Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p038864 Quercus lobata HOM05D008409 ORTHO05D010483 8.6e-84 313.5 151 100.0
Haze_13167 Corylus avellana HOM05D008409 ORTHO05D010483 1.4e-73 279.6 150 86.0
CiPaw.04G126300 Carya illinoinensis HOM05D008409 ORTHO05D010483 3.2e-70 268.5 150 83.3
Thecc.02G180200 Theobroma cacao HOM05D008409 ORTHO05D010483 5.1e-68 261.2 150 82.0
Potri.013G131000 Populus trichocarpa HOM05D008409 ORTHO05D010483 6.2e-66 254.2 148 81.1
Actinidia11031 Actinidia chinensis HOM05D008409 ORTHO05D010483 1.1e-65 253.4 150 78.0
Atru.chr6.2992 Acer truncatum HOM05D008409 ORTHO05D010483 1.4e-65 253.1 150 78.7
GSVIVG01020550001 Vitis vinifera HOM05D008409 ORTHO05D010483 5.3e-65 251.1 151 80.1
TAR627G0101 Trochodendron aralioides HOM05D008409 ORTHO05D010483 6.9e-65 250.8 146 81.5
Nn1g06548 Nelumbo nucifera HOM05D008409 ORTHO05D010483 5.8e-64 247.7 149 75.8
PGR142G1945 Punica granatum HOM05D008409 ORTHO05D010483 9.9e-64 246.9 150 74.0
Sed0018099 Sechium edule HOM05D008409 ORTHO05D010483 1.3e-63 246.5 151 72.2
ClCG07G002880 Citrullus lanatus HOM05D008409 ORTHO05D010483 2.2e-63 245.7 150 74.0
MELO3C018733.2 Cucumis melo HOM05D008409 ORTHO05D010483 3.8e-63 245.0 150 72.7
CsaV3_7G004460 Cucumis sativus L. HOM05D008409 ORTHO05D010483 6.4e-63 244.2 150 72.7
Sabra13G0110600 Salix brachista HOM05D008409 ORTHO05D010483 6.4e-63 244.2 148 77.7
Manes.12G089218 Manihot esculenta HOM05D008409 ORTHO05D010483 1.1e-62 243.4 147 77.6
Ciclev10017070m.g Citrus clementina HOM05D008409 ORTHO05D010483 1.4e-62 243.0 150 76.0
Gorai.012G128600 Gossypium raimondii HOM05D008409 ORTHO05D010483 1.3e-60 236.5 151 74.2
MD09G1247200 Malus domestica HOM05D008409 ORTHO05D010483 1.3e-60 236.5 149 74.5
Aqoxy1G02429 Aquilegia oxysepala HOM05D008409 ORTHO05D010483 8.7e-60 233.8 148 73.0
Gohir.A04G103600 Gossypium hirsutum HOM05D008409 ORTHO05D010483 1.9e-59 232.6 149 73.8
Gohir.D04G143000 Gossypium hirsutum HOM05D008409 ORTHO05D010483 5.6e-59 231.1 151 72.8
COL.COLO4_30195 Corchorus olitorius HOM05D008409 ORTHO05D010483 8.1e-58 227.3 137 76.6
TWI36G0630 Tripterygium wilfordii HOM05D008409 ORTHO05D010483 2.4e-57 225.7 150 67.3
Peaxi162Scf00059g01918 Petunia axillaris HOM05D008409 ORTHO05D010483 3.1e-57 225.3 147 71.4
CAN.G578.4 Capsicum annuum HOM05D008409 ORTHO05D010483 9.0e-57 223.8 144 72.9
PSO675G8696 Papaver somniferum HOM05D008409 ORTHO05D010483 1.5e-56 223.0 147 71.4
PSO541G0816 Papaver somniferum HOM05D008409 ORTHO05D010483 6.4e-55 217.6 149 69.1
PGSC0003DMG400013143 Solanum tuberosum HOM05D008409 ORTHO05D010483 6.4e-55 217.6 148 70.3
