Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 1.1e-60 236.5 125 100.0
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 8.9e-34 147.1 125 63.2
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 1.3e-32 143.3 125 60.8
CiPaw.03G278900 Carya illinoinensis HOM05D004793 ORTHO05D004423 3.5e-30 135.2 127 68.5
Hma1.2p1_0133F.1_g061430 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 7.3e-28 127.5 125 55.2
Hma1.2p1_1825F.1_g304390 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 7.3e-28 127.5 125 55.2
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 9.5e-28 127.1 125 56.0
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 2.3e-26 122.5 133 57.9
Ciclev10017917m.g Citrus clementina HOM05D004793 ORTHO05D004423 7.5e-25 117.5 128 55.5
Prupe.3G201300 Prunus persica HOM05D004793 ORTHO05D004423 3.7e-24 115.2 132 54.5
COL.COLO4_08493 Corchorus olitorius HOM05D004793 ORTHO05D004423 4.9e-24 114.8 127 59.1
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 1.9e-23 112.8 125 49.6
Gohir.D07G197000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 4.6e-22 108.2 126 53.2
Gorai.001G220800 Gossypium raimondii HOM05D004793 ORTHO05D004423 4.6e-22 108.2 126 53.2
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 4.6e-22 108.2 126 50.8
RcHm_v2.0_Chr2g0156651 Rosa chinensis HOM05D004793 ORTHO05D004423 4.6e-22 108.2 129 53.5
CSS0020838 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 6.0e-22 107.8 126 51.6
CSS0047668 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 6.0e-22 107.8 126 51.6
Sabra14G0125700 Salix brachista HOM05D004793 ORTHO05D004423 6.0e-22 107.8 138 54.3
Gohir.A07G190700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 7.8e-22 107.5 126 53.2
Cpa.g.sc211.5 Carica papaya HOM05D004793 ORTHO05D004423 1.0e-21 107.1 137 52.6
FAN14G5076 Fragaria x ananassa HOM05D004793 ORTHO05D004423 1.7e-21 106.3 129 52.7
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 2.3e-21 105.9 129 55.8
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 2.3e-21 105.9 125 46.4
FvH4_6g41090 Fragaria vesca HOM05D004793 ORTHO05D004423 3.0e-21 105.5 129 52.7
Potri.014G165000 Populus trichocarpa HOM05D004793 ORTHO05D004423 8.6e-21 104.0 140 54.3
TPR.G1320 Trifolium pratense HOM05D004793 ORTHO05D004423 1.1e-20 103.6 126 53.2
Manes.13G062900 Manihot esculenta HOM05D004793 ORTHO05D004423 2.5e-20 102.4 128 53.1
Medtr5g097300 Medicago truncatula HOM05D004793 ORTHO05D004423 2.5e-20 102.4 125 54.4
Glyma.14G007800 Glycine max HOM05D004793 ORTHO05D004423 3.3e-20 102.1 130 54.6
LjContig00081g0018270 Lotus japonicus HOM05D004793 ORTHO05D004423 5.6e-20 101.3 131 51.9
Glyma.02G305500 Glycine max HOM05D004793 ORTHO05D004423 3.6e-19 98.6 131 51.9
Sed0008787 Sechium edule HOM05D004793 ORTHO05D004423 4.0e-18 95.1 131 47.3
TWI36G0659 Tripterygium wilfordii HOM05D004793 ORTHO05D004423 8.9e-18 94.0 130 49.2
