Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p034440 Quercus lobata HOM05D003773 ORTHO05D004377 4.5e-79 297.7 139 100.0
Haze_12989 Corylus avellana HOM05D003773 ORTHO05D004377 4.1e-56 221.5 131 80.2
Lj3C848T13 Lonicera japonica HOM05D003773 ORTHO05D004377 8.6e-54 213.8 125 76.0
Nitab4.5_0007004g0040 Nicotiana tabacum HOM05D003773 ORTHO05D004377 5.2e-51 204.5 139 69.1
vmacro23351 Vaccinium macrocarpon HOM05D003773 ORTHO05D004377 7.5e-50 200.7 150 64.7
vmacro03401 Vaccinium macrocarpon HOM05D003773 ORTHO05D004377 2.2e-49 199.1 150 64.0
COL.COLO4_03532 Corchorus olitorius HOM05D003773 ORTHO05D004377 1.2e-47 193.4 118 75.4
AUR62035657 Chenopodium quinoa HOM05D003773 ORTHO05D004377 6.6e-46 187.6 104 80.8
AUR62017150 Chenopodium quinoa HOM05D003773 ORTHO05D004377 1.9e-45 186.0 105 79.0
Hund25164 Selenicereus undatus HOM05D003773 ORTHO05D004377 1.9e-45 186.0 104 81.7
CiPaw.02G104400 Carya illinoinensis HOM05D003773 ORTHO05D004377 1.2e-44 183.3 93 88.2
A10p25590 Brassica napus HOM05D003773 ORTHO05D004377 1.6e-44 183.0 131 66.4
Cfa004598 Carpinus fangiana HOM05D003773 ORTHO05D004377 2.1e-44 182.6 93 89.2
BraA10t44626Z Brassica rapa HOM05D003773 ORTHO05D004377 3.6e-44 181.8 131 65.6
Sabra13G0011200 Salix brachista HOM05D003773 ORTHO05D004377 3.6e-44 181.8 124 70.2
DCAR_023465 Daucus carota HOM05D003773 ORTHO05D004377 8.0e-44 180.6 127 66.9
QL05p004180 Quercus lobata HOM05D003773 ORTHO05D004377 8.0e-44 180.6 92 89.1
CSS0007239 Camellia sinensis var. sinensis HOM05D003773 ORTHO05D004377 2.3e-43 179.1 96 84.4
Peaxi162Scf00571g00532 Petunia axillaris HOM05D003773 ORTHO05D004377 5.2e-43 177.9 109 78.0
CsaV3_7G032670 Cucumis sativus L. HOM05D003773 ORTHO05D004377 8.9e-43 177.2 92 87.0
Sc07g0000800 Simmondsia chinensis HOM05D003773 ORTHO05D004377 1.2e-42 176.8 93 86.0
Nn7g36520 Nelumbo nucifera HOM05D003773 ORTHO05D004377 1.5e-42 176.4 92 85.9
Dinv09299 Davidia involucrata HOM05D003773 ORTHO05D004377 2.0e-42 176.0 92 88.0
Duzib052G0913 Durio zibethinus HOM05D003773 ORTHO05D004377 2.0e-42 176.0 92 84.8
MELO3C023397.2 Cucumis melo HOM05D003773 ORTHO05D004377 2.6e-42 175.6 93 86.0
Glyma.08G111200 Glycine max HOM05D003773 ORTHO05D004377 3.4e-42 175.3 92 85.9
Ca_17973_v3 Cicer arietinum L. HOM05D003773 ORTHO05D004377 4.4e-42 174.9 91 84.6
TPR.G11959 Trifolium pratense HOM05D003773 ORTHO05D004377 7.5e-42 174.1 93 82.8
arahy.Tifrunner.gnm1.ann1.E2NQKT Arachis hypogaea HOM05D003773 ORTHO05D004377 9.8e-42 173.7 92 84.8