Os08g0374000 Oryza sativa ssp. japonica HOM05D008409 ORTHO05D010483 1.1e-54 216.9 150 65.3
CSS0031688 Camellia sinensis var. sinensis HOM05D008409 ORTHO05D010483 1.9e-54 216.1 142 76.8
Sopen10g004190 Solanum pennellii HOM05D008409 ORTHO05D010483 2.7e-53 212.2 148 69.6
Solyc10g008330.4 Solanum lycopersicum HOM05D008409 ORTHO05D010483 1.0e-52 210.3 148 68.9
MBI06_g04179_MAGBIO Magnolia biondii HOM05D008409 ORTHO05D010483 3.0e-52 208.8 148 67.6
ATR0737G133 Amborella trichopoda HOM05D008409 ORTHO05D010483 7.4e-51 204.1 147 62.6
QL08p038938 Quercus lobata HOM05D008409 ORTHO05D010483 3.4e-48 195.3 94 96.8
Nitab4.5_0009473g0020 Nicotiana tabacum HOM05D008409 ORTHO05D010483 1.2e-45 186.8 148 64.9
vmacro12306 Vaccinium macrocarpon HOM05D008409 ORTHO05D010483 7.9e-45 184.1 117 74.4
Dinv23634 Davidia involucrata HOM05D008409 ORTHO05D010483 6.3e-42 174.5 101 80.2
SEGI_00232 Sequoiadendron giganteum HOM05D008409 ORTHO05D010483 2.6e-40 169.1 154 51.9
SMO332G0032 Selaginella moellendorffii HOM05D008409 ORTHO05D000186 1.6e-13 80.1 139 32.4
SMO141G0292 Selaginella moellendorffii HOM05D000322 ORTHO05D010483 1.8e-12 76.6 147 29.9
Pp3c1_10460 Physcomitrium patens HOM05D012277 ORTHO05D010483 2.0e-11 73.2 149 32.2
Dinv24891 Davidia involucrata HOM05D000197 ORTHO05D000114 3.3e-11 72.4 136 35.3
Pp3c2_27350 Physcomitrium patens HOM05D012277 ORTHO05D010483 2.8e-10 69.3 141 31.9
Pp3c13_23010 Physcomitrium patens HOM05D012277 ORTHO05D010483 4.8e-10 68.6 141 33.3
Pp3c13_23030 Physcomitrium patens HOM05D012277 ORTHO05D010483 4.8e-10 68.6 141 33.3
A08p28340 Brassica napus HOM05D000197 ORTHO05D000114 6.3e-10 68.2 126 28.6
AagrBONN_evm.TU.Sc2ySwM_228.4478 Anthoceros agrestis HOM05D008409 ORTHO05D010483 1.1e-09 67.4 145 29.7
RcHm_v2.0_Chr4g0444321 Rosa chinensis HOM05D000197 ORTHO05D000114 1.1e-09 67.4 135 35.6
GSVIVG01020183001 Vitis vinifera HOM05D000197 ORTHO05D000114 2.4e-09 66.2 135 33.3
Pp3c8_12660 Physcomitrium patens HOM05D008409 ORTHO05D010483 3.1e-09 65.9 127 28.3
MD13G1088200 Malus domestica HOM05D000197 ORTHO05D000114 4.1e-09 65.5 140 33.6
TAR629G0887 Trochodendron aralioides HOM05D000197 ORTHO05D000114 4.1e-09 65.5 137 30.7
Mapoly0131s0013 Marchantia polymorpha HOM05D008409 ORTHO05D010483 5.3e-09 65.1 146 30.8
Ciclev10032973m.g Citrus clementina HOM05D000197 ORTHO05D000114 7.0e-09 64.7 135 34.8
MD16G1088600 Malus domestica HOM05D000197 ORTHO05D000114 1.6e-08 63.5 135 32.6
MELO3C012016.2 Cucumis melo HOM05D000197 ORTHO05D000114 2.0e-08 63.2 132 34.8
CsaV3_5G031770 Cucumis sativus L. HOM05D000197 ORTHO05D000114 2.0e-08 63.2 125 36.0
