Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 1.6e-253 879.0 464 100.0
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 3.1e-185 652.1 470 77.2
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 9.1e-185 650.6 470 77.0
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 3.5e-168 595.5 468 71.8
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 7.1e-145 518.1 484 65.3
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 2.4e-140 503.1 485 63.9
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 1.3e-138 497.3 490 62.7
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 2.4e-137 493.0 472 61.0
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 3.2e-137 492.7 475 61.3
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 6.2e-133 478.4 483 62.5
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 1.1e-132 477.6 474 59.3
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 1.8e-132 476.9 474 59.5
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 1.8e-132 476.9 474 59.3
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 4.0e-132 475.7 468 61.5
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 2.6e-131 473.0 475 60.0
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 2.6e-131 473.0 475 59.8
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 1.9e-126 456.8 471 59.4
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 7.4e-126 454.9 472 60.6
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 9.6e-126 454.5 471 59.9
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 2.1e-125 453.4 483 57.6
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 2.1e-125 453.4 480 60.8
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 2.8e-125 453.0 474 59.5
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 2.8e-125 453.0 472 58.5
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 3.7e-125 452.6 474 59.3
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 9.0e-124 448.0 481 60.3
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.5e-123 447.2 481 59.9
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 1.2e-120 437.6 472 58.3
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 1.6e-120 437.2 503 56.7
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 1.6e-120 437.2 472 58.3
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 2.3e-119 433.3 481 58.0
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.0e-119 433.0 481 58.0
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 3.0e-119 433.0 473 58.1
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 2.5e-118 429.9 474 55.3
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 5.7e-118 428.7 480 56.9
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.6e-117 427.2 476 55.7
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 1.1e-116 424.5 475 57.1
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 1.8e-116 423.7 472 57.0
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 6.9e-116 421.8 464 55.6
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 6.5e-114 415.2 500 53.0
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 4.2e-113 412.5 503 52.5
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 2.7e-112 409.8 497 52.3
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 6.1e-112 408.7 497 52.5
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 1.9e-110 403.7 497 51.9
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 1.2e-107 394.4 488 51.4
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 2.0e-107 393.7 428 55.4
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 7.7e-107 391.7 500 50.8
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 1.1e-105 387.9 498 51.6
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 2.5e-105 386.7 481 52.6
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 7.9e-104 381.7 488 53.1
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 1.0e-103 381.3 495 51.9
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 3.9e-103 379.4 500 49.2
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 7.4e-102 375.2 498 53.2
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 8.2e-101 371.7 480 52.7
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.1e-100 371.3 469 50.7
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 2.4e-100 370.2 479 52.0
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 3.8e-98 362.8 503 51.1
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 8.2e-93 345.1 527 46.1
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 3.1e-92 343.2 477 49.1
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 2.9e-90 336.7 457 50.8
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 7.2e-89 332.0 486 47.9
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 1.8e-87 327.4 495 46.1
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 2.3e-87 327.0 413 53.8
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 6.7e-87 325.5 508 46.1
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 1.7e-85 320.9 316 60.8
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 2.8e-85 320.1 506 47.0
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 3.1e-84 316.6 506 46.8
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 1.2e-83 314.7 465 47.1
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 2.2e-82 310.5 346 57.2
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 3.2e-81 306.6 465 46.9
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 1.5e-78 297.7 467 47.1
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 2.2e-77 293.9 483 43.9
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 1.1e-76 291.6 462 46.1
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 9.1e-76 288.5 466 45.9
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 4.5e-75 286.2 475 45.7
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 5.0e-74 282.7 464 45.3
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 1.5e-73 281.2 475 45.5
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 1.9e-73 280.8 464 46.1
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 9.5e-73 278.5 488 43.6
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 4.7e-72 276.2 448 45.5
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 6.1e-72 275.8 464 45.9
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 4.4e-70 269.6 543 39.4
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 7.5e-70 268.9 462 44.2
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 7.5e-70 268.9 500 41.4
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 1.8e-68 264.2 506 41.7
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 3.6e-64 250.0 463 41.9
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 4.7e-64 249.6 463 41.9
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 1.0e-63 248.4 470 41.1
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 1.7e-61 241.1 465 41.5
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 3.7e-61 240.0 523 40.9
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 6.4e-61 239.2 522 41.0
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 8.3e-61 238.8 475 40.4
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 3.6e-56 223.4 372 45.2
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 3.1e-55 220.3 495 39.0
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 1.3e-53 214.9 480 39.6
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 9.2e-52 208.8 469 39.7
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 1.2e-51 208.4 393 42.0
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 3.6e-48 196.8 488 37.1
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 5.2e-47 193.0 459 37.9
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 1.2e-46 191.8 455 36.5
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 5.8e-46 189.5 461 37.3
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 1.1e-44 185.3 456 37.1
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 2.1e-40 171.0 479 34.0
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 1.4e-39 168.3 374 40.6
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 6.8e-39 166.0 350 39.1
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 7.6e-38 162.5 537 32.8
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 1.2e-32 145.2 177 51.4
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 1.8e-31 141.4 178 51.1
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 6.9e-31 139.4 378 37.6
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 1.7e-29 134.8 467 33.0
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 7.1e-28 129.4 510 29.6
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 2.3e-26 124.4 169 50.3
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 5.8e-22 109.8 160 46.2
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 3.6e-16 90.5 459 25.9
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 5.3e-15 86.7 93 51.6
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 1.5e-14 85.1 480 27.5
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 4.6e-11 73.6 68 54.4
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 4.6e-11 73.6 158 38.0
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 1.8e-10 71.6 158 38.6
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 2.3e-10 71.2 158 38.0
SGA_v2.0_scaffold51G18895 Striga asiatica HOM05D001803 ORTHO05D001686 1.2e-06 58.9 170 35.3
Os06g0683900 Oryza sativa ssp. japonica HOM05D032587 ORTHO05D037111 4.5e-06 57.0 86 41.9


User provided reference genes

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