Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p037725 Quercus lobata HOM05D000003 ORTHO05D000167 4.9e-48 194.1 97 100.0
QL07p038035 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-40 168.7 91 92.3
QL05p068740 Quercus lobata HOM05D000003 ORTHO05D000004 6.0e-38 160.6 85 95.3
QL05p069113 Quercus lobata HOM05D000003 ORTHO05D000004 6.0e-38 160.6 85 95.3
QL03p066006 Quercus lobata HOM05D001020 ORTHO05D014173 6.0e-30 134.0 96 64.6
QL04p064882 Quercus lobata HOM05D000003 ORTHO05D000167 5.1e-29 131.0 96 62.5
QL93p0215_0031 Quercus lobata HOM05D000003 ORTHO05D000167 6.7e-29 130.6 96 62.5
QL05p017661 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-27 125.9 96 60.4
QL04p069059 Quercus lobata HOM05D000003 ORTHO05D000167 3.7e-27 124.8 96 60.4
QL09p001270 Quercus lobata HOM05D000003 ORTHO05D000167 8.1e-27 123.6 96 60.4
QL05p038991 Quercus lobata HOM05D000003 ORTHO05D000167 1.5e-25 119.4 96 57.3
QL02p037922 Quercus lobata HOM05D000003 ORTHO05D000167 2.6e-25 118.6 92 62.0
QL02p037441 Quercus lobata HOM05D000003 ORTHO05D000167 3.4e-25 118.2 92 62.0
QL10p017193 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-24 115.5 97 58.8
QL11p056556 Quercus lobata HOM05D000003 ORTHO05D000167 1.9e-12 75.9 95 40.0
QL05p065428 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-12 75.1 95 41.1
QL05p042365 Quercus lobata HOM05D000003 ORTHO05D000167 7.4e-12 73.9 95 37.9
QL10p030412 Quercus lobata HOM05D000003 ORTHO05D000167 9.7e-12 73.6 95 38.9
QL12p001149 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-11 72.4 95 41.1
CSS0016328 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 3.7e-11 71.6 94 36.2
Haze_13529 Corylus avellana HOM05D054259 ORTHO05D024892 6.3e-11 70.9 84 35.7
QL05p012625 Quercus lobata HOM05D000003 ORTHO05D000167 6.3e-11 70.9 93 40.9
CSS0031955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 2.4e-10 68.9 94 35.1
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 3.1e-10 68.6 94 36.2
CANSAT21G1100 Cannabis sativa HOM05D000003 ORTHO05D000167 9.0e-10 67.0 91 31.9
Hma1.2p1_0989F.1_g244760 Hydrangea macrophylla HOM05D000003 ORTHO05D000006 1.2e-09 66.6 92 37.0
CSS0000735 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 1.5e-09 66.2 94 36.2
CANSAT56G3196 Cannabis sativa HOM05D000003 ORTHO05D000167 2.0e-09 65.9 90 37.8
COL.COLO4_10225 Corchorus olitorius HOM05D000003 ORTHO05D000167 2.0e-09 65.9 92 35.9
QL08p031025 Quercus lobata HOM05D000003 ORTHO05D000004 2.0e-09 65.9 89 34.8
CANSAT01G2406 Cannabis sativa HOM05D000003 ORTHO05D000167 2.6e-09 65.5 95 38.9
Haze_17656 Corylus avellana HOM05D000003 ORTHO05D000167 2.6e-09 65.5 92 38.0
Haze_19506 Corylus avellana HOM05D000003 ORTHO05D000167 2.6e-09 65.5 92 38.0
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 2.6e-09 65.5 95 35.8
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 4.5e-09 64.7 92 37.0
QL08p006218 Quercus lobata HOM05D000003 ORTHO05D000167 4.5e-09 64.7 95 35.8
QL11p002550 Quercus lobata HOM05D000281 ORTHO05D007047 4.5e-09 64.7 95 35.8
QL12p015728 Quercus lobata HOM05D000003 ORTHO05D000167 7.6e-09 63.9 96 34.4
CANSAT64G1612 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-08 63.5 95 35.8
