Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p032772 Quercus lobata HOM05D022192 ORTHO05D009908 1.8e-205 719.2 390 100.0
QL04p089735 Quercus lobata HOM05D022192 ORTHO05D009908 1.9e-114 416.8 392 67.6
QL12p009954 Quercus lobata HOM05D022192 ORTHO05D009908 4.5e-108 395.6 347 71.2
QL09p039396 Quercus lobata HOM05D022192 ORTHO05D009908 6.0e-97 358.6 184 94.6
QL10p051876 Quercus lobata HOM05D022192 ORTHO05D009908 5.1e-88 328.9 252 62.7
Hma1.2p1_0359F.1_g135000 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 3.4e-31 140.2 282 30.9
Dinv01242 Davidia involucrata HOM05D010363 ORTHO05D008693 8.3e-30 135.6 223 34.1
Rhsim01G0207900 Rhododendron simsii HOM05D012118 ORTHO05D009908 7.8e-28 129.0 297 32.0
Rhsim04G0161400 Rhododendron simsii HOM05D012118 ORTHO05D009908 2.0e-23 114.4 237 30.4
CSS0025382 Camellia sinensis var. sinensis HOM05D012118 ORTHO05D009908 6.6e-19 99.4 183 33.3
Ciclev10020105m.g Citrus clementina HOM05D002639 ORTHO05D010823 3.3e-18 97.1 254 30.3
COL.COLO4_20373 Corchorus olitorius HOM05D007993 ORTHO05D000898 2.1e-17 94.4 222 29.7
Potri.017G019466 Populus trichocarpa HOM05D000030 ORTHO05D000009 8.1e-17 92.4 301 25.9
Ciclev10031514m.g Citrus clementina HOM05D002639 ORTHO05D010823 1.1e-16 92.0 244 30.3
Lj5g0015857 Lotus japonicus HOM05D009725 ORTHO05D007788 1.1e-16 92.0 141 35.5
GSVIVG01030778001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.8e-16 91.3 162 37.0
Medtr2g022080 Medicago truncatula HOM05D009725 ORTHO05D007788 3.1e-16 90.5 233 30.5
GSVIVG01012273001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.1e-16 90.5 159 35.8
GSVIVG01005673001 Vitis vinifera HOM05D008451 ORTHO05D009908 4.0e-16 90.1 159 35.8
Medtr5g022270 Medicago truncatula HOM05D009725 ORTHO05D007788 5.2e-16 89.7 233 30.5
GSVIVG01018225001 Vitis vinifera HOM05D008451 ORTHO05D009908 5.2e-16 89.7 159 35.2
Lj2g0027504 Lotus japonicus HOM05D009725 ORTHO05D007788 8.9e-16 89.0 227 29.1
GSVIVG01010705001 Vitis vinifera HOM05D008451 ORTHO05D009908 8.9e-16 89.0 159 35.8
GSVIVG01032145001 Vitis vinifera HOM05D008451 ORTHO05D009908 8.9e-16 89.0 159 35.2
GSVIVG01037305001 Vitis vinifera HOM05D008451 ORTHO05D009908 8.9e-16 89.0 149 36.2
GSVIVG01003489001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.5e-15 88.2 165 34.5
GSVIVG01023574001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.5e-15 88.2 159 34.6
GSVIVG01030359001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.4e-15 87.0 161 36.6
GSVIVG01025899001 Vitis vinifera HOM05D008451 ORTHO05D009908 5.8e-15 86.3 161 34.8
GSVIVG01034661001 Vitis vinifera HOM05D008451 ORTHO05D009908 5.8e-15 86.3 159 34.6
GSVIVG01000313001 Vitis vinifera HOM05D008451 ORTHO05D009908 7.6e-15 85.9 159 34.0
GSVIVG01021857001 Vitis vinifera HOM05D008451 ORTHO05D009908 7.6e-15 85.9 165 33.9
FAN09G4807 Fragaria x ananassa HOM05D004096 ORTHO05D029602 9.9e-15 85.5 183 30.6
GSVIVG01038481001 Vitis vinifera HOM05D008451 ORTHO05D009908 9.9e-15 85.5 159 34.0
