Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p029145 Quercus lobata HOM05D000003 ORTHO05D000004 6.3e-60 233.8 110 100.0
QL04p012310 Quercus lobata HOM05D000009 ORTHO05D000008 3.6e-31 138.3 87 71.3
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 7.1e-19 97.4 96 44.8
QL02p036374 Quercus lobata HOM05D000003 ORTHO05D000004 4.6e-18 94.7 96 45.8
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 5.1e-17 91.3 95 44.2
QL12p036057 Quercus lobata HOM05D001694 ORTHO05D000248 5.1e-17 91.3 96 40.6
QL10p036891 Quercus lobata HOM05D000003 ORTHO05D000004 4.3e-16 88.2 94 44.7
QL09p039085 Quercus lobata HOM05D000003 ORTHO05D000004 9.6e-16 87.0 91 51.6
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 5.2e-14 81.3 94 38.3
QL03p045098 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-13 79.7 94 38.3
QL02p011750 Quercus lobata HOM05D000003 ORTHO05D000004 3.4e-13 78.6 88 40.9
QL06p025841 Quercus lobata HOM05D000003 ORTHO05D000004 6.4e-12 74.3 79 44.3
QL05p056014 Quercus lobata HOM05D000003 ORTHO05D018096 1.1e-11 73.6 89 36.0
Lj4P628T36 Lonicera japonica HOM05D000003 ORTHO05D000004 1.4e-11 73.2 93 36.6
CiPaw.15G051200 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.4e-11 72.4 98 37.8
QL03p037453 Quercus lobata HOM05D000003 ORTHO05D000004 3.2e-11 72.0 75 45.3
Atru.chr5.1622 Acer truncatum HOM05D000003 ORTHO05D000004 5.4e-11 71.2 93 38.7
QL08p047630 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-10 70.1 95 34.7
QL09p000395 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-10 69.3 96 37.5
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 2.7e-10 68.9 98 39.8
BcaB02g10660 Brassica carinata HOM05D000003 ORTHO05D000004 1.3e-09 66.6 96 35.4
Atru.chr6.887 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-09 66.2 93 34.4
Atru.chr12.386 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-09 65.9 94 33.0
Atru.chr4.2116 Acer truncatum HOM05D000003 ORTHO05D000004 3.0e-09 65.5 93 35.5
Lj5P70T45 Lonicera japonica HOM05D000003 ORTHO05D000004 3.0e-09 65.5 94 36.2
TPR.G6981 Trifolium pratense HOM05D000003 ORTHO05D000004 3.0e-09 65.5 75 38.7
Atru.chr2.108 Acer truncatum HOM05D000003 ORTHO05D000004 3.9e-09 65.1 81 37.0
Atru.chr3.2627 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-09 64.7 94 33.0
Aa31LG11G6920 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.7e-09 63.9 52 48.1
CiPaw.11G073400 Carya illinoinensis HOM05D000003 ORTHO05D000004 8.7e-09 63.9 63 39.7
QL02p087863 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-08 63.5 97 38.1
QL02p055170 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-08 63.2 48 56.2
TPR.G7198 Trifolium pratense HOM05D000003 ORTHO05D000004 1.5e-08 63.2 96 34.4
COL.COLO4_07023 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.9e-08 62.8 85 34.1
Lj2g0023446 Lotus japonicus HOM05D000003 ORTHO05D000004 1.9e-08 62.8 66 43.9
PSO541G5943 Papaver somniferum HOM05D000003 ORTHO05D001026 1.9e-08 62.8 71 38.0
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 2.5e-08 62.4 58 48.3
QL04p035049 Quercus lobata HOM05D000003 ORTHO05D000126 2.5e-08 62.4 104 32.7
QL09p010362 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-08 62.4 71 38.0
RcHm_v2.0_Chr6g0286611 Rosa chinensis HOM05D000003 ORTHO05D006737 2.5e-08 62.4 99 31.3
CiPaw.05G068400 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.3e-08 62.0 95 31.6
CiPaw.10G104200 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.3e-08 62.0 96 34.4