Duzib132G0669 Durio zibethinus HOM05D000003 ORTHO05D000167 1.7e-08 62.8 84 35.7
FvH4_6g18902 Fragaria vesca HOM05D000003 ORTHO05D010713 2.2e-08 62.4 95 38.9
QL02p023292 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-08 62.4 95 35.8
QL07p036969 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-08 62.4 92 38.0
CANSAT56G1507 Cannabis sativa HOM05D000003 ORTHO05D000167 2.9e-08 62.0 95 34.7
Haze_23165 Corylus avellana HOM05D000003 ORTHO05D000167 2.9e-08 62.0 92 35.9
CANSAT01G1451 Cannabis sativa HOM05D000003 ORTHO05D000167 3.8e-08 61.6 95 34.7
CANSAT54G0125 Cannabis sativa HOM05D000003 ORTHO05D000167 3.8e-08 61.6 91 30.8
AUR62034867 Chenopodium quinoa HOM05D000003 ORTHO05D000167 3.8e-08 61.6 95 35.8
COL.COLO4_35519 Corchorus olitorius HOM05D009774 ORTHO05D000167 3.8e-08 61.6 93 32.3
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 3.8e-08 61.6 96 37.5
CANSAT01G0197 Cannabis sativa HOM05D000003 ORTHO05D000167 5.0e-08 61.2 93 34.4
QL05p060814 Quercus lobata HOM05D000003 ORTHO05D000167 5.0e-08 61.2 92 35.9
QL07p011546 Quercus lobata HOM05D000003 ORTHO05D000167 5.0e-08 61.2 95 35.8
CANSAT25G2810 Cannabis sativa HOM05D000003 ORTHO05D000167 6.5e-08 60.8 95 35.8
RcHm_v2.0_Chr5g0065261 Rosa chinensis HOM05D000003 ORTHO05D006737 6.5e-08 60.8 91 39.6
CANSAT01G0793 Cannabis sativa HOM05D000003 ORTHO05D000004 8.5e-08 60.5 95 34.7
COL.COLO4_13164 Corchorus olitorius HOM05D009774 ORTHO05D000167 8.5e-08 60.5 95 30.5
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 8.5e-08 60.5 91 39.6
RcHm_v2.0_Chr6g0288751 Rosa chinensis HOM05D000003 ORTHO05D006737 8.5e-08 60.5 91 39.6
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 8.5e-08 60.5 97 33.0
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 8.5e-08 60.5 97 33.0
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 8.5e-08 60.5 97 33.0
CANSAT11G2397 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-07 60.1 95 33.7
QL06p052521 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-07 60.1 74 41.9
EL10Ac5g12505 Beta vulgaris HOM05D000003 ORTHO05D000167 1.4e-07 59.7 95 32.6
CANSAT54G2704 Cannabis sativa HOM05D000003 ORTHO05D000167 1.4e-07 59.7 92 35.9
EL10Ac9g21339 Beta vulgaris HOM05D000003 ORTHO05D000167 1.9e-07 59.3 98 34.7
CANSAT21G0177 Cannabis sativa HOM05D000003 ORTHO05D000167 1.9e-07 59.3 95 34.7
COL.COLO4_05919 Corchorus olitorius HOM05D009774 ORTHO05D000167 1.9e-07 59.3 93 29.0
QL06p034986 Quercus lobata HOM05D000044 ORTHO05D000051 1.9e-07 59.3 94 34.0
QL06p048711 Quercus lobata HOM05D000027 ORTHO05D000066 1.9e-07 59.3 78 35.9
QL12p015842 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-07 59.3 79 39.2
COL.COLO4_23207 Corchorus olitorius HOM05D009774 ORTHO05D000167 2.5e-07 58.9 91 35.2
QL01p048703 Quercus lobata HOM05D000003 ORTHO05D000167 2.5e-07 58.9 95 31.6
QL02p034159 Quercus lobata HOM05D016498 ORTHO05D000167 2.5e-07 58.9 95 34.7
QL11p000147 Quercus lobata HOM05D000003 ORTHO05D000167 2.5e-07 58.9 95 34.7
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-07 58.9 97 33.0
Sed0016476 Sechium edule HOM05D024375 ORTHO05D000167 2.5e-07 58.9 92 30.4
CANSAT21G1802 Cannabis sativa HOM05D000003 ORTHO05D000167 3.2e-07 58.5 89 31.5