Solyc12g040810.2 Solanum lycopersicum HOM05D003773 ORTHO05D004377 9.8e-42 173.7 94 81.9
Sopen12g020600 Solanum pennellii HOM05D003773 ORTHO05D004377 9.8e-42 173.7 94 81.9
CSS0038312 Camellia sinensis var. sinensis HOM05D003773 ORTHO05D004377 1.3e-41 173.3 95 82.1
Eucgr.G02268 Eucalyptus grandis HOM05D003773 ORTHO05D004377 1.3e-41 173.3 93 82.8
PGR142G1397 Punica granatum HOM05D003773 ORTHO05D004377 1.3e-41 173.3 92 82.6
ClCG09G002660 Citrullus lanatus HOM05D003773 ORTHO05D004377 1.7e-41 172.9 149 59.1
FAN09G4222 Fragaria x ananassa HOM05D003773 ORTHO05D004377 1.7e-41 172.9 113 70.8
SHI10290 Sapria himalayana HOM05D003773 ORTHO05D004377 1.7e-41 172.9 125 64.8
GSVIVG01019372001 Vitis vinifera HOM05D003773 ORTHO05D004377 2.2e-41 172.6 92 82.6
MSTRG.22069 Avicennia marina HOM05D003773 ORTHO05D004377 2.9e-41 172.2 93 80.6
Ciclev10015999m.g Citrus clementina HOM05D003773 ORTHO05D004377 2.9e-41 172.2 94 81.9
Migut.A01113 Erythranthe guttata HOM05D003773 ORTHO05D004377 2.9e-41 172.2 93 83.9
Eucgr.K00882 Eucalyptus grandis HOM05D003773 ORTHO05D004377 3.7e-41 171.8 92 81.5
Thecc.10G119200 Theobroma cacao HOM05D003773 ORTHO05D004377 3.7e-41 171.8 92 81.5
SGA_v2.0_scaffold227G43195 Striga asiatica HOM05D003773 ORTHO05D004377 4.9e-41 171.4 93 83.9
TWI39G0383 Tripterygium wilfordii HOM05D003773 ORTHO05D004377 4.9e-41 171.4 92 82.6
Glyma.05G153500 Glycine max HOM05D003773 ORTHO05D004377 6.4e-41 171.0 91 85.7
Lalb_Chr07g0186751 Lupinus albus HOM05D003773 ORTHO05D004377 8.3e-41 170.6 90 83.3
Os08g0512300 Oryza sativa ssp. japonica HOM05D003773 ORTHO05D004377 8.3e-41 170.6 108 70.4
Sopen03g037520 Solanum pennellii HOM05D003773 ORTHO05D004377 8.3e-41 170.6 96 79.2
Zm00001eb035310 Zea mays HOM05D003773 ORTHO05D004377 1.1e-40 170.2 107 71.0
CAN.G843.44 Capsicum annuum HOM05D003773 ORTHO05D004377 1.4e-40 169.9 94 78.7
Eucgr.G02437 Eucalyptus grandis HOM05D003773 ORTHO05D004377 1.9e-40 169.5 90 83.3
Lj4g0004931 Lotus japonicus HOM05D003773 ORTHO05D004377 1.9e-40 169.5 92 83.7
VMungo0251G2733 Vigna mungo HOM05D003773 ORTHO05D004377 1.9e-40 169.5 92 82.6
Lsat_1_v5_gn_6_29461 Lactuca sativa HOM05D003773 ORTHO05D004377 2.4e-40 169.1 106 68.9
Lj4g0017678 Lotus japonicus HOM05D003773 ORTHO05D004377 2.4e-40 169.1 92 83.7
Solyc03g118570.4 Solanum lycopersicum HOM05D003773 ORTHO05D004377 2.4e-40 169.1 95 78.9
GSVIVG01000415001 Vitis vinifera HOM05D003773 ORTHO05D004377 2.4e-40 169.1 92 83.7
