Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p038027 Quercus lobata HOM05D004479 ORTHO05D337893 1.4e-207 726.1 367 100.0
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 4.2e-15 86.7 204 38.7
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 6.7e-13 79.3 201 36.3
Haze_16264 Corylus avellana HOM05D004479 ORTHO05D005597 2.0e-09 67.8 43 79.1
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 2.0e-09 67.8 199 35.2
Dinv37783 Davidia involucrata HOM05D004479 ORTHO05D005597 2.6e-09 67.4 43 79.1
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 4.5e-09 66.6 43 79.1
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 5.8e-09 66.2 43 76.7
vmacro18747 Vaccinium macrocarpon HOM05D004479 ORTHO05D005597 5.8e-09 66.2 43 76.7
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 9.9e-09 65.5 201 32.8
Lj6C65T2 Lonicera japonica HOM05D004479 ORTHO05D005597 1.3e-08 65.1 202 33.2
Rhsim08G0249800 Rhododendron simsii HOM05D004479 ORTHO05D005597 1.3e-08 65.1 43 74.4
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 1.7e-08 64.7 202 33.2
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 1.7e-08 64.7 200 31.0
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 2.2e-08 64.3 201 33.8
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea HOM05D004479 ORTHO05D005597 3.8e-08 63.5 201 33.3
ClCG07G014640 Citrullus lanatus HOM05D004479 ORTHO05D005597 3.8e-08 63.5 43 76.7
Gohir.A06G118600 Gossypium hirsutum HOM05D004479 ORTHO05D005597 3.8e-08 63.5 184 35.3
QL03p033126 Quercus lobata HOM05D004479 ORTHO05D005597 3.8e-08 63.5 38 86.8
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea HOM05D004479 ORTHO05D005597 4.9e-08 63.2 201 32.8
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 4.9e-08 63.2 198 33.8
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 4.9e-08 63.2 198 33.8
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 4.9e-08 63.2 43 74.4
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 6.4e-08 62.8 200 31.0
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 6.4e-08 62.8 43 74.4
Sopen03g041690 Solanum pennellii HOM05D004479 ORTHO05D005597 6.4e-08 62.8 91 45.1
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 6.4e-08 62.8 200 32.5
Aqoxy7G02788 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 8.4e-08 62.4 43 74.4
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 8.4e-08 62.4 198 33.8
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 1.1e-07 62.0 43 74.4
COL.COLO4_31168 Corchorus olitorius HOM05D004479 ORTHO05D005597 1.1e-07 62.0 199 33.2
Nitab4.5_0004918g0010 Nicotiana tabacum HOM05D004479 ORTHO05D005597 1.1e-07 62.0 41 78.0
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 1.1e-07 62.0 201 32.8
Peaxi162Scf00038g02640 Petunia axillaris HOM05D004479 ORTHO05D029161 1.1e-07 62.0 43 76.7
Peaxi162Scf00038g02656 Petunia axillaris HOM05D004479 ORTHO05D005597 1.1e-07 62.0 41 78.0
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 1.1e-07 62.0 43 74.4
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 1.1e-07 62.0 43 74.4
PGSC0003DMG400009164 Solanum tuberosum HOM05D004479 ORTHO05D005597 1.1e-07 62.0 41 78.0
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 1.4e-07 61.6 203 32.5
PSO063G0217 Papaver somniferum HOM05D004479 ORTHO05D005597 1.4e-07 61.6 197 31.5
PSO170G2367 Papaver somniferum HOM05D004479 ORTHO05D005597 1.4e-07 61.6 197 31.5
CDE02G4004 Ceratophyllum demersum HOM05D004479 ORTHO05D005597 1.9e-07 61.2 43 72.1
