Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p033312 Quercus lobata HOM05D006996 ORTHO05D008961 7.5e-48 193.4 87 100.0
PGR042G2836 Punica granatum HOM05D006996 ORTHO05D008961 9.2e-46 186.4 87 95.4
CiPaw.03G161100 Carya illinoinensis HOM05D006996 ORTHO05D008961 4.5e-45 184.1 87 92.0
Gohir.A02G139400 Gossypium hirsutum HOM05D006996 ORTHO05D008961 1.0e-44 183.0 87 92.0
Gohir.D03G050100 Gossypium hirsutum HOM05D006996 ORTHO05D008961 1.0e-44 183.0 87 92.0
Gorai.003G051600 Gossypium raimondii HOM05D006996 ORTHO05D008961 1.0e-44 183.0 87 92.0
CANSAT64G1676 Cannabis sativa HOM05D006996 ORTHO05D008961 1.3e-44 182.6 87 92.0
Prupe.3G218000 Prunus persica HOM05D006996 ORTHO05D008961 1.3e-44 182.6 87 93.1
Ciclev10017328m.g Citrus clementina HOM05D006996 ORTHO05D008961 2.9e-44 181.4 87 92.0
MD09G1069700 Malus domestica HOM05D006996 ORTHO05D008961 3.9e-44 181.0 87 92.0
MD17G1095900 Malus domestica HOM05D006996 ORTHO05D008961 3.9e-44 181.0 87 92.0
FvH4_6g43320 Fragaria vesca HOM05D006996 ORTHO05D008961 1.1e-43 179.5 87 92.0
FAN14G3455 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.1e-43 179.5 87 92.0
RcHm_v2.0_Chr2g0159651 Rosa chinensis HOM05D006996 ORTHO05D008961 1.5e-43 179.1 87 92.0
CsaV3_7G003680 Cucumis sativus L. HOM05D006996 ORTHO05D008961 1.9e-43 178.7 87 90.8
FAN05G4357 Fragaria x ananassa HOM05D006996 ORTHO05D008961 3.3e-43 177.9 87 90.8
Manes.13G070800 Manihot esculenta HOM05D006996 ORTHO05D008961 3.3e-43 177.9 87 88.5
Thecc.05G208500 Theobroma cacao HOM05D006996 ORTHO05D008961 3.3e-43 177.9 82 95.1
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 4.3e-43 177.6 88 90.9
Zm00001eb209620 Zea mays HOM05D006996 ORTHO05D008961 4.3e-43 177.6 88 90.9
Duzib128G0982 Durio zibethinus HOM05D006996 ORTHO05D008961 5.6e-43 177.2 87 88.5
Eucgr.A01713 Eucalyptus grandis HOM05D006996 ORTHO05D008961 5.6e-43 177.2 87 88.5
Cfa014416 Carpinus fangiana HOM05D006996 ORTHO05D008961 9.5e-43 176.4 87 90.8
FAN02G2509 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.6e-42 175.6 87 90.8
Dinv39702 Davidia involucrata HOM05D006996 ORTHO05D008961 2.8e-42 174.9 84 90.5
CSS0007447 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 6.1e-42 173.7 86 89.5
ClCG02G001860 Citrullus lanatus HOM05D006996 ORTHO05D008961 1.0e-41 172.9 87 87.4
Potri.018G093501 Populus trichocarpa HOM05D006996 ORTHO05D008961 1.0e-41 172.9 81 91.4
THA.LOC104800987 Tarenaya hassleriana HOM05D006996 ORTHO05D008961 1.0e-41 172.9 87 90.8
Solyc07g052420.3 Solanum lycopersicum HOM05D006996 ORTHO05D008961 1.4e-41 172.6 82 91.5
MELO3C018811.2 Cucumis melo HOM05D006996 ORTHO05D008961 1.8e-41 172.2 85 88.2
Peaxi162Scf00007g00930 Petunia axillaris HOM05D006996 ORTHO05D008961 2.3e-41 171.8 87 88.5
PGSC0003DMG400025488 Solanum tuberosum HOM05D006996 ORTHO05D008961 2.3e-41 171.8 82 90.2
Sabra18G0080400 Salix brachista HOM05D006996 ORTHO05D008961 3.1e-41 171.4 81 90.1
Sed0014620 Sechium edule HOM05D006996 ORTHO05D008961 3.1e-41 171.4 87 86.2
Dinv05447 Davidia involucrata HOM05D006996 ORTHO05D008961 5.2e-41 170.6 84 89.3
Sopen07g026050 Solanum pennellii HOM05D006996 ORTHO05D008961 5.2e-41 170.6 82 89.0
TWI18G0629 Tripterygium wilfordii HOM05D006996 ORTHO05D008961 5.2e-41 170.6 87 86.2
