Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 1.3e-233 812.8 431 100.0
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 7.0e-139 498.0 455 65.1
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 4.0e-126 455.7 436 62.6
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 5.8e-101 372.1 439 55.4
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 5.8e-101 372.1 447 54.1
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 6.0e-98 362.1 435 54.3
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 1.1e-94 351.3 474 50.0
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 1.3e-89 334.3 469 48.2
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 2.3e-89 333.6 442 50.7
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 5.1e-89 332.4 472 49.4
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 8.2e-87 325.1 446 48.9
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 8.2e-87 325.1 441 50.3
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 6.9e-86 322.0 443 48.8
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 1.5e-85 320.9 456 49.1
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 2.6e-85 320.1 435 48.3
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 3.4e-85 319.7 471 48.4
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 1.0e-84 318.2 443 47.4
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 2.9e-84 316.6 440 50.5
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 2.7e-82 310.1 459 47.3
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 4.6e-82 309.3 487 45.0
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 6.1e-82 308.9 442 47.1
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 2.3e-81 307.0 459 46.8
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 3.9e-81 306.2 439 49.4
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 6.7e-81 305.4 495 45.5
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 1.1e-80 304.7 442 47.7
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 4.3e-80 302.8 439 49.7
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 9.7e-80 301.6 439 49.7
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 2.8e-79 300.1 475 44.6
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 4.8e-79 299.3 439 49.4
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.4e-78 297.7 439 49.2
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 1.8e-78 297.4 459 46.4
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 2.4e-78 297.0 443 47.2
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 9.1e-78 295.0 450 47.3
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 2.9e-76 290.0 506 45.1
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 7.2e-75 285.4 435 46.4
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 4.4e-72 276.2 435 45.3
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 9.7e-72 275.0 439 44.6
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 3.1e-70 270.0 172 80.8
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 4.5e-69 266.2 435 45.3
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 2.1e-66 257.3 436 46.1
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 2.1e-66 257.3 434 42.4
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 3.6e-66 256.5 436 42.9
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 1.0e-65 255.0 449 43.4
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 1.8e-65 254.2 434 42.4
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 5.2e-65 252.7 205 65.9
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 1.5e-64 251.1 485 40.6
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 1.7e-63 247.7 480 43.5
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 2.2e-63 247.3 442 43.7
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 4.8e-63 246.1 436 43.3
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 1.6e-61 241.1 461 41.0
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 5.9e-61 239.2 450 42.9
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 5.9e-61 239.2 452 40.9
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 2.9e-60 236.9 446 43.3
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 5.0e-60 236.1 439 41.9
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 5.0e-60 236.1 439 41.9
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 1.0e-57 228.4 442 40.0
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 4.0e-57 226.5 443 41.8
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 8.3e-55 218.8 458 41.5
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 1.4e-54 218.0 443 39.3
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 1.4e-54 218.0 449 38.3
Haze_13262 Corylus avellana HOM05D006668 ORTHO05D008252 2.0e-53 214.2 227 59.9
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 7.7e-53 212.2 439 36.7
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 3.8e-52 209.9 455 39.8
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 1.1e-51 208.4 438 38.8
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 5.5e-51 206.1 465 37.0
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 1.6e-50 204.5 458 38.9
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 3.6e-50 203.4 432 36.8
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 6.1e-50 202.6 457 36.3
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 1.0e-49 201.8 469 36.7
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 1.8e-49 201.1 438 37.9
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 6.8e-49 199.1 438 37.7
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 1.5e-48 198.0 450 37.3
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 4.4e-48 196.4 443 40.4
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 6.3e-47 192.6 422 36.0
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 1.1e-46 191.8 435 36.8
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 1.1e-46 191.8 456 39.3
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 1.8e-46 191.0 438 37.0
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 2.4e-46 190.7 438 37.4
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 2.7e-45 187.2 435 36.1
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 5.9e-45 186.0 341 41.1
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 5.9e-45 186.0 328 40.9
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 1.7e-44 184.5 439 36.7
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 1.7e-44 184.5 439 36.7
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 8.6e-44 182.2 442 39.1
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 1.5e-43 181.4 397 40.3
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 4.2e-43 179.9 442 37.3
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 1.2e-42 178.3 446 35.9
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 6.1e-42 176.0 454 35.9
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 8.9e-41 172.2 437 34.8
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 8.9e-41 172.2 459 35.9
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 5.7e-40 169.5 431 33.9
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 6.3e-39 166.0 431 34.8
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 8.3e-39 165.6 432 35.2
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 3.2e-38 163.7 459 34.9
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 3.3e-35 153.7 513 33.9
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 1.6e-34 151.4 331 38.4
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 2.1e-34 151.0 486 33.3
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 1.4e-30 138.3 280 41.4
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 9.2e-30 135.6 136 61.8
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 2.7e-29 134.0 195 45.1
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.0e-28 132.1 133 61.7
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 1.0e-28 132.1 471 30.4
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 1.3e-28 131.7 403 33.7
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 3.7e-23 113.6 430 30.0
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 2.3e-20 104.4 205 36.1
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 2.3e-17 94.4 317 30.6
Sabra07G0109400 Salix brachista HOM05D006668 ORTHO05D008252 3.2e-14 84.0 75 57.3
CSS0027561 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 8.6e-12 75.9 251 34.7
BcaB07g30967 Brassica carinata HOM05D006668 ORTHO05D008252 3.3e-11 73.9 162 38.3
CSS0037366 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 4.3e-11 73.6 250 35.6
RcHm_v2.0_Chr7g0225321 Rosa chinensis HOM05D006668 ORTHO05D008252 7.3e-11 72.8 111 46.8
AUR62043432 Chenopodium quinoa HOM05D006668 ORTHO05D008252 1.2e-10 72.0 128 41.4
Ah.01g015540 Amaranthus hybridus HOM05D006668 ORTHO05D008252 4.0e-09 67.0 153 36.6
ATR0602G285 Amborella trichopoda HOM05D006668 ORTHO05D008252 4.9e-07 60.1 135 40.0
Actinidia11116 Actinidia chinensis HOM05D006668 ORTHO05D008252 7.1e-06 56.2 201 28.9


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