Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 8.6e-224 780.0 398 100.0
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 2.9e-203 711.8 344 100.0
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 1.3e-158 563.5 379 71.8
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 2.2e-158 562.8 371 74.9
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 9.0e-157 557.4 332 79.5
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 1.2e-156 557.0 377 73.5
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 4.5e-156 555.1 377 72.4
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.7e-155 553.1 375 70.1
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 3.8e-155 552.0 376 73.4
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 3.8e-155 552.0 375 69.9
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 6.5e-155 551.2 375 69.6
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 4.6e-153 545.0 380 72.6
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 7.9e-153 544.3 352 74.7
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 3.0e-152 542.3 374 72.5
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 2.0e-151 539.7 333 74.5
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 9.7e-151 537.3 328 76.2
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 2.2e-150 536.2 366 69.1
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 8.2e-150 534.3 371 70.1
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.1e-149 533.9 371 71.7
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 2.4e-149 532.7 374 70.6
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 2.4e-149 532.7 332 74.4
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 3.4e-148 528.9 327 76.8
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 1.3e-147 526.9 374 69.5
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 2.2e-147 526.2 371 71.2
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 9.4e-146 520.8 347 70.3
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 2.7e-145 519.2 335 73.4
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 2.7e-145 519.2 377 67.4
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 2.3e-144 516.2 400 64.2
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 6.7e-144 514.6 365 68.8
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 6.7e-144 514.6 330 74.5
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 6.7e-144 514.6 352 71.9
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 2.0e-143 513.1 330 74.2
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 2.0e-143 513.1 380 66.6
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 2.6e-143 512.7 338 70.4
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 4.4e-143 511.9 346 72.0
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 1.7e-142 510.0 328 73.8
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 2.2e-142 509.6 376 68.4
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 3.7e-142 508.8 394 64.7
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 2.4e-141 506.1 345 71.0
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 1.2e-140 503.8 367 68.7
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 1.5e-140 503.4 427 58.8
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 1.5e-140 503.4 358 67.9
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 7.7e-140 501.1 328 72.9
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 7.7e-140 501.1 348 69.0
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 5.0e-139 498.4 372 65.1
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 1.5e-138 496.9 336 67.3
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 3.2e-138 495.7 357 66.7
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 4.2e-138 495.4 349 68.2
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 7.2e-138 494.6 335 69.6
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 7.2e-138 494.6 335 69.6
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 7.2e-138 494.6 332 69.6
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 9.4e-138 494.2 364 66.2
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 1.0e-136 490.7 332 70.2
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 1.8e-136 490.0 367 65.4
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 1.8e-136 490.0 335 69.0
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 3.0e-136 489.2 359 65.7
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 3.9e-136 488.8 334 69.5
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 3.9e-136 488.8 345 68.1
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 5.2e-136 488.4 346 67.6
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 8.8e-136 487.6 371 65.5
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 8.8e-136 487.6 334 70.1
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 1.1e-135 487.3 355 68.2
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 2.6e-135 486.1 347 67.1
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 3.3e-135 485.7 335 68.7
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 3.3e-135 485.7 335 68.7
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 1.1e-133 480.7 337 68.2
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.8e-133 479.9 334 68.3
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 1.2e-132 477.2 357 64.4
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 2.0e-132 476.5 329 68.7
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 3.5e-132 475.7 337 68.0
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 3.8e-131 472.2 331 67.7
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 4.2e-130 468.8 352 65.1
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 9.7e-127 457.6 418 55.7
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 3.7e-126 455.7 379 62.5
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 1.1e-122 444.1 528 48.5
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 4.0e-120 435.6 251 82.9
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 8.8e-120 434.5 310 69.4
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 1.7e-118 430.3 330 60.6
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.7e-118 430.3 362 58.0
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 2.8e-118 429.5 377 59.7
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 1.4e-117 427.2 333 61.6
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 3.1e-117 426.0 302 67.9
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 4.1e-117 425.6 352 58.2
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.3e-115 420.6 378 58.2
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 6.1e-113 411.8 327 63.6
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 8.0e-113 411.4 327 63.3
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 1.4e-112 410.6 242 76.9
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 2.6e-111 406.4 270 70.4
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 2.2e-110 403.3 331 61.0
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 5.6e-106 388.7 336 58.9
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 4.7e-105 385.6 270 70.4
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 2.0e-103 380.2 265 65.7
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 1.2e-97 360.9 303 59.7
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 9.8e-95 351.3 370 51.6
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 4.7e-89 332.4 322 50.6
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 4.1e-85 319.3 322 48.4
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 2.5e-82 310.1 235 60.9
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 4.7e-81 305.8 372 47.3
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 8.1e-81 305.1 165 82.4
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 1.9e-74 283.9 343 43.4
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 2.4e-69 266.9 192 65.1
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 1.9e-58 230.7 351 38.5
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 5.5e-37 159.5 163 50.9
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 1.6e-36 157.9 102 75.5
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.4e-32 144.1 78 84.6
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.8e-27 127.9 101 64.4
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.7e-20 104.0 74 70.3
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 1.2e-15 88.6 97 50.5
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 8.5e-14 82.4 61 55.7
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 2.7e-12 77.4 58 67.2
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 9.8e-10 68.9 39 79.5
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 1.3e-09 68.6 47 59.6
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 7.7e-07 59.3 71 40.8


User provided reference genes

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