GSVIVG01000319001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.3e-14 85.1 149 34.9
GSVIVG01010182001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.2e-14 84.3 159 34.0
Lj4g0026673 Lotus japonicus HOM05D011457 ORTHO05D007788 2.9e-14 84.0 235 26.0
GSVIVG01001944001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.8e-14 83.6 159 34.0
GSVIVG01024189001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.8e-14 83.6 162 35.2
GSVIVG01022672001 Vitis vinifera HOM05D008451 ORTHO05D009908 6.4e-14 82.8 159 33.3
Thecc.04G055800 Theobroma cacao HOM05D008451 ORTHO05D009908 1.1e-13 82.0 192 31.8
RhsimUnG0178300 Rhododendron simsii HOM05D012118 ORTHO05D009908 1.4e-13 81.6 131 32.8
FAN16G0074 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.2e-13 80.5 251 28.7
Rhsim03G0056000 Rhododendron simsii HOM05D012118 ORTHO05D009908 4.1e-13 80.1 117 34.2
RhsimUnG0161200 Rhododendron simsii HOM05D012118 ORTHO05D009908 4.1e-13 80.1 117 34.2
Potri.017G018801 Populus trichocarpa HOM05D000455 ORTHO05D050471 7.1e-13 79.3 216 29.2
Sabra17G0002200 Salix brachista HOM05D000063 ORTHO05D050471 9.2e-13 79.0 218 29.4
MBI13_g33565_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 2.1e-12 77.8 146 35.6
arahy.Tifrunner.gnm1.ann1.RA57MB Arachis hypogaea HOM05D008645 ORTHO05D007788 3.5e-12 77.0 224 25.0
FAN05G5253 Fragaria x ananassa HOM05D010142 ORTHO05D012232 7.8e-12 75.9 206 28.2
FAN14G0448 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.0e-11 75.5 203 27.1
GSVIVG01022471001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.3e-11 75.1 132 34.8
FAN03G2350 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.7e-11 74.7 204 28.4
CANSAT64G0311 Cannabis sativa HOM05D009769 ORTHO05D010823 2.3e-11 74.3 243 25.9
GSVIVG01001707001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.3e-11 74.3 127 34.6
GSVIVG01032187001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.9e-11 73.6 128 35.2
GSVIVG01030850001 Vitis vinifera HOM05D008451 ORTHO05D009908 6.6e-11 72.8 132 35.6
FAN23G0071 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.5e-10 71.6 198 26.8
Medtr6g035170 Medicago truncatula HOM05D009725 ORTHO05D007788 1.9e-10 71.2 150 31.3
Sabra17G0002000 Salix brachista HOM05D008396 ORTHO05D018844 1.9e-10 71.2 119 31.9
Sabra17G0014800 Salix brachista HOM05D008396 ORTHO05D009908 1.9e-10 71.2 119 31.9
COL.COLO4_07542 Corchorus olitorius HOM05D030435 ORTHO05D013856 4.3e-10 70.1 178 30.3
COL.COLO4_35220 Corchorus olitorius HOM05D019362 ORTHO05D013856 5.6e-10 69.7 140 33.6
MBI06_g10167_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 9.6e-10 68.9 121 34.7
Lj4g0022736 Lotus japonicus HOM05D000045 ORTHO05D007788 1.2e-09 68.6 305 26.9
CANSAT01G0411 Cannabis sativa HOM05D009769 ORTHO05D010823 1.6e-09 68.2 227 25.1
FAN14G0071 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.1e-09 67.8 301 25.6
