Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 1.1e-107 393.3 198 100.0
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 1.8e-89 332.8 197 83.2
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 4.2e-86 321.6 196 80.6
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 7.1e-86 320.9 193 80.8
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 2.1e-85 319.3 196 80.1
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 1.0e-84 317.0 196 80.1
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 3.9e-84 315.1 193 79.8
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 6.6e-84 314.3 196 79.1
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.9e-83 312.8 194 78.9
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 2.5e-83 312.4 192 79.2
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 7.3e-83 310.8 192 78.6
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 7.3e-83 310.8 343 54.8
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 9.6e-83 310.5 198 79.8
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 3.6e-82 308.5 192 78.6
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 1.4e-81 306.6 193 78.2
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 1.8e-81 306.2 193 78.8
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 2.4e-81 305.8 193 77.7
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 4.0e-81 305.1 193 77.2
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 6.9e-81 304.3 193 77.2
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 1.2e-80 303.5 196 75.0
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 4.4e-80 301.6 189 77.2
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 5.8e-80 301.2 194 76.3
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 1.3e-79 300.1 192 76.0
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 1.7e-79 299.7 196 75.5
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 2.2e-79 299.3 187 78.6
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 3.8e-79 298.5 197 75.6
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 1.9e-78 296.2 193 74.1
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 2.4e-78 295.8 194 74.7
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 2.4e-78 295.8 192 78.6
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 2.4e-78 295.8 192 74.5
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 1.2e-77 293.5 194 72.2
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 1.6e-77 293.1 192 75.0
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 2.7e-77 292.4 195 71.8
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 4.6e-77 291.6 184 77.2
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 7.9e-77 290.8 195 71.3
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 1.3e-76 290.0 194 72.7
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 1.3e-76 290.0 191 75.9
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 3.0e-76 288.9 194 71.6
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 2.5e-75 285.8 193 70.5
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 4.3e-75 285.0 192 71.4
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 4.3e-75 285.0 192 68.8
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 1.6e-74 283.1 193 71.0
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 2.1e-74 282.7 178 75.8
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 2.1e-74 282.7 194 70.6
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 2.8e-74 282.3 194 70.1
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 3.6e-74 282.0 197 68.5
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 4.8e-74 281.6 195 69.2
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 6.2e-74 281.2 196 68.4
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 8.1e-74 280.8 193 72.0
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 1.1e-73 280.4 196 68.9
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.4e-73 280.0 197 69.5
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 1.4e-73 280.0 193 68.9
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 1.4e-73 280.0 193 69.4
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 1.8e-73 279.6 192 71.9
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 3.1e-73 278.9 193 69.4
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 4.0e-73 278.5 174 79.3
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 9.0e-73 277.3 195 70.8
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 2.6e-72 275.8 193 68.4
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 3.4e-72 275.4 193 67.4
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 3.8e-71 271.9 193 68.4
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 1.1e-70 270.4 195 68.2
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 1.1e-70 270.4 197 70.1
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 9.3e-70 267.3 170 75.3
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 1.2e-69 266.9 187 70.1
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 2.7e-69 265.8 195 67.2
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 4.6e-69 265.0 193 68.4
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.3e-68 263.5 202 69.3
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 2.3e-68 262.7 185 72.4
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 8.7e-68 260.8 169 76.9
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 3.3e-67 258.8 187 69.5
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 2.8e-66 255.8 179 69.8
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 3.7e-66 255.4 266 54.1
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.5e-64 250.0 254 52.8
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 2.0e-64 249.6 174 69.5
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 5.8e-64 248.1 148 80.4
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 1.4e-62 243.4 154 74.0
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 1.9e-59 233.0 193 63.7
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 2.5e-59 232.6 321 42.4
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 2.5e-59 232.6 321 42.4
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 5.7e-59 231.5 170 70.0
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 5.7e-59 231.5 176 65.3
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 9.6e-59 230.7 143 76.9
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 2.9e-55 219.2 196 59.7
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 1.4e-54 216.9 168 64.9
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 1.9e-54 216.5 150 68.7
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 6.7e-52 208.0 137 75.9
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 2.2e-50 203.0 136 72.1
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 4.8e-50 201.8 135 72.6
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 3.1e-49 199.1 172 56.4
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 5.9e-48 194.9 194 55.2
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 1.7e-47 193.4 138 71.7
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 3.9e-44 182.2 170 52.9
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 4.8e-42 175.3 121 68.6
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 1.8e-41 173.3 110 72.7
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 9.1e-41 171.0 234 48.7
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 6.7e-36 154.8 171 48.5
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 6.5e-31 138.3 283 33.6
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 4.7e-29 132.1 113 61.1
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 1.0e-28 131.0 87 74.7
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.4e-28 130.6 84 79.8
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 1.5e-27 127.1 84 66.7
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 1.6e-21 107.1 71 74.6
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 7.5e-19 98.2 129 44.2
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 2.4e-17 93.2 111 48.6
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 8.5e-15 84.7 55 70.9
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 2.3e-12 76.6 164 32.3
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 2.0e-11 73.6 112 42.9
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 3.7e-10 69.3 49 69.4
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.4e-09 67.4 41 68.3
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.1e-09 66.2 34 82.4


User provided reference genes

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