COL.COLO4_15583 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.3e-08 62.0 85 34.1
FvH4_4g01552 Fragaria vesca HOM05D000003 ORTHO05D006737 3.3e-08 62.0 84 39.3
QL04p035160 Quercus lobata HOM05D000003 ORTHO05D000126 3.3e-08 62.0 107 31.8
QL06p032808 Quercus lobata HOM05D000003 ORTHO05D000167 3.3e-08 62.0 46 56.5
TWI32G0745 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.3e-08 62.0 96 35.4
Atru.chr4.50 Acer truncatum HOM05D000003 ORTHO05D000004 4.3e-08 61.6 95 34.7
CiPaw.07G081700 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.3e-08 61.6 90 34.4
PSO170G2312 Papaver somniferum HOM05D000003 ORTHO05D001026 4.3e-08 61.6 72 36.1
Atru.chr11.920 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-08 61.2 92 34.8
Lj4g0023123 Lotus japonicus HOM05D000003 ORTHO05D000004 5.6e-08 61.2 80 35.0
QL04p069324 Quercus lobata HOM05D000003 ORTHO05D000004 5.6e-08 61.2 70 42.9
Atru.chr2.2006 Acer truncatum HOM05D000003 ORTHO05D000004 7.3e-08 60.8 91 30.8
TPR.G36801 Trifolium pratense HOM05D000003 ORTHO05D000004 7.3e-08 60.8 95 32.6
BcaC07g38152 Brassica carinata HOM05D000003 ORTHO05D000004 9.6e-08 60.5 89 33.7
QL02p092465 Quercus lobata HOM05D000003 ORTHO05D016463 9.6e-08 60.5 76 42.1
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 9.6e-08 60.5 97 35.1
Atru.chr6.266 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-07 60.1 99 33.3
QL04p086248 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-07 60.1 78 32.1
BcaB01g00937 Brassica carinata HOM05D000003 ORTHO05D000004 1.6e-07 59.7 94 30.9
AUR62009595 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.6e-07 59.7 64 45.3
COL.COLO4_14554 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.6e-07 59.7 76 35.5
COL.COLO4_28522 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.6e-07 59.7 93 29.0
FvH4_3g20371 Fragaria vesca HOM05D000003 ORTHO05D000004 1.6e-07 59.7 99 34.3
COL.COLO4_20252 Corchorus olitorius HOM05D000003 ORTHO05D007254 2.1e-07 59.3 71 36.6
QL08p031025 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-07 59.3 95 35.8
QL10p043689 Quercus lobata HOM05D054667 ORTHO05D001197 2.1e-07 59.3 71 38.0
QL10p047204 Quercus lobata HOM05D054667 ORTHO05D000126 2.1e-07 59.3 71 38.0
BcaC01g03112 Brassica carinata HOM05D000003 ORTHO05D004851 2.8e-07 58.9 93 29.0
FvH4_5g33581 Fragaria vesca HOM05D008133 ORTHO05D009449 2.8e-07 58.9 76 31.6
Lj4P253T33 Lonicera japonica HOM05D000003 ORTHO05D000004 2.8e-07 58.9 94 30.9
Rhsim05G0074900 Rhododendron simsii HOM05D000542 ORTHO05D000202 2.8e-07 58.9 89 32.6
Rhsim06G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.8e-07 58.9 86 34.9
TWI75G0193 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.8e-07 58.9 95 33.7
CANSAT11G1229 Cannabis sativa HOM05D000003 ORTHO05D000004 3.6e-07 58.5 97 30.9
AUR62018311 Chenopodium quinoa HOM05D000003 ORTHO05D000004 3.6e-07 58.5 94 34.0
Gohir.A03G054250 Gossypium hirsutum HOM05D013318 ORTHO05D012297 3.6e-07 58.5 87 39.1
QL03p040497 Quercus lobata HOM05D000003 ORTHO05D000004 3.6e-07 58.5 72 38.9
QL05p047317 Quercus lobata HOM05D000003 ORTHO05D000004 3.6e-07 58.5 68 38.2
Thecc.04G005800 Theobroma cacao HOM05D000003 ORTHO05D000004 3.6e-07 58.5 94 36.2
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 4.8e-07 58.2 63 44.4
Atru.chr5.1666 Acer truncatum HOM05D000003 ORTHO05D000004 4.8e-07 58.2 76 36.8
BcaC01g02706 Brassica carinata HOM05D000003 ORTHO05D000004 4.8e-07 58.2 91 28.6