Medtr1g111160 Medicago truncatula HOM05D003773 ORTHO05D004377 3.2e-40 168.7 90 83.3
Cpa.g.sc50.7 Carica papaya HOM05D003773 ORTHO05D004377 4.1e-40 168.3 90 83.3
Prupe.3G223100 Prunus persica HOM05D003773 ORTHO05D004377 4.1e-40 168.3 93 82.8
TAR626G0538 Trochodendron aralioides HOM05D003773 ORTHO05D004377 4.1e-40 168.3 92 81.5
COL.COLO4_20947 Corchorus olitorius HOM05D003773 ORTHO05D004377 5.4e-40 167.9 139 56.8
Psat7g074520 Pisum sativum HOM05D003773 ORTHO05D004377 5.4e-40 167.9 92 81.5
Atru.chr7.1713 Acer truncatum HOM05D003773 ORTHO05D004377 9.2e-40 167.2 131 61.8
CDE05G0639 Ceratophyllum demersum HOM05D003773 ORTHO05D004377 9.2e-40 167.2 93 78.5
ClCG02G001540 Citrullus lanatus HOM05D003773 ORTHO05D004377 1.2e-39 166.8 88 84.1
Potri.013G012500 Populus trichocarpa HOM05D003773 ORTHO05D004377 1.2e-39 166.8 93 79.6
Phvul.002G235200 Phaseolus vulgaris HOM05D003773 ORTHO05D004377 1.6e-39 166.4 90 82.2
ATR0723G050 Amborella trichopoda HOM05D003773 ORTHO05D004377 2.0e-39 166.0 95 77.9
Eucgr.G01406 Eucalyptus grandis HOM05D003773 ORTHO05D004377 2.0e-39 166.0 93 79.6
PSO017G1854 Papaver somniferum HOM05D003773 ORTHO05D004377 2.0e-39 166.0 91 81.3
PSO339G0310 Papaver somniferum HOM05D003773 ORTHO05D004377 2.0e-39 166.0 91 81.3
TAR624G0440 Trochodendron aralioides HOM05D003773 ORTHO05D004377 2.0e-39 166.0 92 80.4
CDE02G2566 Ceratophyllum demersum HOM05D003773 ORTHO05D004377 2.7e-39 165.6 93 76.3
EL10Ac9g21128 Beta vulgaris HOM05D003773 ORTHO05D004377 6.0e-39 164.5 92 83.7
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 6.0e-39 164.5 99 75.8
MSTRG.21385 Avicennia marina HOM05D003773 ORTHO05D004377 7.8e-39 164.1 93 78.5
FvH4_6g43850 Fragaria vesca HOM05D003773 ORTHO05D004377 1.0e-38 163.7 95 78.9
Aqoxy5G00933 Aquilegia oxysepala HOM05D003773 ORTHO05D004377 1.3e-38 163.3 92 78.3
Gohir.A03G162800 Gossypium hirsutum HOM05D003773 ORTHO05D004377 2.3e-38 162.5 91 78.0
Cc04_g06080 Coffea canephora HOM05D003773 ORTHO05D004377 3.9e-38 161.8 90 77.8
FAN05G4396 Fragaria x ananassa HOM05D003773 ORTHO05D004377 3.9e-38 161.8 95 77.9
Gohir.D02G186100 Gossypium hirsutum HOM05D003773 ORTHO05D004377 3.9e-38 161.8 90 77.8
Gorai.005G208400 Gossypium raimondii HOM05D003773 ORTHO05D004377 3.9e-38 161.8 90 77.8
RhsimUnG0179500 Rhododendron simsii HOM05D003773 ORTHO05D004377 3.9e-38 161.8 90 78.9
RhsimUnG0179700 Rhododendron simsii HOM05D003773 ORTHO05D004377 3.9e-38 161.8 90 78.9
