Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p039717 Quercus lobata HOM05D008280 ORTHO05D010492 2.0e-42 175.3 83 100.0
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.1e-21 106.3 100 65.0
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 6.3e-20 100.5 110 57.3
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 3.2e-16 88.2 88 59.1
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 3.2e-16 88.2 88 59.1
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 3.2e-16 88.2 88 59.1
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 3.2e-16 88.2 88 59.1
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 4.2e-16 87.8 65 72.3
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 5.5e-16 87.4 70 68.6
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 7.2e-16 87.0 88 58.0
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 1.2e-15 86.3 61 77.0
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 1.6e-15 85.9 90 56.7
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 1.6e-15 85.9 88 56.8
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 2.1e-15 85.5 88 56.8
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 2.7e-15 85.1 65 70.8
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 3.6e-15 84.7 88 59.1
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 6.1e-15 84.0 58 75.9
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 8.0e-15 83.6 61 73.8
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 8.0e-15 83.6 90 55.6
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 8.0e-15 83.6 90 55.6
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 1.4e-14 82.8 65 69.2
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 1.4e-14 82.8 70 67.1
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 1.4e-14 82.8 70 67.1
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 2.3e-14 82.0 90 54.4
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 2.3e-14 82.0 90 54.4
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 3.0e-14 81.6 65 69.2
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 4.0e-14 81.3 90 56.7
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 5.2e-14 80.9 68 67.6
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 6.8e-14 80.5 65 69.2
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 6.8e-14 80.5 65 69.2
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 6.8e-14 80.5 65 69.2
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 6.8e-14 80.5 65 69.2
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 6.8e-14 80.5 65 69.2
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 6.8e-14 80.5 65 69.2
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 6.8e-14 80.5 65 69.2
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 1.2e-13 79.7 90 53.3
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 1.2e-13 79.7 65 66.2
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 2.0e-13 79.0 65 67.7
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 2.0e-13 79.0 65 67.7
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 2.6e-13 78.6 57 77.2
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 4.4e-13 77.8 61 72.1
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 5.7e-13 77.4 50 76.0
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 7.5e-13 77.0 68 64.7
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 7.5e-13 77.0 65 66.2
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 9.8e-13 76.6 78 57.7
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 8.3e-12 73.6 65 63.1
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 8.3e-12 73.6 75 57.3
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 1.4e-11 72.8 53 75.5
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 9.1e-11 70.1 57 63.2
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 1.6e-10 69.3 48 72.9
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 1.0e-06 56.6 46 69.6
Gohir.A13G092605 Gossypium hirsutum HOM05D008280 ORTHO05D010492 6.8e-06 53.9 39 69.2


User provided reference genes

Program Settings