FvH4_2g04611 Fragaria vesca HOM05D000003 ORTHO05D000004 4.8e-07 58.2 65 40.0
Atru.chr7.811 Acer truncatum HOM05D000003 ORTHO05D000004 6.2e-07 57.8 92 31.5
COL.COLO4_05846 Corchorus olitorius HOM05D014433 ORTHO05D000110 6.2e-07 57.8 96 31.2
FvH4_5g12241 Fragaria vesca HOM05D000003 ORTHO05D000004 6.2e-07 57.8 64 39.1
QL03p040865 Quercus lobata HOM05D000003 ORTHO05D000004 6.2e-07 57.8 72 38.9
QL04p048956 Quercus lobata HOM05D000003 ORTHO05D000167 6.2e-07 57.8 73 32.9
QL04p073918 Quercus lobata HOM05D000003 ORTHO05D000004 6.2e-07 57.8 76 38.2
QL05p065428 Quercus lobata HOM05D000003 ORTHO05D000004 6.2e-07 57.8 94 33.0
Atru.chr2.931 Acer truncatum HOM05D000003 ORTHO05D000004 8.1e-07 57.4 60 38.3
AUR62038322 Chenopodium quinoa HOM05D000577 ORTHO05D001093 8.1e-07 57.4 96 31.2
QL01p027638 Quercus lobata HOM05D000003 ORTHO05D000167 8.1e-07 57.4 78 30.8
QL03p043669 Quercus lobata HOM05D000003 ORTHO05D000167 8.1e-07 57.4 86 36.0
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 8.1e-07 57.4 89 37.1
Atru.chr5.2450 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 57.0 95 31.6
AUR62030098 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.1e-06 57.0 64 45.3
QL01p022268 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-06 57.0 73 38.4
QL07p039728 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-06 57.0 78 37.2
QL08p018981 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-06 57.0 62 46.8
Rhsim01G0072400 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.1e-06 57.0 60 41.7
CANSAT25G2465 Cannabis sativa HOM05D000003 ORTHO05D000167 1.4e-06 56.6 99 30.3
FvH4_3g32552 Fragaria vesca HOM05D000003 ORTHO05D006737 1.4e-06 56.6 98 30.6
Hma1.2p1_0120F.1_g057190 Hydrangea macrophylla HOM05D000003 ORTHO05D000004 1.4e-06 56.6 87 34.5
QL04p061584 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-06 56.6 72 40.3
TPR.G32297 Trifolium pratense HOM05D000003 ORTHO05D000004 1.4e-06 56.6 89 31.5
Atru.chr10.527 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-06 56.2 95 31.6
Atru.chr13.1582 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-06 56.2 64 39.1
Atru.chr5.1598 Acer truncatum HOM05D000856 ORTHO05D000167 1.8e-06 56.2 63 38.1
EL10Ac6g15351 Beta vulgaris HOM05D004240 ORTHO05D005082 1.8e-06 56.2 97 35.1
BraA02t07760Z Brassica rapa HOM05D000003 ORTHO05D001091 1.8e-06 56.2 63 39.7
CiPaw.03G206600 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.8e-06 56.2 88 34.1
PSO210G3048 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-06 56.2 77 36.4
QL06p041766 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-06 56.2 92 34.8
QL11p033599 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-06 56.2 94 34.0
TAR121G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.8e-06 56.2 95 32.6
Atru.chr2.2135 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-06 55.8 81 35.8
Atru.chr4.1426 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-06 55.8 84 33.3
EL10Ac8g19714 Beta vulgaris HOM05D000003 ORTHO05D000126 2.4e-06 55.8 76 36.8
PSO782G2124 Papaver somniferum HOM05D000003 ORTHO05D001026 2.4e-06 55.8 90 33.3
Atru.chr13.1818 Acer truncatum HOM05D000003 ORTHO05D000004 3.1e-06 55.5 98 31.6
Atru.chr9.1114 Acer truncatum HOM05D000003 ORTHO05D000004 3.1e-06 55.5 56 35.7
CANSAT01G1250 Cannabis sativa HOM05D000003 ORTHO05D000167 3.1e-06 55.5 92 27.2
CANSAT91G0002 Cannabis sativa HOM05D000003 ORTHO05D000004 3.1e-06 55.5 67 37.3