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 1.9e-07 61.2 195 33.3
Nitab4.5_0005664g0060 Nicotiana tabacum HOM05D004479 ORTHO05D005597 1.9e-07 61.2 41 78.0
PSO384G0383 Papaver somniferum HOM05D004479 ORTHO05D005597 1.9e-07 61.2 43 74.4
CAN.G790.12 Capsicum annuum HOM05D004479 ORTHO05D005597 2.4e-07 60.8 41 78.0
AUR62001343 Chenopodium quinoa HOM05D004479 ORTHO05D005597 2.4e-07 60.8 43 74.4
AUR62025661 Chenopodium quinoa HOM05D004479 ORTHO05D005597 2.4e-07 60.8 43 74.4
Nitab4.5_0002664g0040 Nicotiana tabacum HOM05D004479 ORTHO05D005597 2.4e-07 60.8 41 75.6
QL03p033134 Quercus lobata HOM05D004479 ORTHO05D005597 2.4e-07 60.8 42 81.0
SGA_v2.0_scaffold122G33268 Striga asiatica HOM05D004479 ORTHO05D005597 2.4e-07 60.8 244 31.1
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 3.2e-07 60.5 43 72.1
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 3.2e-07 60.5 43 72.1
Hund18598 Selenicereus undatus HOM05D004479 ORTHO05D005597 3.2e-07 60.5 43 72.1
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 4.2e-07 60.1 43 72.1
SalBow6G0079 Salvia bowleyana HOM05D004479 ORTHO05D005597 4.2e-07 60.1 42 71.4
Solyc03g123960.3 Solanum lycopersicum HOM05D004479 ORTHO05D005597 4.2e-07 60.1 41 75.6
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 5.5e-07 59.7 202 31.2
Psat3g175600 Pisum sativum HOM05D004479 ORTHO05D005597 7.1e-07 59.3 75 53.3
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 7.1e-07 59.3 200 30.5
DCAR_030619 Daucus carota HOM05D004479 ORTHO05D005597 9.3e-07 58.9 43 69.8
RcHm_v2.0_Chr4g0395721 Rosa chinensis HOM05D004479 ORTHO05D005597 9.3e-07 58.9 200 30.5
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 1.2e-06 58.5 203 31.5
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 1.2e-06 58.5 43 67.4
TWI09G1491 Tripterygium wilfordii HOM05D004479 ORTHO05D005597 1.2e-06 58.5 203 30.5
Aa31LG2G7330 Aethionema arabicum HOM05D004479 ORTHO05D005597 1.6e-06 58.2 40 70.0
Ah.15g094320 Amaranthus hybridus HOM05D004479 ORTHO05D005597 2.1e-06 57.8 43 69.8
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 2.1e-06 57.8 44 68.2
FAN17G0751 Fragaria x ananassa HOM05D004479 ORTHO05D005597 2.1e-06 57.8 205 29.8
MBI13_g01743_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 2.1e-06 57.8 43 69.8
MBI13_g34036_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 2.1e-06 57.8 43 69.8
Psat5g288040 Pisum sativum HOM05D004479 ORTHO05D005597 2.7e-06 57.4 203 30.5
Oeu062492.1 Olea europaea HOM05D004479 ORTHO05D005597 3.5e-06 57.0 43 67.4
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 3.5e-06 57.0 43 67.4
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 4.6e-06 56.6 202 31.7
Cpa.g.sc1515.2 Carica papaya HOM05D004479 ORTHO05D005597 4.6e-06 56.6 43 67.4
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 4.6e-06 56.6 203 31.0
FAN22G0181 Fragaria x ananassa HOM05D004479 ORTHO05D005597 6.0e-06 56.2 199 30.2
Lj3g0018425 Lotus japonicus HOM05D004479 ORTHO05D005597 6.0e-06 56.2 43 62.8
Sp2g14070 Schrenkiella parvula HOM05D004479 ORTHO05D005597 6.0e-06 56.2 40 70.0
THA.LOC104800314 Tarenaya hassleriana HOM05D004479 ORTHO05D005597 6.0e-06 56.2 42 69.0
Haze_06543 Corylus avellana HOM05D000570 ORTHO05D002740 7.9e-06 55.8 35 80.0
PSO836G0001 Papaver somniferum HOM05D004479 ORTHO05D005597 7.9e-06 55.8 192 30.7
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 7.9e-06 55.8 103 43.7
Zm00001eb320420 Zea mays HOM05D004479 ORTHO05D005597 7.9e-06 55.8 44 65.9


User provided reference genes

Program Settings