Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 1.9e-207 725.7 389 100.0
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 4.8e-163 578.2 388 78.6
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 5.5e-151 538.1 388 72.9
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 1.6e-150 536.6 383 73.1
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 5.2e-149 531.6 393 70.7
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 3.7e-147 525.4 380 73.2
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 2.4e-146 522.7 384 70.8
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 5.0e-144 515.0 383 70.0
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 8.6e-144 514.2 383 69.7
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 9.5e-143 510.8 385 69.4
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 2.1e-142 509.6 383 70.2
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 1.5e-140 503.4 383 69.2
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 4.4e-140 501.9 385 68.3
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 1.7e-139 500.0 384 67.4
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 8.3e-139 497.7 386 68.1
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 1.6e-137 493.4 383 67.9
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 2.7e-137 492.7 431 63.6
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 2.7e-137 492.7 405 64.9
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 6.0e-137 491.5 384 66.9
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 1.0e-136 490.7 431 63.6
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 4.3e-135 485.3 387 67.2
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 2.3e-133 479.6 387 66.7
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 6.8e-133 478.0 390 68.5
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 1.5e-132 476.9 388 66.0
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 3.4e-132 475.7 356 69.4
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 1.3e-131 473.8 394 62.9
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 1.3e-131 473.8 461 58.4
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 2.2e-131 473.0 385 64.9
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 5.4e-130 468.4 389 64.8
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 7.1e-130 468.0 387 63.3
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 3.5e-129 465.7 396 62.4
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 5.1e-128 461.8 362 64.1
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 1.5e-127 460.3 383 63.4
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 2.1e-126 456.4 381 64.0
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 1.4e-125 453.8 381 63.8
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 2.0e-124 449.9 387 63.6
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 4.4e-124 448.7 388 61.9
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 8.3e-123 444.5 397 60.7
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 2.1e-121 439.9 364 63.5
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 2.7e-121 439.5 387 59.7
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 1.0e-120 437.6 385 60.8
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 1.3e-120 437.2 364 64.0
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 2.3e-120 436.4 385 63.1
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 3.9e-120 435.6 411 58.9
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 5.1e-120 435.3 390 57.2
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 8.6e-120 434.5 385 61.6
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.9e-119 433.3 368 62.5
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 1.9e-119 433.3 383 59.3
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 5.6e-119 431.8 388 59.3
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 7.3e-119 431.4 391 60.6
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 1.6e-118 430.3 337 66.5
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 1.6e-118 430.3 362 61.9
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 3.6e-118 429.1 396 61.4
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 1.1e-117 427.6 387 61.2
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 1.1e-117 427.6 330 67.9
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 1.4e-117 427.2 362 61.6
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 1.8e-117 426.8 398 59.0
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 1.8e-117 426.8 414 57.0
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 2.0e-116 423.3 314 70.1
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 4.9e-115 418.7 393 60.6
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 6.4e-115 418.3 393 59.8
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 1.4e-114 417.2 393 60.6
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 5.4e-114 415.2 393 59.3
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 2.7e-113 412.9 363 57.0
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 2.3e-112 409.8 406 58.6
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 2.3e-112 409.8 406 58.1
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 2.3e-112 409.8 383 55.9
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 2.5e-111 406.4 423 54.4
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 2.4e-106 389.8 387 57.9
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 1.6e-102 377.1 389 56.0
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 8.1e-102 374.8 365 55.1
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 3.7e-94 349.4 278 67.3
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 2.4e-93 346.7 279 67.0
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 1.6e-86 323.9 366 54.4
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 1.8e-85 320.5 279 62.0
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 7.1e-82 308.5 306 56.9
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 1.6e-78 297.4 293 55.6
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 2.6e-76 290.0 391 46.8
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 1.7e-75 287.3 226 67.3
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 6.5e-75 285.4 347 42.7
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 2.3e-72 276.9 249 60.6
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 4.1e-69 266.2 322 48.8
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 3.8e-59 233.0 388 42.5
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 3.6e-57 226.5 167 65.3
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 4.7e-57 226.1 167 72.5
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 2.6e-55 220.3 226 54.9
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 2.0e-47 194.1 350 32.6
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 3.2e-42 176.8 207 55.6
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 4.0e-40 169.9 341 31.7
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 2.9e-35 153.7 347 31.1
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 2.6e-31 140.6 132 57.6
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 4.9e-30 136.3 91 74.7
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 1.2e-28 131.7 293 32.1
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 3.4e-23 113.6 94 60.6
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 1.7e-22 111.3 71 80.3
VMungo0540G1885 Vigna mungo HOM05D007498 ORTHO05D009384 5.2e-16 89.7 66 69.7
Cfa025227 Carpinus fangiana HOM05D007498 ORTHO05D009384 2.2e-06 57.8 360 24.7


User provided reference genes

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