Ca_06456_v3 Cicer arietinum L. HOM05D004793 ORTHO05D004423 7.5e-17 90.9 128 50.0
Haze_12687 Corylus avellana HOM05D004793 ORTHO05D004423 9.8e-17 90.5 136 47.8
VMungo0647G0475 Vigna mungo HOM05D004793 ORTHO05D004423 3.7e-16 88.6 136 49.3
Thecc.07G019600 Theobroma cacao HOM05D004793 ORTHO05D004423 8.3e-16 87.4 125 44.8
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.1e-15 87.0 125 42.4
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 4.1e-15 85.1 128 41.4
CiPaw.12G136200 Carya illinoinensis HOM05D004793 ORTHO05D004423 4.1e-15 85.1 126 44.4
Psat2g004520 Pisum sativum HOM05D004793 ORTHO05D004423 5.4e-15 84.7 130 51.5
Haze_09795 Corylus avellana HOM05D004793 ORTHO05D004423 7.0e-15 84.3 125 42.4
Cfa020226 Carpinus fangiana HOM05D004793 ORTHO05D004423 1.6e-14 83.2 125 40.8
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 1.6e-14 83.2 126 39.7
CiPaw.11G201300 Carya illinoinensis HOM05D004793 ORTHO05D004423 6.0e-14 81.3 126 42.1
Rhsim04G0014600 Rhododendron simsii HOM05D004793 ORTHO05D004423 6.0e-14 81.3 128 46.1
Phvul.008G285200 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 7.8e-14 80.9 126 46.8
Duzib170G0463 Durio zibethinus HOM05D004793 ORTHO05D004423 1.0e-13 80.5 125 42.4
Duzib170G0743 Durio zibethinus HOM05D004793 ORTHO05D004423 1.0e-13 80.5 125 42.4
Eucgr.K00650 Eucalyptus grandis HOM05D004793 ORTHO05D004423 3.0e-13 79.0 133 43.6
Manes.15G062700 Manihot esculenta HOM05D004793 ORTHO05D004423 3.9e-13 78.6 125 39.2
MELO3C024110.2 Cucumis melo HOM05D004793 ORTHO05D004423 5.1e-13 78.2 132 44.7
Potri.011G086300 Populus trichocarpa HOM05D004793 ORTHO05D004423 6.6e-13 77.8 99 45.5
PGR142G2586 Punica granatum HOM05D004793 ORTHO05D004423 8.6e-13 77.4 129 49.6
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 1.1e-12 77.0 135 39.3
GSVIVG01002881001 Vitis vinifera HOM05D000222 ORTHO05D003997 1.1e-12 77.0 131 41.2
Cfa000070 Carpinus fangiana HOM05D004793 ORTHO05D004423 1.9e-12 76.3 128 39.8
Gohir.D01G074100 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.5e-12 75.9 125 43.2
Lsat_1_v5_gn_5_121620 Lactuca sativa HOM05D004793 ORTHO05D004423 3.3e-12 75.5 112 46.4
Prupe.4G234900 Prunus persica HOM05D004793 ORTHO05D004423 3.3e-12 75.5 139 40.3
Cpa.g.sc2750.2 Carica papaya HOM05D004793 ORTHO05D004423 4.3e-12 75.1 133 42.9
Sabra16G0013200 Salix brachista HOM05D004793 ORTHO05D004423 4.3e-12 75.1 134 40.3
Gohir.A01G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 7.3e-12 74.3 125 43.2
ECA234G3783 Erigeron canadensis HOM05D004793 ORTHO05D004423 3.6e-11 72.0 149 37.6
Aqoxy1G04226 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 4.7e-11 71.6 131 42.0
Lalb_Chr04g0247291 Lupinus albus HOM05D004793 ORTHO05D004423 4.7e-11 71.6 126 45.2
Lalb_Chr04g0247481 Lupinus albus HOM05D004793 ORTHO05D004423 4.7e-11 71.6 126 45.2
