Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 3.3e-86 321.6 158 100.0
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 3.4e-75 285.0 156 86.5
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 1.3e-74 283.1 156 86.5
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 7.4e-70 267.3 156 82.7
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 1.4e-68 263.1 155 81.9
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 1.2e-67 260.0 155 79.4
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 1.0e-66 256.9 160 78.8
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 3.8e-66 255.0 157 77.7
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 5.0e-66 254.6 153 79.1
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 1.1e-65 253.4 152 77.6
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 3.2e-65 251.9 155 76.8
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 7.2e-65 250.8 153 77.1
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 1.2e-64 250.0 154 76.0
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 4.7e-64 248.1 153 77.1
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 4.7e-64 248.1 156 76.9
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 4.7e-64 248.1 158 72.8
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 6.1e-64 247.7 155 77.4
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 7.9e-64 247.3 139 82.7
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 1.4e-63 246.5 155 77.4
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 1.8e-63 246.1 153 75.2
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 1.8e-63 246.1 156 76.3
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 1.8e-63 246.1 153 75.2
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 6.7e-63 244.2 153 77.1
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 8.8e-63 243.8 158 72.8
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 1.1e-62 243.4 157 72.6
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 1.5e-62 243.0 157 72.6
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 2.6e-62 242.3 150 78.7
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 2.6e-62 242.3 152 75.0
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 3.3e-62 241.9 155 72.3
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 5.7e-62 241.1 157 75.8
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 5.7e-62 241.1 153 75.8
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 7.4e-62 240.7 153 75.8
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 9.7e-62 240.4 153 74.5
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 9.7e-62 240.4 152 74.3
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 1.3e-61 240.0 152 70.4
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 1.7e-61 239.6 156 74.4
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 2.2e-61 239.2 154 75.3
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 3.7e-61 238.4 152 73.0
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 1.8e-60 236.1 156 71.8
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 1.8e-60 236.1 153 71.9
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 1.8e-60 236.1 152 75.0
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 2.4e-60 235.7 156 74.4
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 2.4e-60 235.7 156 74.4
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 2.4e-60 235.7 172 68.0
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 3.1e-60 235.3 151 77.5
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 3.1e-60 235.3 152 76.3
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 5.3e-60 234.6 152 71.7
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 5.3e-60 234.6 156 74.4
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 7.0e-60 234.2 152 71.7
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 7.0e-60 234.2 151 70.9
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 1.2e-59 233.4 151 76.8
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 1.6e-59 233.0 160 73.1
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 2.0e-59 232.6 151 74.2
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 2.6e-59 232.3 152 73.0
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 4.5e-59 231.5 153 73.2
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 4.5e-59 231.5 151 71.5
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 4.5e-59 231.5 153 71.2
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 4.5e-59 231.5 151 76.8
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 5.9e-59 231.1 156 71.8
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 7.7e-59 230.7 151 74.2
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 1.0e-58 230.3 158 69.0
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 1.3e-58 229.9 151 76.2
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 1.7e-58 229.6 159 70.4
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 2.9e-58 228.8 152 71.7
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 2.9e-58 228.8 158 68.4
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 3.8e-58 228.4 150 70.7
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 5.0e-58 228.0 164 67.7
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 1.1e-57 226.9 152 69.7
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 1.5e-57 226.5 153 70.6
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 5.5e-57 224.6 156 67.9
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 5.5e-57 224.6 156 67.9
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 5.5e-57 224.6 144 75.0
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 7.2e-57 224.2 151 68.9
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 9.4e-57 223.8 150 68.7
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 3.6e-56 221.9 153 69.3
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 4.7e-56 221.5 153 68.6
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 1.8e-55 219.5 156 67.9
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.8e-55 219.5 155 70.3
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 4.0e-55 218.4 152 65.1
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 6.7e-55 217.6 150 67.3
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 2.6e-54 215.7 155 65.8
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 4.4e-54 214.9 153 66.7
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 7.5e-54 214.2 152 67.1
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 1.3e-53 213.4 155 61.9
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 1.3e-53 213.4 154 66.2
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 1.7e-53 213.0 153 66.7
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 4.8e-53 211.5 151 66.9
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 3.1e-52 208.8 137 73.0
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 4.1e-52 208.4 139 71.2
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 5.9e-51 204.5 175 62.3
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 1.3e-50 203.4 156 60.9
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 8.5e-50 200.7 157 64.3
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 2.1e-48 196.1 153 60.1
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 4.0e-47 191.8 136 66.2
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 4.0e-47 191.8 153 60.1
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 1.4e-44 183.3 151 59.6
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 1.3e-42 176.8 151 58.9
Actinidia30478 Actinidia chinensis HOM05D007014 ORTHO05D008894 2.0e-38 162.9 98 79.6
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 9.8e-38 160.6 105 72.4
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 3.7e-37 158.7 103 72.8
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 4.9e-37 158.3 171 50.3
Lalb_Chr01g0005301 Lupinus albus HOM05D007014 ORTHO05D008894 1.1e-36 157.1 90 83.3
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 2.0e-35 152.9 164 48.8
QL12p004320 Quercus lobata HOM05D007014 ORTHO05D008894 4.5e-35 151.8 78 92.3
Lsat_1_v5_gn_8_132641 Lactuca sativa HOM05D007014 ORTHO05D008894 1.5e-33 146.7 92 73.9
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 3.0e-31 139.0 146 50.7
Ciclev10023600m.g Citrus clementina HOM05D007014 ORTHO05D008894 3.2e-28 129.0 82 72.0
Sabra11G0072100 Salix brachista HOM05D000036 ORTHO05D000095 2.7e-27 125.9 79 75.9
Sabra15G0066900 Salix brachista HOM05D000036 ORTHO05D000095 2.7e-27 125.9 79 75.9
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 2.1e-24 116.3 93 65.6
Hund01169 Selenicereus undatus HOM05D007014 ORTHO05D008894 3.4e-22 109.0 113 52.2
DCAR_013001 Daucus carota HOM05D007014 ORTHO05D008894 2.2e-21 106.3 81 64.2
AUR62037369 Chenopodium quinoa HOM05D007014 ORTHO05D008894 5.0e-18 95.1 67 65.7
MELO3C013609.2 Cucumis melo HOM05D007014 ORTHO05D008894 7.3e-17 91.3 69 62.3
PRCOL_00005877 Prasinoderma coloniale HOM05D007014 ORTHO05D008894 5.8e-14 81.6 97 45.4
SalBow1G7442 Salvia bowleyana HOM05D007014 ORTHO05D008894 2.9e-13 79.3 49 63.3
Cre17.g705950 Chlamydomonas reinhardtii HOM05D007014 ORTHO05D008894 1.1e-09 67.4 129 32.6
Pp3c2_27490 Physcomitrium patens HOM05D007014 ORTHO05D008894 4.3e-09 65.5 78 50.0
Hund03009 Selenicereus undatus HOM05D004398 ORTHO05D005268 5.8e-06 55.1 74 36.5
Potri.018G032400 Populus trichocarpa HOM05D004398 ORTHO05D005268 9.9e-06 54.3 67 38.8


User provided reference genes

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