COL.COLO4_04272 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.1e-06 55.5 95 29.5
PSO063G0448 Papaver somniferum HOM05D000003 ORTHO05D000006 3.1e-06 55.5 67 35.8
PSO339G5018 Papaver somniferum HOM05D000003 ORTHO05D000004 3.1e-06 55.5 77 35.1
TWI23G0529 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.1e-06 55.5 95 33.7
Aa31sc85G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.0e-06 55.1 84 34.5
FvH4_3g26221 Fragaria vesca HOM05D000003 ORTHO05D000004 4.0e-06 55.1 61 37.7
PSO210G5459 Papaver somniferum HOM05D000003 ORTHO05D000004 4.0e-06 55.1 77 35.1
PSO339G3052 Papaver somniferum HOM05D000003 ORTHO05D000004 4.0e-06 55.1 77 35.1
QL06p005642 Quercus lobata HOM05D000003 ORTHO05D000004 4.0e-06 55.1 63 34.9
QL09p014828 Quercus lobata HOM05D000003 ORTHO05D000004 4.0e-06 55.1 59 42.4
RcHm_v2.0_Chr1g0340391 Rosa chinensis HOM05D000003 ORTHO05D000004 4.0e-06 55.1 69 34.8
TAR256G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 4.0e-06 55.1 96 35.4
Atru.chr11.1421 Acer truncatum HOM05D000003 ORTHO05D000004 5.3e-06 54.7 80 33.8
Atru.chr4.1214 Acer truncatum HOM05D000003 ORTHO05D000167 5.3e-06 54.7 49 40.8
Aa31LG2G12260 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.3e-06 54.7 98 30.6
Cpa.g.c37080 Carica papaya HOM05D015597 ORTHO05D020338 5.3e-06 54.7 79 31.6
CiPaw.14G079800 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.3e-06 54.7 63 34.9
AUR62018461 Chenopodium quinoa HOM05D000003 ORTHO05D000004 5.3e-06 54.7 97 34.0
RcHm_v2.0_Chr7g0182091 Rosa chinensis HOM05D000003 ORTHO05D000004 5.3e-06 54.7 82 36.6
TPR.G29120 Trifolium pratense HOM05D000003 ORTHO05D000004 5.3e-06 54.7 82 31.7
vmacro00928 Vaccinium macrocarpon HOM05D000042 ORTHO05D008481 5.3e-06 54.7 60 41.7
Atru.chr6.710 Acer truncatum HOM05D000003 ORTHO05D000004 6.9e-06 54.3 49 46.9
FvH4_5g31282 Fragaria vesca HOM05D000003 ORTHO05D000004 6.9e-06 54.3 96 29.2
PSO675G5869 Papaver somniferum HOM05D000003 ORTHO05D000004 6.9e-06 54.3 92 35.9
QL11p016914 Quercus lobata HOM05D008417 ORTHO05D010741 6.9e-06 54.3 106 27.4
Thecc.02G206100 Theobroma cacao HOM05D000003 ORTHO05D000004 6.9e-06 54.3 67 40.3
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 6.9e-06 54.3 62 35.5
Atru.chr1.2765 Acer truncatum HOM05D000003 ORTHO05D000004 9.0e-06 53.9 82 31.7
Atru.chr12.2514 Acer truncatum HOM05D000003 ORTHO05D000004 9.0e-06 53.9 53 41.5
Atru.chr6.65 Acer truncatum HOM05D000003 ORTHO05D000004 9.0e-06 53.9 64 35.9
Atru.chr6.785 Acer truncatum HOM05D000003 ORTHO05D000004 9.0e-06 53.9 83 31.3
Atru.chr8.816 Acer truncatum HOM05D000003 ORTHO05D000004 9.0e-06 53.9 49 46.9
Ah.11g041700 Amaranthus hybridus HOM05D000003 ORTHO05D016463 9.0e-06 53.9 62 37.1
EL10Ac8g19710 Beta vulgaris HOM05D000003 ORTHO05D000004 9.0e-06 53.9 97 33.0
CiPaw.01G080900 Carya illinoinensis HOM05D000003 ORTHO05D000004 9.0e-06 53.9 89 25.8
CiPaw.14G093100 Carya illinoinensis HOM05D000003 ORTHO05D000004 9.0e-06 53.9 71 35.2
COL.COLO4_27602 Corchorus olitorius HOM05D013144 ORTHO05D009449 9.0e-06 53.9 65 41.5
FvH4_5g04240 Fragaria vesca HOM05D000003 ORTHO05D000004 9.0e-06 53.9 64 39.1
Lj5g0017569 Lotus japonicus HOM05D000003 ORTHO05D007254 9.0e-06 53.9 85 30.6
Nn4g22089 Nelumbo nucifera HOM05D000003 ORTHO05D000004 9.0e-06 53.9 80 35.0
RcHm_v2.0_Chr5g0012551 Rosa chinensis HOM05D000003 ORTHO05D000004 9.0e-06 53.9 49 42.9


User provided reference genes

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