GSVIVG01012649001 Vitis vinifera HOM05D006996 ORTHO05D008961 5.2e-41 170.6 84 88.1
Aa31LG1G19540 Aethionema arabicum HOM05D006996 ORTHO05D008961 1.2e-40 169.5 87 87.4
CSS0016840 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.5e-40 169.1 86 86.0
Nitab4.5_0002137g0190 Nicotiana tabacum HOM05D006996 ORTHO05D008961 1.5e-40 169.1 87 87.4
Cc05_g04850 Coffea canephora HOM05D006996 ORTHO05D008961 2.0e-40 168.7 87 86.2
Lj1A759T40 Lonicera japonica HOM05D006996 ORTHO05D008961 2.0e-40 168.7 87 86.2
Lj1A760T24 Lonicera japonica HOM05D006996 ORTHO05D008961 2.0e-40 168.7 87 86.2
Ah.11g047700 Amaranthus hybridus HOM05D006996 ORTHO05D008961 2.6e-40 168.3 82 90.2
Hma1.2p1_0957F.1_g241430 Hydrangea macrophylla HOM05D006996 ORTHO05D008961 2.6e-40 168.3 84 88.1
Carub.0001s0448 Capsella rubella HOM05D006996 ORTHO05D008961 4.4e-40 167.5 87 87.4
BcaC07g42146 Brassica carinata HOM05D006996 ORTHO05D008961 5.8e-40 167.2 87 87.4
Thhalv10009219m.g Eutrema salsugineum HOM05D006996 ORTHO05D008961 5.8e-40 167.2 87 87.4
Sp1g04060 Schrenkiella parvula HOM05D006996 ORTHO05D008961 5.8e-40 167.2 87 87.4
SpUn0024_0080 Schrenkiella parvula HOM05D006996 ORTHO05D008961 5.8e-40 167.2 87 87.4
C08p51920 Brassica napus HOM05D006996 ORTHO05D008961 1.3e-39 166.0 87 86.2
BolC8t52723H Brassica oleracea HOM05D006996 ORTHO05D008961 1.3e-39 166.0 87 86.2
BraA09t42088Z Brassica rapa HOM05D006996 ORTHO05D008961 1.3e-39 166.0 87 86.2
AT1G05205 Arabidopsis thaliana HOM05D006996 ORTHO05D008961 1.7e-39 165.6 87 87.4
A10p03740 Brassica napus HOM05D006996 ORTHO05D008961 1.7e-39 165.6 87 86.2
C05p03440 Brassica napus HOM05D006996 ORTHO05D008961 1.7e-39 165.6 87 86.2
BolC5t29123H Brassica oleracea HOM05D006996 ORTHO05D008961 1.7e-39 165.6 87 86.2
BraA10t42647Z Brassica rapa HOM05D006996 ORTHO05D008961 1.7e-39 165.6 87 86.2
AL1G14970 Arabidopsis lyrata HOM05D006996 ORTHO05D008961 2.9e-39 164.9 87 86.2
Oeu027249.1 Olea europaea HOM05D006996 ORTHO05D008961 2.9e-39 164.9 87 85.1
Lsat_1_v5_gn_5_163860 Lactuca sativa HOM05D006996 ORTHO05D008961 4.9e-39 164.1 83 86.7
PSO541G2316 Papaver somniferum HOM05D006996 ORTHO05D008961 4.9e-39 164.1 84 86.9
PSO675G8615 Papaver somniferum HOM05D006996 ORTHO05D008961 4.9e-39 164.1 84 86.9
Hund01114 Selenicereus undatus HOM05D006996 ORTHO05D008961 4.9e-39 164.1 87 86.2
ECA248G0348 Erigeron canadensis HOM05D006996 ORTHO05D008961 1.9e-38 162.2 87 80.5
CDE05G0144 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 2.4e-38 161.8 85 85.9
EL10Ac5g11141 Beta vulgaris HOM05D006996 ORTHO05D008961 3.2e-38 161.4 82 85.4
Nitab4.5_0007092g0010 Nicotiana tabacum HOM05D006996 ORTHO05D008961 3.2e-38 161.4 87 86.2
HanXRQChr11g0350381 Helianthus annuus HOM05D006996 ORTHO05D008961 4.1e-38 161.0 87 83.9
TPR.G4182 Trifolium pratense HOM05D006996 ORTHO05D008961 5.4e-38 160.6 89 82.0
HPP92_011134 Vanilla planifolia HOM05D006996 ORTHO05D008961 5.4e-38 160.6 88 83.0
arahy.Tifrunner.gnm1.ann1.7T5QAW Arachis hypogaea HOM05D006996 ORTHO05D008961 7.0e-38 160.2 85 81.2
arahy.Tifrunner.gnm1.ann1.BHY6M8 Arachis hypogaea HOM05D006996 ORTHO05D008961 7.0e-38 160.2 85 81.2
arahy.Tifrunner.gnm1.ann1.MSE8LU Arachis hypogaea HOM05D006996 ORTHO05D008961 7.0e-38 160.2 85 81.2
