Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p037020 Quercus lobata HOM05D007836 ORTHO05D009876 5.3e-44 180.6 91 100.0
Cfa014529 Carpinus fangiana HOM05D007836 ORTHO05D009876 2.1e-24 115.5 97 67.0
CiPaw.03G168400 Carya illinoinensis HOM05D007836 ORTHO05D009876 6.3e-21 104.0 95 61.1
Sabra19G0118200 Salix brachista HOM05D007836 ORTHO05D009876 1.0e-18 96.7 91 53.8
Potri.019G117800 Populus trichocarpa HOM05D007836 ORTHO05D009876 5.0e-18 94.4 91 52.7
CiPaw.10G117600 Carya illinoinensis HOM05D007836 ORTHO05D009876 8.5e-18 93.6 91 57.1
Nn1g03860 Nelumbo nucifera HOM05D007836 ORTHO05D009876 2.1e-16 89.0 91 60.4
Nn1g03862 Nelumbo nucifera HOM05D007836 ORTHO05D009876 2.1e-16 89.0 91 60.4
Thecc.02G170500 Theobroma cacao HOM05D007836 ORTHO05D009876 5.1e-15 84.3 91 52.7
Manes.13G152300 Manihot esculenta HOM05D007836 ORTHO05D009876 8.8e-15 83.6 90 48.9
Ciclev10018116m.g Citrus clementina HOM05D007836 ORTHO05D009876 1.5e-14 82.8 90 54.4
QL05p081073 Quercus lobata HOM05D007836 ORTHO05D009876 1.9e-14 82.4 86 54.7
COL.COLO4_13657 Corchorus olitorius HOM05D007836 ORTHO05D009876 2.5e-14 82.0 91 52.7
Medtr2g011690 Medicago truncatula HOM05D007836 ORTHO05D009876 4.3e-14 81.3 93 49.5
Potri.004G033300 Populus trichocarpa HOM05D007836 ORTHO05D009876 1.7e-13 79.3 92 54.3
Potri.013G148300 Populus trichocarpa HOM05D007836 ORTHO05D009876 2.2e-13 79.0 92 50.0
Psat1g208960 Pisum sativum HOM05D007836 ORTHO05D009876 2.8e-13 78.6 93 49.5
Sabra04G0019100 Salix brachista HOM05D007836 ORTHO05D009876 3.7e-13 78.2 92 56.5
TPR.G36842 Trifolium pratense HOM05D007836 ORTHO05D009876 6.3e-13 77.4 91 48.4
Ciclev10017323m.g Citrus clementina HOM05D007836 ORTHO05D009876 8.2e-13 77.0 92 53.3
COL.COLO4_31599 Corchorus olitorius HOM05D007836 ORTHO05D009876 1.8e-12 75.9 91 51.6
Migut.M01222 Erythranthe guttata HOM05D007836 ORTHO05D009876 2.4e-12 75.5 86 53.5
Hma1.2p1_1182F.1_g264760 Hydrangea macrophylla HOM05D007836 ORTHO05D009876 2.4e-12 75.5 87 50.6
Cfa000343 Carpinus fangiana HOM05D007836 ORTHO05D009876 3.1e-12 75.1 91 52.7
Ca_00250_v3 Cicer arietinum L. HOM05D007836 ORTHO05D009876 3.1e-12 75.1 91 46.2
Ca_29769_v3 Cicer arietinum L. HOM05D007836 ORTHO05D009876 3.1e-12 75.1 91 46.2
Ca_29839_v3 Cicer arietinum L. HOM05D007836 ORTHO05D009876 3.1e-12 75.1 91 46.2
Haze_06588 Corylus avellana HOM05D007836 ORTHO05D009876 9.1e-12 73.6 91 50.5
Atru.chr6.3083 Acer truncatum HOM05D007836 ORTHO05D009876 2.0e-11 72.4 102 49.0
Thecc.06G201100 Theobroma cacao HOM05D007836 ORTHO05D009876 2.0e-11 72.4 91 45.1
TAR629G2038 Trochodendron aralioides HOM05D007836 ORTHO05D009876 2.0e-11 72.4 92 47.8
MBI18_g27690_MAGBIO Magnolia biondii HOM05D007836 ORTHO05D009876 4.5e-11 71.2 92 51.1
Manes.16G019800 Manihot esculenta HOM05D007836 ORTHO05D009876 5.9e-11 70.9 92 47.8
Potri.011G041700 Populus trichocarpa HOM05D007836 ORTHO05D009876 7.7e-11 70.5 87 47.1
Glyma.13G247000 Glycine max HOM05D007836 ORTHO05D009876 2.9e-10 68.6 93 48.4
Gohir.A10G021700 Gossypium hirsutum HOM05D007836 ORTHO05D009876 2.9e-10 68.6 91 41.8
TWI38G1692 Tripterygium wilfordii HOM05D007836 ORTHO05D009876 2.9e-10 68.6 91 49.5
Nitab4.5_0000649g0060 Nicotiana tabacum HOM05D007836 ORTHO05D009876 3.8e-10 68.2 94 53.2