ClCG02G002720 Citrullus lanatus HOM05D000222 ORTHO05D003997 8.1e-11 70.9 115 45.2
Gohir.D13G138400 Gossypium hirsutum HOM05D004793 ORTHO05D004423 8.1e-11 70.9 125 42.4
Gorai.013G155000 Gossypium raimondii HOM05D004793 ORTHO05D004423 8.1e-11 70.9 125 42.4
CsaV3_7G018540 Cucumis sativus L. HOM05D004793 ORTHO05D004423 1.8e-10 69.7 125 37.6
Eucgr.A01045 Eucalyptus grandis HOM05D004793 ORTHO05D004423 1.8e-10 69.7 135 41.5
ClCG09G021090 Citrullus lanatus HOM05D004793 ORTHO05D004423 3.1e-10 68.9 125 37.6
DCAR_019706 Daucus carota HOM05D004793 ORTHO05D004423 3.1e-10 68.9 137 38.0
FAN21G3338 Fragaria x ananassa HOM05D017646 ORTHO05D004423 3.1e-10 68.9 136 44.9
Sed0007585 Sechium edule HOM05D004793 ORTHO05D004423 3.1e-10 68.9 125 37.6
Gohir.A07G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 4.0e-10 68.6 128 44.5
FvH4_3g24120 Fragaria vesca HOM05D017646 ORTHO05D004423 5.2e-10 68.2 136 44.1
FAN11G0385 Fragaria x ananassa HOM05D017646 ORTHO05D004423 5.2e-10 68.2 136 44.1
Sabra06G0011800 Salix brachista HOM05D004793 ORTHO05D004423 5.2e-10 68.2 137 38.7
Prupe.4G007200 Prunus persica HOM05D004793 ORTHO05D004423 6.8e-10 67.8 160 37.5
Potri.016G009200 Populus trichocarpa HOM05D004793 ORTHO05D004423 8.9e-10 67.4 137 40.9
CSS0013569 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 1.5e-09 66.6 127 43.3
FAN16G3200 Fragaria x ananassa HOM05D017646 ORTHO05D004423 1.5e-09 66.6 133 45.9
FAN25G0781 Fragaria x ananassa HOM05D017646 ORTHO05D004423 1.5e-09 66.6 136 43.4
FAN25G3449 Fragaria x ananassa HOM05D017646 ORTHO05D004423 1.5e-09 66.6 136 43.4
Thecc.06G236700 Theobroma cacao HOM05D004793 ORTHO05D004423 1.5e-09 66.6 137 43.1
Ciclev10010582m.g Citrus clementina HOM05D004793 ORTHO05D004423 2.0e-09 66.2 125 39.2
CSS0021588 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 2.6e-09 65.9 129 40.3
Migut.M00035 Erythranthe guttata HOM05D004793 ORTHO05D004423 3.4e-09 65.5 127 40.9
Gorai.001G099200 Gossypium raimondii HOM05D004793 ORTHO05D004423 4.4e-09 65.1 128 43.8
Oeu057608.1 Olea europaea HOM05D004793 ORTHO05D004423 4.4e-09 65.1 128 41.4
Oeu064364.1 Olea europaea HOM05D004793 ORTHO05D004423 4.4e-09 65.1 128 41.4
Glyma.15G116700 Glycine max HOM05D004793 ORTHO05D004423 7.5e-09 64.3 138 37.0
Gohir.D07G092600 Gossypium hirsutum HOM05D004793 ORTHO05D004423 7.5e-09 64.3 128 43.8
Potri.006G016500 Populus trichocarpa HOM05D004793 ORTHO05D004423 9.9e-09 63.9 137 38.7
Cc09_g04750 Coffea canephora HOM05D004793 ORTHO05D004423 1.3e-08 63.5 131 35.9
Glyma.09G012000 Glycine max HOM05D004793 ORTHO05D004423 1.3e-08 63.5 143 37.1
Rhsim06G0174500 Rhododendron simsii HOM05D003210 ORTHO05D000001 1.3e-08 63.5 130 41.5
TPR.G10593 Trifolium pratense HOM05D004793 ORTHO05D004423 1.3e-08 63.5 149 37.6
CSS0022938 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 1.7e-08 63.2 129 40.3
Lalb_Chr15g0088081 Lupinus albus HOM05D004793 ORTHO05D004423 1.7e-08 63.2 141 36.2