CANSAT25G2465 Cannabis sativa HOM05D000003 ORTHO05D000167 3.2e-07 58.5 95 33.7
CANSAT64G2436 Cannabis sativa HOM05D000003 ORTHO05D000167 3.2e-07 58.5 89 32.6
RcHm_v2.0_Chr6g0289791 Rosa chinensis HOM05D000003 ORTHO05D011454 3.2e-07 58.5 92 33.7
EL10Ac7g17531 Beta vulgaris HOM05D000003 ORTHO05D000004 4.2e-07 58.2 95 32.6
CANSAT56G2674 Cannabis sativa HOM05D000003 ORTHO05D000167 4.2e-07 58.2 97 32.0
Haze_19825 Corylus avellana HOM05D009031 ORTHO05D000167 4.2e-07 58.2 93 32.3
Dinv08915 Davidia involucrata HOM05D000003 ORTHO05D000167 4.2e-07 58.2 93 32.3
CANSAT01G1170 Cannabis sativa HOM05D000003 ORTHO05D000167 5.5e-07 57.8 90 32.2
CANSAT01G1633 Cannabis sativa HOM05D000003 ORTHO05D000167 5.5e-07 57.8 89 34.8
CANSAT64G2653 Cannabis sativa HOM05D000003 ORTHO05D000167 5.5e-07 57.8 95 33.7
RcHm_v2.0_Chr7g0203591 Rosa chinensis HOM05D009322 ORTHO05D010713 5.5e-07 57.8 96 36.5
TWI23G0529 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.5e-07 57.8 95 34.7
TWI53G0186 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.5e-07 57.8 94 36.2
AUR62013413 Chenopodium quinoa HOM05D000003 ORTHO05D000167 7.2e-07 57.4 95 33.7
CANSAT11G0460 Cannabis sativa HOM05D000003 ORTHO05D000167 9.3e-07 57.0 95 30.5
CANSAT11G1896 Cannabis sativa HOM05D000003 ORTHO05D000167 9.3e-07 57.0 95 32.6
CANSAT56G1118 Cannabis sativa HOM05D000003 ORTHO05D000167 9.3e-07 57.0 95 32.6
CANSAT78G2368 Cannabis sativa HOM05D000003 ORTHO05D000167 9.3e-07 57.0 92 33.7
COL.COLO4_16438 Corchorus olitorius HOM05D009774 ORTHO05D000167 9.3e-07 57.0 92 31.5
Dinv08495 Davidia involucrata HOM05D000003 ORTHO05D000167 9.3e-07 57.0 93 30.1
Lj9P307T25 Lonicera japonica HOM05D000003 ORTHO05D000167 9.3e-07 57.0 97 30.9
QL01p015882 Quercus lobata HOM05D000003 ORTHO05D000167 9.3e-07 57.0 95 36.8
QL01p030395 Quercus lobata HOM05D000003 ORTHO05D000167 9.3e-07 57.0 96 33.3
QL05p007523 Quercus lobata HOM05D000003 ORTHO05D000167 9.3e-07 57.0 95 30.5
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 9.3e-07 57.0 97 32.0
CANSAT21G2373 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-06 56.6 98 38.8
CANSAT56G2069 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-06 56.6 96 33.3
CANSAT80G0788 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-06 56.6 95 32.6
FAN28G2522 Fragaria x ananassa HOM05D015403 ORTHO05D010713 1.2e-06 56.6 94 36.2
EL10Ac9g22665 Beta vulgaris HOM05D000003 ORTHO05D000167 1.6e-06 56.2 92 31.5
CANSAT01G2358 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-06 56.2 93 33.3
CANSAT35G1565 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-06 56.2 89 30.3
CANSAT56G0969 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-06 56.2 89 31.5
CANSAT64G0950 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-06 56.2 96 33.3
Lj4C754G7 Lonicera japonica HOM05D000003 ORTHO05D000167 1.6e-06 56.2 84 36.9
EL10Ac6g14087 Beta vulgaris HOM05D000003 ORTHO05D000167 2.1e-06 55.8 97 28.9
CANSAT01G2533 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-06 55.8 95 32.6
CANSAT56G1552 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-06 55.8 95 31.6
CANSAT64G2278 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-06 55.8 95 36.8
RcHm_v2.0_Chr2g0109541 Rosa chinensis HOM05D009322 ORTHO05D010713 2.1e-06 55.8 96 33.3
