e-25 119.4 231 39.4
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 5.3e-25 119.0 225 49.8
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 9.0e-25 118.2 237 40.5
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 9.0e-25 118.2 249 36.9
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 2.0e-24 117.1 242 43.0
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 3.4e-24 116.3 233 46.8
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 5.8e-24 115.5 242 40.5
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 5.8e-24 115.5 217 40.6
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 1.3e-23 114.4 144 48.6
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 6.4e-23 112.1 254 46.9
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 6.4e-23 112.1 202 52.5
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 8.4e-23 111.7 219 48.9
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 5.4e-22 109.0 223 42.6
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 5.4e-22 109.0 228 44.7
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 5.4e-22 109.0 239 49.0
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 7.1e-22 108.6 242 37.2
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 2.1e-21 107.1 226 37.6
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 2.1e-21 107.1 226 37.6
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 2.1e-21 107.1 226 37.6
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 2.7e-21 106.7 270 38.5
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 2.7e-21 106.7 197 41.6
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 3.5e-21 106.3 240 37.1
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 3.5e-21 106.3 226 37.6
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 4.6e-21 105.9 233 46.4
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 4.6e-21 105.9 226 37.6
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 4.6e-21 105.9 224 42.0
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 4.6e-21 105.9 248 39.1
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 6.0e-21 105.5 220 47.7
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 7.9e-21 105.1 227 40.1
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 1.8e-20 104.0 231 37.2
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 3.0e-20 103.2 233 45.9
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 8.7e-20 101.7 191 51.8
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 1.3e-18 97.8 246 45.5
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 3.7e-18 96.3 236 40.7
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 8.1e-18 95.1 119 52.9
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 1.8e-17 94.0 148 45.9
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 2.4e-17 93.6 226 45.1
Hund07856 Selenicereus undatus HOM05D007603 ORTHO05D009604 4.5e-16 89.4 104 51.0
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 1.3e-15 87.8 164 51.8
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 6.5e-15 85.5 186 47.3
AUR62036075 Chenopodium quinoa HOM05D007603 ORTHO05D009604 6.5e-15 85.5 122 50.8
AUR62043430 Chenopodium quinoa HOM05D007603 ORTHO05D009604 1.1e-14 84.7 237 50.2
FAN09G3062 Fragaria x ananassa HOM05D007603 ORTHO05D009604 1.9e-14 84.0 135 43.0
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 2.1e-13 80.5 229 33.2
BolC8t50594H Brassica oleracea HOM05D007603 ORTHO05D009604 6.0e-13 79.0 226 42.9
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 2.3e-12 77.0 227 34.8
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 5.1e-12 75.9 145 44.8
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 3.3e-11 73.2 247 31.6
Rhsim06G0135700 Rhododendron simsii HOM05D007603 ORTHO05D009604 2.5e-06 57.0 82 46.3
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 3.2e-06 56.6 224 32.6


User provided reference genes

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