RhsimUnG0210700 Rhododendron simsii HOM05D003773 ORTHO05D004377 3.9e-38 161.8 90 78.9
RcHm_v2.0_Chr2g0160601 Rosa chinensis HOM05D003773 ORTHO05D004377 3.9e-38 161.8 93 79.6
ECA233G0965 Erigeron canadensis HOM05D003773 ORTHO05D004377 5.0e-38 161.4 97 74.2
HPP92_004888 Vanilla planifolia HOM05D003773 ORTHO05D004377 5.0e-38 161.4 109 67.9
Hma1.2p1_1650F.1_g295665 Hydrangea macrophylla HOM05D003773 ORTHO05D004377 8.6e-38 160.6 92 78.3
Actinidia31174 Actinidia chinensis HOM05D003773 ORTHO05D004377 1.1e-37 160.2 91 79.1
Aqoxy7G03759 Aquilegia oxysepala HOM05D003773 ORTHO05D004377 1.1e-37 160.2 91 79.1
FAN14G4120 Fragaria x ananassa HOM05D003773 ORTHO05D004377 1.1e-37 160.2 95 77.9
MBI02_g12519_MAGBIO Magnolia biondii HOM05D003773 ORTHO05D004377 1.5e-37 159.8 92 77.2
Manes.04G060700 Manihot esculenta HOM05D003773 ORTHO05D004377 1.5e-37 159.8 93 77.4
FvH4_7g02690 Fragaria vesca HOM05D003773 ORTHO05D004377 1.9e-37 159.5 93 79.6
FAN03G1906 Fragaria x ananassa HOM05D003773 ORTHO05D004377 1.9e-37 159.5 93 78.5
FAN06G3388 Fragaria x ananassa HOM05D003773 ORTHO05D004377 1.9e-37 159.5 93 79.6
Hma1.2p1_1872F.1_g306150 Hydrangea macrophylla HOM05D003773 ORTHO05D004377 1.9e-37 159.5 92 77.2
THA.LOC104799137 Tarenaya hassleriana HOM05D003773 ORTHO05D004377 1.9e-37 159.5 94 77.7
BcaB01g05423 Brassica carinata HOM05D003773 ORTHO05D004377 3.3e-37 158.7 124 59.7
Peaxi162Scf00314g00337 Petunia axillaris HOM05D003773 ORTHO05D004377 4.3e-37 158.3 120 60.8
Prupe.5G225800 Prunus persica HOM05D003773 ORTHO05D004377 5.6e-37 157.9 108 69.4
MD14G1230700 Malus domestica HOM05D003773 ORTHO05D004377 7.3e-37 157.5 103 72.8
Aa31LG3G15020 Aethionema arabicum HOM05D003773 ORTHO05D004377 9.5e-37 157.1 92 76.1
CANSAT11G0557 Cannabis sativa HOM05D003773 ORTHO05D004377 2.8e-36 155.6 90 76.7
Thhalv10014116m.g Eutrema salsugineum HOM05D003773 ORTHO05D004377 2.8e-36 155.6 92 75.0
C09p64680 Brassica napus HOM05D003773 ORTHO05D004377 3.6e-36 155.2 92 75.0
FAN10G4129 Fragaria x ananassa HOM05D003773 ORTHO05D004377 4.7e-36 154.8 93 76.3
SGA_v2.0_scaffold220G42596 Striga asiatica HOM05D003773 ORTHO05D004377 4.7e-36 154.8 78 88.5
BcaNung06880 Brassica carinata HOM05D003773 ORTHO05D004377 6.2e-36 154.5 92 72.8
CARHR200910 Cardamine hirsuta HOM05D003773 ORTHO05D004377 1.1e-35 153.7 90 73.3
AL6G23000 Arabidopsis lyrata HOM05D003773 ORTHO05D004377 2.3e-35 152.5 92 72.8
Hund05549 Selenicereus undatus HOM05D003773 ORTHO05D004377 6.8e-35 151.0 119 62.2
