Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p040477 Quercus lobata HOM05D000735 ORTHO05D338042 7.7e-51 203.4 93 100.0
Cfa020251 Carpinus fangiana HOM05D000735 ORTHO05D000838 6.8e-15 84.0 109 45.9
QL08p008359 Quercus lobata HOM05D000735 ORTHO05D000838 2.6e-14 82.0 45 80.0
Ca_14779_v3 Cicer arietinum L. HOM05D000735 ORTHO05D000838 5.1e-10 67.8 104 37.5
Nitab4.5_0004445g0030 Nicotiana tabacum HOM05D000735 ORTHO05D000838 1.9e-09 65.9 45 62.2
Duzib213G1038 Durio zibethinus HOM05D000735 ORTHO05D000838 4.3e-09 64.7 45 57.8
Cfa020249 Carpinus fangiana HOM05D000735 ORTHO05D000838 5.6e-09 64.3 172 29.7
Peaxi162Scf04040g00005 Petunia axillaris HOM05D000735 ORTHO05D000838 1.6e-08 62.8 46 65.2
Haze_09765 Corylus avellana HOM05D000735 ORTHO05D000838 2.1e-08 62.4 172 29.1
CiPaw.11G197500 Carya illinoinensis HOM05D000735 ORTHO05D000838 6.2e-08 60.8 45 64.4
Nitab4.5_0006756g0060 Nicotiana tabacum HOM05D000735 ORTHO05D000838 8.1e-08 60.5 45 57.8
Gohir.A01G085600 Gossypium hirsutum HOM05D000735 ORTHO05D000838 1.8e-07 59.3 43 62.8
Gohir.D01G071900 Gossypium hirsutum HOM05D000735 ORTHO05D000838 1.8e-07 59.3 43 62.8
THA.LOC104817693 Tarenaya hassleriana HOM05D000735 ORTHO05D000838 1.8e-07 59.3 40 67.5
Gorai.002G094800 Gossypium raimondii HOM05D000735 ORTHO05D000838 2.4e-07 58.9 43 62.8
Manes.03G134700 Manihot esculenta HOM05D000735 ORTHO05D000838 2.4e-07 58.9 43 62.8
Atru.chr2.3585 Acer truncatum HOM05D000735 ORTHO05D000838 4.0e-07 58.2 89 39.3
CSS0010499 Camellia sinensis var. sinensis HOM05D000735 ORTHO05D000838 4.0e-07 58.2 45 57.8
RcHm_v2.0_Chr5g0056181 Rosa chinensis HOM05D000735 ORTHO05D000838 6.9e-07 57.4 87 35.6
AT5G55470 Arabidopsis thaliana HOM05D000735 ORTHO05D000838 9.0e-07 57.0 41 58.5
BcaB08g35903 Brassica carinata HOM05D000735 ORTHO05D000838 1.2e-06 56.6 76 40.8
Carub.0008s1581 Capsella rubella HOM05D000735 ORTHO05D000838 1.2e-06 56.6 43 53.5
Dinv22218 Davidia involucrata HOM05D000735 ORTHO05D000838 1.2e-06 56.6 45 57.8
Medtr3g055600 Medicago truncatula HOM05D000735 ORTHO05D000838 1.2e-06 56.6 89 41.6
PGSC0003DMG400034953 Solanum tuberosum HOM05D000735 ORTHO05D000838 1.5e-06 56.2 45 57.8
Actinidia05050 Actinidia chinensis HOM05D000735 ORTHO05D000838 2.0e-06 55.8 45 55.6
AL8G31000 Arabidopsis lyrata HOM05D000735 ORTHO05D000838 2.0e-06 55.8 41 56.1
Ciclev10008001m.g Citrus clementina HOM05D000735 ORTHO05D000838 2.6e-06 55.5 45 55.6
CsaV3_7G018780 Cucumis sativus L. HOM05D000735 ORTHO05D000838 2.6e-06 55.5 45 55.6
Aa31LG3G11400 Aethionema arabicum HOM05D000735 ORTHO05D000838 3.4e-06 55.1 32 71.9
Eucgr.F00635 Eucalyptus grandis HOM05D000735 ORTHO05D000838 3.4e-06 55.1 45 57.8
Lalb_Chr20g0116211 Lupinus albus HOM05D000735 ORTHO05D017708 3.4e-06 55.1 44 59.1
CAN.G492.27 Capsicum annuum HOM05D000735 ORTHO05D000838 4.4e-06 54.7 47 57.4
CARHR268780 Cardamine hirsuta HOM05D000735 ORTHO05D000838 4.4e-06 54.7 43 51.2
Lj8A175T76 Lonicera japonica HOM05D000735 ORTHO05D000838 4.4e-06 54.7 41 56.1
EL10Ac4g07641 Beta vulgaris HOM05D000735 ORTHO05D000838 5.8e-06 54.3 39 53.8
Sp6g17350 Schrenkiella parvula HOM05D000735 ORTHO05D000838 5.8e-06 54.3 32 68.8
TWI38G1584 Tripterygium wilfordii HOM05D000735 ORTHO05D000838 5.8e-06 54.3 41 61.0
MD11G1207200 Malus domestica HOM05D000735 ORTHO05D000838 7.6e-06 53.9 42 52.4
AUR62024750 Chenopodium quinoa HOM05D000735 ORTHO05D000838 9.9e-06 53.5 37 56.8
Dinv40820 Davidia involucrata HOM05D000735 ORTHO05D000838 9.9e-06 53.5 45 53.3
Lsat_1_v5_gn_7_113440 Lactuca sativa HOM05D000735 ORTHO05D000838 9.9e-06 53.5 112 31.2
vmacro11573 Vaccinium macrocarpon HOM05D000735 ORTHO05D000838 9.9e-06 53.5 50 52.0


User provided reference genes

Program Settings