FAN11G3258 Fragaria x ananassa HOM05D007836 ORTHO05D009876 8.5e-10 67.0 96 45.8
Sabra11G0028600 Salix brachista HOM05D007836 ORTHO05D009876 1.4e-09 66.2 76 56.6
TAR627G0603 Trochodendron aralioides HOM05D007836 ORTHO05D009876 2.5e-09 65.5 86 46.5
Gorai.011G023600 Gossypium raimondii HOM05D007836 ORTHO05D009876 5.5e-09 64.3 92 40.2
Rhsim02G0119100 Rhododendron simsii HOM05D007836 ORTHO05D009876 7.2e-09 63.9 73 52.1
Gohir.D13G064750 Gossypium hirsutum HOM05D007836 ORTHO05D009876 9.4e-09 63.5 77 49.4
Gorai.013G073500 Gossypium raimondii HOM05D007836 ORTHO05D009876 9.4e-09 63.5 77 49.4
Gohir.A13G057150 Gossypium hirsutum HOM05D007836 ORTHO05D009876 2.7e-08 62.0 77 48.1
Nitab4.5_0005389g0040 Nicotiana tabacum HOM05D007836 ORTHO05D009876 3.6e-08 61.6 75 53.3
Gohir.D10G022500 Gossypium hirsutum HOM05D007836 ORTHO05D009876 4.7e-08 61.2 97 38.1
FvH4_3g03810 Fragaria vesca HOM05D007836 ORTHO05D009876 6.1e-08 60.8 97 43.3
FAN16G2096 Fragaria x ananassa HOM05D007836 ORTHO05D009876 6.1e-08 60.8 97 43.3
Prupe.4G035300 Prunus persica HOM05D007836 ORTHO05D009876 7.9e-08 60.5 91 46.2
Aqoxy1G03904 Aquilegia oxysepala HOM05D007836 ORTHO05D009876 1.4e-07 59.7 91 41.8
Sabra19G0135400 Salix brachista HOM05D007836 ORTHO05D009876 1.4e-07 59.7 66 50.0
Manes.12G082200 Manihot esculenta HOM05D007836 ORTHO05D009876 3.0e-07 58.5 74 50.0
AUR62015588 Chenopodium quinoa HOM05D000831 ORTHO05D000660 6.7e-07 57.4 41 63.4
Migut.H01523 Erythranthe guttata HOM05D007836 ORTHO05D009876 8.8e-07 57.0 94 39.4
Gohir.A04G106066 Gossypium hirsutum HOM05D007836 ORTHO05D009876 8.8e-07 57.0 93 49.5
ClCG01G022480 Citrullus lanatus HOM05D007836 ORTHO05D009876 1.1e-06 56.6 86 44.2
FAN21G2853 Fragaria x ananassa HOM05D007836 ORTHO05D009876 1.1e-06 56.6 74 43.2
Solyc02g079240.1 Solanum lycopersicum HOM05D007836 ORTHO05D009876 1.5e-06 56.2 77 45.5
AUR62029301 Chenopodium quinoa HOM05D000831 ORTHO05D000660 2.0e-06 55.8 41 61.0
Duzib213G0288 Durio zibethinus HOM05D000831 ORTHO05D000660 2.0e-06 55.8 36 66.7
Glyma.13G301800 Glycine max HOM05D000831 ORTHO05D000660 3.3e-06 55.1 41 63.4
Duzib213G0223 Durio zibethinus HOM05D000831 ORTHO05D000660 4.4e-06 54.7 36 63.9
THA.LOC104806479 Tarenaya hassleriana HOM05D000831 ORTHO05D000660 4.4e-06 54.7 36 63.9
BcaC04g23198 Brassica carinata HOM05D000831 ORTHO05D000660 5.7e-06 54.3 41 61.0
BolC9t54010H Brassica oleracea HOM05D000831 ORTHO05D000660 5.7e-06 54.3 41 61.0
SHI24864 Sapria himalayana HOM05D007836 ORTHO05D009876 5.7e-06 54.3 81 46.9
AL1G47760 Arabidopsis lyrata HOM05D000831 ORTHO05D000660 7.4e-06 53.9 33 72.7
AL6G44110 Arabidopsis lyrata HOM05D000831 ORTHO05D000660 7.4e-06 53.9 46 63.0
AT4G10270 Arabidopsis thaliana HOM05D000831 ORTHO05D000660 7.4e-06 53.9 41 68.3
Gohir.A06G209201 Gossypium hirsutum HOM05D007836 ORTHO05D009876 7.4e-06 53.9 71 43.7
Sp6g07160 Schrenkiella parvula HOM05D000831 ORTHO05D000660 7.4e-06 53.9 41 68.3
CAN.G424.25 Capsicum annuum HOM05D007836 ORTHO05D009876 9.7e-06 53.5 81 45.7
Thhalv10009215m.g Eutrema salsugineum HOM05D000831 ORTHO05D000660 9.7e-06 53.5 36 69.4
FAN02G3937 Fragaria x ananassa HOM05D018353 ORTHO05D020702 9.7e-06 53.5 76 40.8


User provided reference genes

Program Settings