Pp3c11_13210 Physcomitrium patens HOM05D012277 ORTHO05D010483 2.0e-08 63.2 141 31.2
ClCG05G025130 Citrullus lanatus HOM05D000197 ORTHO05D000114 4.5e-08 62.0 132 34.1
AT1G23120 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 1.0e-07 60.8 132 23.5
Aa31LG7G7110 Aethionema arabicum HOM05D000197 ORTHO05D000114 1.3e-07 60.5 65 43.1
AL1G36690 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 1.3e-07 60.5 132 23.5
CANSAT01G1004 Cannabis sativa HOM05D000197 ORTHO05D000114 1.3e-07 60.5 151 26.5
MD16G1024000 Malus domestica HOM05D000197 ORTHO05D000114 1.3e-07 60.5 136 28.7
BcaC07g39184 Brassica carinata HOM05D000197 ORTHO05D000114 1.7e-07 60.1 126 24.6
C08p21740 Brassica napus HOM05D000197 ORTHO05D000114 1.7e-07 60.1 126 24.6
BolC8t49812H Brassica oleracea HOM05D000197 ORTHO05D000114 1.7e-07 60.1 126 24.6
Pp3c7_19830 Physcomitrium patens HOM05D012277 ORTHO05D010483 2.2e-07 59.7 141 29.1
Pp3c7_19850 Physcomitrium patens HOM05D012277 ORTHO05D010483 2.2e-07 59.7 141 29.1
Eucgr.F03349 Eucalyptus grandis HOM05D001593 ORTHO05D010032 2.9e-07 59.3 153 26.1
SMO347G0071 Selaginella moellendorffii HOM05D008409 ORTHO05D010483 2.9e-07 59.3 131 27.5
Mapoly0063s0024 Marchantia polymorpha HOM05D008409 ORTHO05D010032 3.8e-07 58.9 130 31.5
Prupe.1G258100 Prunus persica HOM05D000197 ORTHO05D000114 3.8e-07 58.9 135 31.1
Sp1g20560 Schrenkiella parvula HOM05D000197 ORTHO05D000114 3.8e-07 58.9 131 22.9
SMO337G0049 Selaginella moellendorffii HOM05D000322 ORTHO05D000186 3.8e-07 58.9 150 26.7
BraA08t34765Z Brassica rapa HOM05D000197 ORTHO05D000114 5.0e-07 58.5 126 24.6
SMO141G0029 Selaginella moellendorffii HOM05D000322 ORTHO05D000186 6.5e-07 58.2 142 27.5
Hund01084 Selenicereus undatus HOM05D008409 ORTHO05D010483 8.5e-07 57.8 41 68.3
Thhalv10009023m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 1.1e-06 57.4 132 23.5
BcaB03g11923 Brassica carinata HOM05D000197 ORTHO05D000114 1.9e-06 56.6 126 23.8
COL.COLO4_08129 Corchorus olitorius HOM05D001593 ORTHO05D002007 1.9e-06 56.6 120 30.0
Phvul.011G154100 Phaseolus vulgaris HOM05D001593 ORTHO05D010032 4.2e-06 55.5 152 24.3
THA.LOC104822191 Tarenaya hassleriana HOM05D000197 ORTHO05D000114 4.2e-06 55.5 112 33.9
unitig_22.g6474 Utricularia gibba HOM05D000197 ORTHO05D000114 4.2e-06 55.5 127 30.7
Carub.0002s1764 Capsella rubella HOM05D000197 ORTHO05D000114 9.4e-06 54.3 140 26.4
Potri.001G405600 Populus trichocarpa HOM05D001593 ORTHO05D010032 9.4e-06 54.3 150 21.3


User provided reference genes

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