CsaV3_7G023710 Cucumis sativus L. HOM05D004793 ORTHO05D004423 2.2e-08 62.8 92 45.7
Lsat_1_v5_gn_7_13860 Lactuca sativa HOM05D004793 ORTHO05D004423 2.2e-08 62.8 154 34.4
Lj6g0021600 Lotus japonicus HOM05D004793 ORTHO05D004423 2.9e-08 62.4 134 38.1
QL05p068371 Quercus lobata HOM05D004793 ORTHO05D004423 4.9e-08 61.6 136 38.2
QL05p068872 Quercus lobata HOM05D004793 ORTHO05D004423 4.9e-08 61.6 136 38.2
Eucgr.D01438 Eucalyptus grandis HOM05D004793 ORTHO05D004423 6.4e-08 61.2 141 38.3
CSS0019001 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 8.3e-08 60.8 134 40.3
Gohir.D06G161500 Gossypium hirsutum HOM05D004793 ORTHO05D004423 8.3e-08 60.8 152 36.8
Phvul.006G141500 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 8.3e-08 60.8 135 35.6
RcHm_v2.0_Chr5g0042781 Rosa chinensis HOM05D017646 ORTHO05D004423 8.3e-08 60.8 133 41.4
Gorai.010G188500 Gossypium raimondii HOM05D004793 ORTHO05D004423 1.1e-07 60.5 68 55.9
Psat1g178240 Pisum sativum HOM05D004793 ORTHO05D004423 1.4e-07 60.1 141 35.5
PGR004G1083 Punica granatum HOM05D004793 ORTHO05D004423 1.4e-07 60.1 141 39.0
Cc02_g34950 Coffea canephora HOM05D004793 ORTHO05D004423 1.9e-07 59.7 139 36.0
TPR.G6007 Trifolium pratense HOM05D004793 ORTHO05D004423 2.4e-07 59.3 151 37.1
DCAR_002230 Daucus carota HOM05D004793 ORTHO05D004423 3.2e-07 58.9 155 32.9
Oeu029974.1 Olea europaea HOM05D027131 ORTHO05D013900 3.2e-07 58.9 61 55.7
CAN.G294.21 Capsicum annuum HOM05D004793 ORTHO05D004423 5.4e-07 58.2 128 39.1
Duzib192G0740 Durio zibethinus HOM05D004793 ORTHO05D004423 5.4e-07 58.2 134 36.6
Lsat_1_v5_gn_7_95461 Lactuca sativa HOM05D004793 ORTHO05D004423 5.4e-07 58.2 120 41.7
Gohir.A06G155000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 7.1e-07 57.8 151 36.4
CANSAT56G2188 Cannabis sativa HOM05D004793 ORTHO05D004423 9.2e-07 57.4 159 34.0
CiPaw.09G105400 Carya illinoinensis HOM05D004793 ORTHO05D004423 9.2e-07 57.4 160 35.6
Rhsim13G0143200 Rhododendron simsii HOM05D004793 ORTHO05D004423 1.2e-06 57.0 140 36.4
Sed0024469 Sechium edule HOM05D004793 ORTHO05D004423 1.2e-06 57.0 126 36.5
Actinidia21442 Actinidia chinensis HOM05D004793 ORTHO05D004423 1.6e-06 56.6 91 46.2
CAN.G1397.7 Capsicum annuum HOM05D037802 ORTHO05D004423 1.6e-06 56.6 127 37.0
CARHR222830 Cardamine hirsuta HOM05D010379 ORTHO05D012419 2.1e-06 56.2 127 33.9
CiPaw.10G079700 Carya illinoinensis HOM05D004793 ORTHO05D004423 2.1e-06 56.2 139 35.3
Medtr2g026510 Medicago truncatula HOM05D004793 ORTHO05D004423 2.1e-06 56.2 148 37.8
Psat4g002280 Pisum sativum HOM05D004793 ORTHO05D004423 3.5e-06 55.5 137 38.0
Oeu063642.1 Olea europaea HOM05D004793 ORTHO05D004423 6.0e-06 54.7 128 35.2
Cc09_g00630 Coffea canephora HOM05D000222 ORTHO05D003997 7.8e-06 54.3 137 32.1


User provided reference genes

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