GSVIVG01022852001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.8e-09 67.4 128 33.6
GSVIVG01000500001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.6e-09 67.0 98 36.7
CANSAT21G2496 Cannabis sativa HOM05D009769 ORTHO05D010823 4.7e-09 66.6 245 25.7
FAN27G2741 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.7e-09 66.6 278 27.0
TPR.G37504 Trifolium pratense HOM05D009725 ORTHO05D007788 4.7e-09 66.6 137 32.1
FvH4_7g31231 Fragaria vesca HOM05D017852 ORTHO05D010823 6.2e-09 66.2 241 27.0
FAN28G1618 Fragaria x ananassa HOM05D007993 ORTHO05D000898 6.2e-09 66.2 278 26.3
MBI14_g41773_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 6.2e-09 66.2 224 28.1
FAN05G1903 Fragaria x ananassa HOM05D017852 ORTHO05D010823 8.1e-09 65.9 149 30.2
FAN08G1236 Fragaria x ananassa HOM05D007993 ORTHO05D000898 8.1e-09 65.9 248 28.2
FAN07G1300 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.1e-08 65.5 250 28.4
FAN19G1351 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.8e-08 64.7 275 26.5
Cpa.g.sc16.178 Carica papaya HOM05D002639 ORTHO05D003094 2.4e-08 64.3 174 25.3
Dinv06297 Davidia involucrata HOM05D010363 ORTHO05D008693 2.4e-08 64.3 86 38.4
FAN27G2266 Fragaria x ananassa HOM05D017852 ORTHO05D010823 4.0e-08 63.5 149 29.5
MBI14_g18539_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 4.0e-08 63.5 144 31.9
Gorai.002G028400 Gossypium raimondii HOM05D002639 ORTHO05D003094 5.2e-08 63.2 250 25.6
Lj2g0006281 Lotus japonicus HOM05D011457 ORTHO05D007788 5.2e-08 63.2 154 27.9
COL.COLO4_13861 Corchorus olitorius HOM05D002639 ORTHO05D003094 6.9e-08 62.8 171 26.3
FvH4_2g27931 Fragaria vesca HOM05D004096 ORTHO05D029602 6.9e-08 62.8 181 28.2
FAN28G1208 Fragaria x ananassa HOM05D007993 ORTHO05D000898 6.9e-08 62.8 101 39.6
Lj3g0011410 Lotus japonicus HOM05D011457 ORTHO05D007788 6.9e-08 62.8 154 27.9
MBI03_g34207_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 6.9e-08 62.8 127 33.9
Carub.0007s3326 Capsella rubella HOM05D002639 ORTHO05D003094 8.9e-08 62.4 175 27.4
FAN04G1460 Fragaria x ananassa HOM05D007993 ORTHO05D000898 8.9e-08 62.4 99 38.4
MBI10_g30246_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 8.9e-08 62.4 135 32.6
Lj6g0005229 Lotus japonicus HOM05D011457 ORTHO05D007788 1.2e-07 62.0 146 28.1
Solyc01g066830.3 Solanum lycopersicum HOM05D002639 ORTHO05D003094 1.2e-07 62.0 170 26.5
FAN18G3521 Fragaria x ananassa HOM05D011469 ORTHO05D014217 1.5e-07 61.6 131 29.8
Sopen01g028430 Solanum pennellii HOM05D002639 ORTHO05D003094 1.5e-07 61.6 170 26.5
CANSAT25G3518 Cannabis sativa HOM05D009769 ORTHO05D010823 2.0e-07 61.2 216 26.4
Medtr4g040020 Medicago truncatula HOM05D009725 ORTHO05D007788 2.0e-07 61.2 179 30.7
GSVIVG01014620001 Vitis vinifera HOM05D007651 ORTHO05D013864 2.0e-07 61.2 306 24.2
Migut.N00090 Erythranthe guttata HOM05D002639 ORTHO05D003094 2.6e-07 60.8 241 26.1
FvH4_6g28332 Fragaria vesca HOM05D017852 ORTHO05D010823 2.6e-07 60.8 149 28.9