TAR331G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000167 2.1e-06 55.8 97 33.0
CANSAT11G1229 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-06 55.5 92 31.5
CANSAT54G2214 Cannabis sativa HOM05D000003 ORTHO05D000167 2.7e-06 55.5 95 31.6
CANSAT54G2762 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-06 55.5 95 32.6
AUR62019632 Chenopodium quinoa HOM05D018709 ORTHO05D000167 2.7e-06 55.5 94 28.7
Haze_13888 Corylus avellana HOM05D009031 ORTHO05D000167 2.7e-06 55.5 98 32.7
Haze_25213 Corylus avellana HOM05D000335 ORTHO05D001251 2.7e-06 55.5 77 37.7
RcHm_v2.0_Chr6g0254571 Rosa chinensis HOM05D009322 ORTHO05D010713 2.7e-06 55.5 96 35.4
Sed0016108 Sechium edule HOM05D015284 ORTHO05D000167 2.7e-06 55.5 91 35.2
CANSAT35G0312 Cannabis sativa HOM05D000003 ORTHO05D000167 3.6e-06 55.1 95 29.5
CANSAT35G1937 Cannabis sativa HOM05D000003 ORTHO05D000004 3.6e-06 55.1 78 37.2
CANSAT80G0316 Cannabis sativa HOM05D000003 ORTHO05D000167 3.6e-06 55.1 88 35.2
CANSAT80G2787 Cannabis sativa HOM05D000003 ORTHO05D000167 3.6e-06 55.1 97 30.9
QL03p054973 Quercus lobata HOM05D016498 ORTHO05D000167 3.6e-06 55.1 84 33.3
QL05p051227 Quercus lobata HOM05D000003 ORTHO05D000004 3.6e-06 55.1 95 33.7
Sed0025544 Sechium edule HOM05D000003 ORTHO05D000167 3.6e-06 55.1 96 29.2
Haze_01709 Corylus avellana HOM05D004092 ORTHO05D005448 4.6e-06 54.7 92 29.3
Dinv32432 Davidia involucrata HOM05D000003 ORTHO05D011454 4.6e-06 54.7 93 30.1
Duzib150G1547 Durio zibethinus HOM05D000003 ORTHO05D000167 4.6e-06 54.7 95 36.8
FvH4_2g17721 Fragaria vesca HOM05D000003 ORTHO05D000022 4.6e-06 54.7 97 29.9
Manes.09G042601 Manihot esculenta HOM05D000003 ORTHO05D000004 4.6e-06 54.7 75 41.3
QL09p043312 Quercus lobata HOM05D000003 ORTHO05D000167 4.6e-06 54.7 94 34.0
RcHm_v2.0_Chr7g0212601 Rosa chinensis HOM05D000003 ORTHO05D006737 4.6e-06 54.7 91 34.1
EL10Ac7g18097 Beta vulgaris HOM05D000003 ORTHO05D000167 6.1e-06 54.3 93 30.1
CANSAT56G1927 Cannabis sativa HOM05D000003 ORTHO05D000167 6.1e-06 54.3 97 33.0
CANSAT64G0247 Cannabis sativa HOM05D000003 ORTHO05D000004 6.1e-06 54.3 95 31.6
CANSAT78G2528 Cannabis sativa HOM05D000003 ORTHO05D000167 6.1e-06 54.3 88 36.4
AUR62026326 Chenopodium quinoa HOM05D000003 ORTHO05D000167 6.1e-06 54.3 97 30.9
Ca_26082_v3 Cicer arietinum L. HOM05D009584 ORTHO05D011650 6.1e-06 54.3 92 30.4
QL05p005727 Quercus lobata HOM05D000432 ORTHO05D000320 6.1e-06 54.3 92 32.6
RcHm_v2.0_Chr5g0033371 Rosa chinensis HOM05D000003 ORTHO05D006737 6.1e-06 54.3 91 31.9
RcHm_v2.0_Chr5g0066251 Rosa chinensis HOM05D000003 ORTHO05D011454 6.1e-06 54.3 92 32.6
RcHm_v2.0_Chr7g0229351 Rosa chinensis HOM05D009322 ORTHO05D010713 6.1e-06 54.3 97 32.0
TAR199G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 6.1e-06 54.3 75 32.0
CANSAT11G0285 Cannabis sativa HOM05D000003 ORTHO05D000167 7.9e-06 53.9 92 30.4
CANSAT21G0999 Cannabis sativa HOM05D000003 ORTHO05D000004 7.9e-06 53.9 89 31.5
CANSAT21G2268 Cannabis sativa HOM05D000003 ORTHO05D000167 7.9e-06 53.9 89 29.2
FvH4_6g19251 Fragaria vesca HOM05D000003 ORTHO05D000004 7.9e-06 53.9 94 35.1


User provided reference genes

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