Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 3.2e-95 351.7 169 100.0
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 2.0e-73 279.3 159 81.1
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 6.7e-69 264.2 237 58.6
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 2.8e-67 258.8 162 74.1
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 9.1e-66 253.8 161 72.0
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 9.1e-66 253.8 161 72.0
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 2.6e-65 252.3 161 72.0
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 4.5e-65 251.5 169 69.2
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 1.7e-64 249.6 166 69.9
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 2.9e-64 248.8 167 68.3
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 3.8e-64 248.4 168 69.0
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 6.5e-64 247.7 160 71.2
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 8.5e-64 247.3 161 72.0
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 1.9e-63 246.1 159 69.8
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 9.4e-63 243.8 165 70.3
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 2.3e-61 239.2 162 69.1
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 3.9e-61 238.4 163 67.5
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 6.7e-61 237.7 163 69.3
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 6.7e-61 237.7 162 68.5
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 7.4e-60 234.2 164 67.1
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 3.7e-59 231.9 164 66.5
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 1.4e-58 229.9 160 63.8
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 3.1e-58 228.8 167 63.5
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 5.3e-58 228.0 161 66.5
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 7.0e-58 227.6 162 67.3
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 1.2e-57 226.9 151 66.9
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 1.6e-57 226.5 168 65.5
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 2.0e-57 226.1 162 64.8
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.0e-56 223.8 159 65.4
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 1.3e-56 223.4 164 65.9
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 2.9e-56 222.2 165 65.5
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.9e-55 219.5 160 61.9
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.9e-55 219.5 160 61.9
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.9e-55 219.5 160 61.9
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 2.5e-55 219.2 165 61.8
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 5.5e-55 218.0 159 64.2
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.2e-54 216.9 160 61.2
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 2.7e-54 215.7 160 63.8
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 3.6e-54 215.3 166 62.7
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 3.6e-54 215.3 138 70.3
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 3.6e-54 215.3 155 61.9
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 1.8e-53 213.0 146 69.9
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 2.3e-53 212.6 166 62.0
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 2.3e-53 212.6 169 61.5
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 4.0e-53 211.8 149 63.8
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 6.7e-53 211.1 141 68.1
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 6.7e-53 211.1 166 61.4
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 8.8e-53 210.7 166 60.8
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 1.2e-52 210.3 162 62.3
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 2.6e-52 209.1 134 71.6
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 1.7e-51 206.5 162 60.5
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 8.3e-51 204.1 151 62.3
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 1.6e-49 199.9 174 59.2
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 3.5e-49 198.7 170 60.6
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 4.5e-49 198.4 148 63.5
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 2.9e-48 195.7 150 58.7
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 3.8e-48 195.3 147 61.2
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 3.2e-47 192.2 162 54.9
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 5.5e-47 191.4 151 58.9
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 9.4e-47 190.7 156 56.4
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 1.2e-46 190.3 217 46.1
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 2.1e-46 189.5 151 57.6
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 2.1e-46 189.5 151 57.6
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 2.7e-46 189.1 151 58.3
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 6.1e-46 188.0 149 57.7
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 8.0e-46 187.6 164 55.5
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 2.3e-45 186.0 159 59.7
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 5.2e-45 184.9 147 59.9
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 3.4e-44 182.2 145 62.1
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 7.5e-44 181.0 146 55.5
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 1.3e-43 180.3 162 52.5
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.2e-43 179.5 158 55.1
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 8.3e-43 177.6 147 59.2
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 7.0e-42 174.5 141 54.6
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 2.0e-41 172.9 135 60.0
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 2.7e-41 172.6 135 60.0
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 3.5e-41 172.2 165 54.5
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 5.0e-40 168.3 142 54.9
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 8.6e-40 167.5 135 57.0
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 2.5e-39 166.0 138 54.3
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 3.3e-39 165.6 135 56.3
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 8.0e-38 161.0 129 56.6
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 4.0e-37 158.7 152 52.6
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 5.7e-36 154.8 127 59.1
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 7.5e-36 154.5 116 59.5
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 3.7e-35 152.1 98 66.3
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.2e-33 147.1 92 76.1
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 1.2e-33 147.1 148 49.3
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 1.6e-33 146.7 164 45.1
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 1.3e-32 143.7 145 51.7
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 2.3e-32 142.9 152 50.7
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 4.3e-31 138.7 91 72.5
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 4.7e-30 135.2 85 75.3
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 3.1e-29 132.5 104 64.4
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 1.2e-28 130.6 165 47.9
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 2.4e-26 122.9 91 52.7
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 2.0e-25 119.8 92 65.2
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 3.5e-25 119.0 92 59.8
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 5.6e-23 111.7 86 61.6
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 1.6e-22 110.2 75 61.3
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 2.1e-22 109.8 74 71.6
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 2.3e-21 106.3 139 41.7
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 5.2e-21 105.1 155 39.4
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 7.5e-20 101.3 68 70.6
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 2.2e-19 99.8 78 55.1
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 4.1e-18 95.5 144 34.7
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 1.5e-15 87.0 110 44.5
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 3.6e-14 82.4 60 71.7
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 2.9e-11 72.8 73 46.6
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 7.1e-10 68.2 60 60.0
MD17G1110300 Malus domestica HOM05D007186 ORTHO05D008970 2.7e-09 66.2 42 69.0


User provided reference genes

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