SGA_v2.0_scaffold304G47894 Striga asiatica HOM05D008585 ORTHO05D000397 2.6e-07 60.8 206 27.7
SGA_v2.0_scaffold428G51524 Striga asiatica HOM05D002639 ORTHO05D003094 2.6e-07 60.8 172 27.3
GSVIVG01027219001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.6e-07 60.8 124 33.9
GSVIVG01027888001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.6e-07 60.8 72 45.8
FvH4_7g10251 Fragaria vesca HOM05D004096 ORTHO05D029602 3.4e-07 60.5 181 27.6
MBI17_g28664_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 3.4e-07 60.5 100 36.0
Solyc12g099530.3 Solanum lycopersicum HOM05D002639 ORTHO05D003094 3.4e-07 60.5 171 25.7
GSVIVG01036620001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.4e-07 60.5 92 42.4
MBI15_g38814_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 4.4e-07 60.1 120 34.2
Peaxi162Scf00498g00738 Petunia axillaris HOM05D002639 ORTHO05D003094 4.4e-07 60.1 174 28.7
MBI02_g32907_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 5.8e-07 59.7 109 34.9
Rhsim02G0127200 Rhododendron simsii HOM05D011344 ORTHO05D016379 5.8e-07 59.7 105 30.5
SGA_v2.0_scaffold21G09322 Striga asiatica HOM05D008585 ORTHO05D000397 5.8e-07 59.7 135 33.3
GSVIVG01030930001 Vitis vinifera HOM05D008451 ORTHO05D009908 5.8e-07 59.7 72 45.8
Dinv09951 Davidia involucrata HOM05D010363 ORTHO05D008693 7.6e-07 59.3 103 30.1
Migut.G00153 Erythranthe guttata HOM05D002639 ORTHO05D003094 7.6e-07 59.3 170 27.1
FvH4_6g07180 Fragaria vesca HOM05D011469 ORTHO05D014217 7.6e-07 59.3 105 31.4
Dinv02789 Davidia involucrata HOM05D010363 ORTHO05D008693 9.9e-07 58.9 103 30.1
FAN28G0966 Fragaria x ananassa HOM05D007993 ORTHO05D000898 9.9e-07 58.9 250 26.8
MBI05_g05140_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 9.9e-07 58.9 166 29.5
MBI13_g43748_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 9.9e-07 58.9 225 27.1
Aa31LG8G3730 Aethionema arabicum HOM05D002639 ORTHO05D003094 1.3e-06 58.5 176 27.8
BcaC07g37936 Brassica carinata HOM05D002639 ORTHO05D003094 1.3e-06 58.5 173 27.2
CANSAT78G1808 Cannabis sativa HOM05D009769 ORTHO05D010823 1.3e-06 58.5 203 23.2
Ca_21490_v3 Cicer arietinum L. HOM05D002639 ORTHO05D003094 1.3e-06 58.5 202 27.2
Dinv11999 Davidia involucrata HOM05D010363 ORTHO05D008693 1.3e-06 58.5 103 30.1
MBI17_g25957_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 1.3e-06 58.5 102 37.3
Thhalv10025061m.g Eutrema salsugineum HOM05D002639 ORTHO05D003094 1.7e-06 58.2 178 27.0
MBI15_g35153_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 1.7e-06 58.2 102 36.3
Pp3c22_12640 Physcomitrium patens HOM05D002639 ORTHO05D003094 1.7e-06 58.2 209 25.8
Sp7g14290 Schrenkiella parvula HOM05D002639 ORTHO05D003094 1.7e-06 58.2 173 26.0
SGA_v2.0_scaffold273G46471 Striga asiatica HOM05D008585 ORTHO05D000397 1.7e-06 58.2 101 35.6
FAN13G0573 Fragaria x ananassa HOM05D011469 ORTHO05D014217 2.2e-06 57.8 131 29.0
Lj6A677T76 Lonicera japonica HOM05D002639 ORTHO05D003094 2.2e-06 57.8 175 27.4