arahy.Tifrunner.gnm1.ann1.QWF8TS Arachis hypogaea HOM05D006996 ORTHO05D008961 7.0e-38 160.2 85 81.2
MSTRG.6557 Avicennia marina HOM05D006996 ORTHO05D008961 7.0e-38 160.2 87 85.1
CDE11G0800 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 7.0e-38 160.2 87 83.9
CAN.G846.6 Capsicum annuum HOM05D006996 ORTHO05D008961 1.2e-37 159.5 82 81.7
Medtr2g088460 Medicago truncatula HOM05D006996 ORTHO05D008961 2.0e-37 158.7 82 84.1
vmacro09127 Vaccinium macrocarpon HOM05D006996 ORTHO05D008961 2.0e-37 158.7 86 80.2
CARHR004680 Cardamine hirsuta HOM05D006996 ORTHO05D008961 1.3e-36 156.0 87 81.6
Glyma.12G194300 Glycine max HOM05D006996 ORTHO05D008961 2.3e-36 155.2 84 79.8
Nn2g12174 Nelumbo nucifera HOM05D006996 ORTHO05D008961 2.3e-36 155.2 108 69.4
Actinidia30517 Actinidia chinensis HOM05D006996 ORTHO05D008961 3.9e-36 154.5 84 82.1
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 3.9e-36 154.5 83 81.9
Lj3g0015321 Lotus japonicus HOM05D006996 ORTHO05D008961 1.9e-35 152.1 81 81.5
Phvul.005G114700 Phaseolus vulgaris HOM05D006996 ORTHO05D008961 3.3e-35 151.4 82 79.3
AUR62000730 Chenopodium quinoa HOM05D006996 ORTHO05D008961 2.1e-34 148.7 86 79.1
Migut.M00413 Erythranthe guttata HOM05D006996 ORTHO05D008961 2.1e-34 148.7 87 79.3
Glyma.13G308300 Glycine max HOM05D006996 ORTHO05D008961 4.7e-34 147.5 84 76.2
AUR62021549 Chenopodium quinoa HOM05D006996 ORTHO05D008961 6.2e-34 147.1 86 77.9
unitig_21.g20728 Utricularia gibba HOM05D006996 ORTHO05D008961 1.4e-33 146.0 77 80.5
AUR62008544 Chenopodium quinoa HOM05D006996 ORTHO05D008961 5.8e-32 140.6 86 75.6
CSS0029979 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 6.4e-31 137.1 68 86.8
Lalb_Chr14g0375741 Lupinus albus HOM05D006996 ORTHO05D008961 1.9e-30 135.6 78 73.1
SalBow7G3715 Salvia bowleyana HOM05D006996 ORTHO05D008961 1.2e-29 132.9 87 72.4
TAR627G0363 Trochodendron aralioides HOM05D006996 ORTHO05D008961 2.7e-29 131.7 62 91.9
DCAR_014473 Daucus carota HOM05D006996 ORTHO05D008961 4.6e-29 131.0 65 90.8
Sc12g0002320 Simmondsia chinensis HOM05D006996 ORTHO05D008961 7.8e-29 130.2 61 90.2
Lsat_1_v5_gn_4_184120 Lactuca sativa HOM05D006996 ORTHO05D008961 1.1e-27 126.3 61 85.2
Psat5g264240 Pisum sativum HOM05D006996 ORTHO05D008961 7.3e-27 123.6 64 82.8
COL.COLO4_06384 Corchorus olitorius HOM05D006996 ORTHO05D008961 1.4e-22 109.4 49 95.9
TAR676G0001 Trochodendron aralioides HOM05D006996 ORTHO05D008961 6.6e-20 100.5 51 80.4
Mapoly0024s0016 Marchantia polymorpha HOM05D006996 ORTHO05D008961 6.2e-18 94.0 64 60.9
FAN09G4817 Fragaria x ananassa HOM05D006996 ORTHO05D008961 3.2e-14 81.6 38 94.7
MCO13G082 Micromonas commoda HOM05D006996 ORTHO05D008961 3.2e-14 81.6 58 63.8
CSS0002917 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.2e-13 79.7 40 87.5
SEGI_13346 Sequoiadendron giganteum HOM05D006996 ORTHO05D008961 2.7e-13 78.6 61 57.4
CSS0018135 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 3.0e-12 75.1 40 80.0
BcaB01g06120 Brassica carinata HOM05D006996 ORTHO05D008961 8.7e-12 73.6 42 81.0
TPR.G35081 Trifolium pratense HOM05D006996 ORTHO05D048925 3.6e-10 68.2 41 73.2


User provided reference genes

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