Thhalv10021168m.g Eutrema salsugineum HOM05D003773 ORTHO05D004377 8.9e-35 150.6 91 74.7
Os11g0523500 Oryza sativa ssp. japonica HOM05D003773 ORTHO05D004377 8.9e-35 150.6 106 63.2
AT5G12210 Arabidopsis thaliana HOM05D003773 ORTHO05D004377 1.5e-34 149.8 92 71.7
BolC9t59300H Brassica oleracea HOM05D003773 ORTHO05D004377 1.5e-34 149.8 93 74.2
BcaB01g05426 Brassica carinata HOM05D003773 ORTHO05D004377 2.0e-34 149.4 90 73.3
Carub.0006s1071 Capsella rubella HOM05D003773 ORTHO05D004377 2.0e-34 149.4 92 71.7
AagrBONN_evm.TU.Sc2ySwM_117.1003 Anthoceros agrestis HOM05D003773 ORTHO05D004377 2.6e-34 149.1 105 63.8
Nitab4.5_0002046g0050 Nicotiana tabacum HOM05D003773 ORTHO05D004377 9.8e-34 147.1 77 81.8
Sed0008204 Sechium edule HOM05D003773 ORTHO05D004377 9.8e-34 147.1 90 74.4
Sp3g10300 Schrenkiella parvula HOM05D003773 ORTHO05D004377 2.9e-33 145.6 89 71.9
SEGI_14663 Sequoiadendron giganteum HOM05D003773 ORTHO05D004377 2.9e-33 145.6 94 69.1
C03p06330 Brassica napus HOM05D003773 ORTHO05D004377 3.7e-33 145.2 137 54.7
BolC3t13141H Brassica oleracea HOM05D003773 ORTHO05D004377 3.7e-33 145.2 137 54.7
CBR_g17690 Chara braunii HOM05D003773 ORTHO05D004377 3.7e-33 145.2 127 50.4
Sp6g31430 Schrenkiella parvula HOM05D003773 ORTHO05D004377 6.4e-33 144.4 90 73.3
BcaB01g05420 Brassica carinata HOM05D003773 ORTHO05D004377 1.4e-32 143.3 105 61.9
Pp3c1_39910 Physcomitrium patens HOM05D003773 ORTHO05D004377 1.4e-32 143.3 98 64.3
Mapoly0074s0013 Marchantia polymorpha HOM05D003773 ORTHO05D004377 3.2e-32 142.1 90 67.8
SMO340G0057 Selaginella moellendorffii HOM05D003773 ORTHO05D004377 3.2e-32 142.1 98 62.2
Nitab4.5_0001264g0100 Nicotiana tabacum HOM05D003773 ORTHO05D004377 9.2e-32 140.6 77 79.2
MD09G1102700 Malus domestica HOM05D003773 ORTHO05D004377 2.1e-31 139.4 76 80.3
RcHm_v2.0_Chr7g0226631 Rosa chinensis HOM05D003773 ORTHO05D004377 2.1e-31 139.4 76 81.6
Pp3c14_22730 Physcomitrium patens HOM05D003773 ORTHO05D004377 6.0e-31 137.9 93 66.7
AT3G12070 Arabidopsis thaliana HOM05D003773 ORTHO05D004377 1.0e-30 137.1 90 70.0
Cfa014475 Carpinus fangiana HOM05D003773 ORTHO05D004377 1.7e-30 136.3 66 89.4
Eucgr.G01411 Eucalyptus grandis HOM05D003773 ORTHO05D004377 3.0e-30 135.6 117 53.8
Ah.12g059510 Amaranthus hybridus HOM05D003773 ORTHO05D004377 5.6e-29 131.3 117 53.0
AL3G23680 Arabidopsis lyrata HOM05D003773 ORTHO05D004377 7.3e-29 131.0 106 59.4
Prupe.2G111600 Prunus persica HOM05D003773 ORTHO05D004377 9.5e-29 130.6 108 61.1