MBI07_g30494_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 2.2e-06 57.8 109 37.6
Peaxi162Scf00646g00224 Petunia axillaris HOM05D002639 ORTHO05D003094 2.2e-06 57.8 172 27.9
HPP92_013719 Vanilla planifolia HOM05D002639 ORTHO05D003094 2.2e-06 57.8 172 26.2
GSVIVG01006092001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.2e-06 57.8 62 48.4
AT4G15880 Arabidopsis thaliana HOM05D002639 ORTHO05D003094 2.9e-06 57.4 180 27.2
BraA03t14040Z Brassica rapa HOM05D002639 ORTHO05D003094 2.9e-06 57.4 173 26.6
Lalb_Chr07g0177741 Lupinus albus HOM05D002639 ORTHO05D003094 2.9e-06 57.4 190 27.4
MBI05_g01287_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 2.9e-06 57.4 94 38.3
Sc20g0001920 Simmondsia chinensis HOM05D011919 ORTHO05D014264 2.9e-06 57.4 201 22.4
THA.LOC104820271 Tarenaya hassleriana HOM05D002639 ORTHO05D003094 2.9e-06 57.4 173 26.6
BcaC06g33440 Brassica carinata HOM05D002639 ORTHO05D003094 3.8e-06 57.0 173 26.6
BolC7t45274H Brassica oleracea HOM05D002639 ORTHO05D003094 3.8e-06 57.0 173 26.6
CANSAT25G1316 Cannabis sativa HOM05D014696 ORTHO05D010823 3.8e-06 57.0 133 30.8
Dinv14202 Davidia involucrata HOM05D010363 ORTHO05D008693 3.8e-06 57.0 94 30.9
FAN13G0415 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.8e-06 57.0 150 32.0
Aa31LG5G17480 Aethionema arabicum HOM05D002639 ORTHO05D003094 4.9e-06 56.6 208 24.0
AL7G39400 Arabidopsis lyrata HOM05D002639 ORTHO05D003094 4.9e-06 56.6 175 26.9
arahy.Tifrunner.gnm1.ann1.A7DQCV Arachis hypogaea HOM05D011457 ORTHO05D007788 4.9e-06 56.6 65 38.5
ECA246G1134 Erigeron canadensis HOM05D002639 ORTHO05D003094 4.9e-06 56.6 172 27.3
Gohir.D10G170600 Gossypium hirsutum HOM05D002639 ORTHO05D003094 4.9e-06 56.6 171 24.6
BcaB04g18335 Brassica carinata HOM05D002639 ORTHO05D003094 6.4e-06 56.2 173 26.6
BcaC06g32970 Brassica carinata HOM05D002639 ORTHO05D003094 6.4e-06 56.2 173 26.6
A08p12010 Brassica napus HOM05D002639 ORTHO05D003094 6.4e-06 56.2 173 26.6
FAN24G2093 Fragaria x ananassa HOM05D004096 ORTHO05D029602 6.4e-06 56.2 145 27.6
FAN26G1459 Fragaria x ananassa HOM05D007993 ORTHO05D012371 6.4e-06 56.2 220 27.3
Gorai.011G190600 Gossypium raimondii HOM05D002639 ORTHO05D003094 6.4e-06 56.2 171 24.6
Lsat_1_v5_gn_3_24681 Lactuca sativa HOM05D002639 ORTHO05D003094 6.4e-06 56.2 171 27.5
Oeu009393.1 Olea europaea HOM05D009665 ORTHO05D011335 6.4e-06 56.2 220 24.5
QL06p009035 Quercus lobata HOM05D002639 ORTHO05D003094 6.4e-06 56.2 210 23.3
Sed0000099 Sechium edule HOM05D002639 ORTHO05D003094 6.4e-06 56.2 171 25.7
CARHR180480 Cardamine hirsuta HOM05D002639 ORTHO05D003094 8.4e-06 55.8 201 23.9
Gohir.A10G164400 Gossypium hirsutum HOM05D002639 ORTHO05D003094 8.4e-06 55.8 173 25.4
MD13G1167800 Malus domestica HOM05D002639 ORTHO05D003094 8.4e-06 55.8 170 25.9
GSVIVG01014980001 Vitis vinifera HOM05D008451 ORTHO05D009908 8.4e-06 55.8 72 44.4


User provided reference genes

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