MBI02_g15890_MAGBIO Magnolia biondii HOM05D003773 ORTHO05D004377 2.1e-28 129.4 142 51.4
RcHm_v2.0_Chr5g0048191 Rosa chinensis HOM05D003773 ORTHO05D004377 2.1e-28 129.4 66 86.4
HanXRQChr02g0056321 Helianthus annuus HOM05D003773 ORTHO05D004377 8.1e-28 127.5 76 73.7
MD06G1221400 Malus domestica HOM05D003773 ORTHO05D004377 1.4e-27 126.7 81 72.8
Eucgr.G01407 Eucalyptus grandis HOM05D003773 ORTHO05D004377 1.2e-26 123.6 95 63.2
HanXRQChr02g0051831 Helianthus annuus HOM05D003773 ORTHO05D004377 1.5e-26 123.2 67 77.6
unitig_8.g4952 Utricularia gibba HOM05D003773 ORTHO05D004377 3.4e-26 122.1 69 78.3
Nn5g31474 Nelumbo nucifera HOM05D003773 ORTHO05D004377 1.4e-24 116.7 69 78.3
Carub.0003s1141 Capsella rubella HOM05D003773 ORTHO05D004377 2.1e-23 112.8 105 54.3
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 2.1e-23 112.8 59 78.0
CSS0029091 Camellia sinensis var. sinensis HOM05D003773 ORTHO05D004377 5.1e-22 108.2 107 54.2
Haze_26189 Corylus avellana HOM05D003773 ORTHO05D004377 5.6e-21 104.8 135 35.6
Cre01.g053500 Chlamydomonas reinhardtii HOM05D003773 ORTHO05D004377 3.6e-20 102.1 95 47.4
MCO02G125 Micromonas commoda HOM05D003773 ORTHO05D004377 6.2e-20 101.3 88 52.3
MELO3C018787.2 Cucumis melo HOM05D003773 ORTHO05D004377 1.1e-19 100.5 131 42.7
PRCOL_00001116 Prasinoderma coloniale HOM05D003773 ORTHO05D004377 2.4e-19 99.4 96 46.9
AUR62041265 Chenopodium quinoa HOM05D003773 ORTHO05D004377 1.5e-18 96.7 123 43.9
Os03g0193700 Oryza sativa ssp. japonica HOM05D003773 ORTHO05D004377 1.9e-16 89.7 99 44.4
DCAR_026891 Daucus carota HOM05D003773 ORTHO05D004377 4.2e-16 88.6 47 78.7
Cfa027002 Carpinus fangiana HOM05D003773 ORTHO05D123979 7.1e-16 87.8 143 35.0
Pp3c2_3550 Physcomitrium patens HOM05D003773 ORTHO05D004377 4.6e-15 85.1 78 52.6
SEGI_16055 Sequoiadendron giganteum HOM05D003773 ORTHO05D004377 6.0e-15 84.7 62 62.9
Lj6C717T13 Lonicera japonica HOM05D003773 ORTHO05D004377 2.1e-12 76.3 68 52.9
Lj6C712G2 Lonicera japonica HOM05D003773 ORTHO05D004377 2.8e-12 75.9 42 78.6
Nn7g37010 Nelumbo nucifera HOM05D003773 ORTHO05D004377 2.0e-10 69.7 109 34.9
AagrBONN_evm.TU.Sc2ySwM_117.2022 Anthoceros agrestis HOM05D005049 ORTHO05D006032 1.0e-06 57.4 120 23.3
Mapoly0123s0027 Marchantia polymorpha HOM05D005049 ORTHO05D006032 2.3e-06 56.2 108 29.6
Aa31LG9G1340 Aethionema arabicum HOM05D005049 ORTHO05D006032 5.1e-06 55.1 108 23.1


User provided reference genes

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