Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p022040 Quercus lobata HOM05D007170 ORTHO05D009243 6.0e-126 454.1 220 100.0
Cfa020492 Carpinus fangiana HOM05D007170 ORTHO05D009243 1.6e-54 216.9 204 59.3
Haze_09546 Corylus avellana HOM05D007170 ORTHO05D009243 2.1e-54 216.5 202 60.9
CiPaw.03G198500 Carya illinoinensis HOM05D007170 ORTHO05D009243 8.2e-51 204.5 124 79.8
FAN14G4936 Fragaria x ananassa HOM05D007170 ORTHO05D009243 1.2e-49 200.7 205 52.2
RcHm_v2.0_Chr2g0154431 Rosa chinensis HOM05D007170 ORTHO05D009243 3.5e-49 199.1 125 75.2
Prupe.3G191100 Prunus persica HOM05D007170 ORTHO05D009243 1.0e-48 197.6 205 51.7
CANSAT64G1590 Cannabis sativa HOM05D007170 ORTHO05D009243 1.7e-48 196.8 204 52.0
Dinv20277 Davidia involucrata HOM05D007170 ORTHO05D009243 8.5e-48 194.5 205 52.7
MD09G1135500 Malus domestica HOM05D007170 ORTHO05D009243 8.5e-48 194.5 205 51.2
Potri.006G023500 Populus trichocarpa HOM05D007170 ORTHO05D009243 4.2e-47 192.2 205 52.2
Sabra06G0017000 Salix brachista HOM05D007170 ORTHO05D009243 5.5e-47 191.8 205 52.7
FvH4_6g39900 Fragaria vesca HOM05D007170 ORTHO05D009243 7.2e-47 191.4 125 71.2
CSS0006494 Camellia sinensis var. sinensis HOM05D007170 ORTHO05D009243 3.6e-46 189.1 205 52.7
CSS0034103 Camellia sinensis var. sinensis HOM05D007170 ORTHO05D009243 3.6e-46 189.1 205 52.7
FAN02G4004 Fragaria x ananassa HOM05D007170 ORTHO05D009243 6.1e-46 188.3 125 71.2
TAR626G1158 Trochodendron aralioides HOM05D007170 ORTHO05D009243 5.2e-45 185.3 205 51.2
Gohir.A07G185500 Gossypium hirsutum HOM05D007170 ORTHO05D009243 8.8e-45 184.5 124 70.2
Gorai.001G214900 Gossypium raimondii HOM05D007170 ORTHO05D009243 8.8e-45 184.5 124 70.2
Thecc.01G177100 Theobroma cacao HOM05D007170 ORTHO05D009243 1.2e-44 184.1 204 52.0
Nn3g20634 Nelumbo nucifera HOM05D007170 ORTHO05D009243 2.0e-44 183.3 125 71.2
Actinidia06806 Actinidia chinensis HOM05D007170 ORTHO05D009243 2.6e-44 183.0 204 49.5
Duzib138G0290 Durio zibethinus HOM05D007170 ORTHO05D009243 2.6e-44 183.0 124 71.8
Atru.chr8.950 Acer truncatum HOM05D007170 ORTHO05D009243 3.3e-44 182.6 125 72.8
Ciclev10010909m.g Citrus clementina HOM05D007170 ORTHO05D009243 4.4e-44 182.2 124 71.8
Lj7A482G28 Lonicera japonica HOM05D007170 ORTHO05D009243 4.4e-44 182.2 125 72.8
Eucgr.A00891 Eucalyptus grandis HOM05D007170 ORTHO05D009243 9.7e-44 181.0 204 48.5
Gohir.D07G192100 Gossypium hirsutum HOM05D007170 ORTHO05D009243 9.7e-44 181.0 124 69.4
Cc02_g31000 Coffea canephora HOM05D007170 ORTHO05D009243 2.2e-43 179.9 127 70.1
MBI02_g15149_MAGBIO Magnolia biondii HOM05D007170 ORTHO05D009243 2.8e-43 179.5 122 73.0
Cpa.g.sc8.300 Carica papaya HOM05D007170 ORTHO05D009243 6.3e-43 178.3 124 71.0
Manes.09G075018 Manihot esculenta HOM05D007170 ORTHO05D009243 1.8e-42 176.8 125 68.0
DCAR_006644 Daucus carota HOM05D007170 ORTHO05D009243 2.4e-42 176.4 126 69.0
HanXRQChr10g0314771 Helianthus annuus HOM05D007170 ORTHO05D009243 4.1e-42 175.6 212 49.1
Peaxi162Scf00647g00012 Petunia axillaris HOM05D007170 ORTHO05D009243 4.1e-42 175.6 205 48.3
Nitab4.5_0002247g0080 Nicotiana tabacum HOM05D007170 ORTHO05D009243 9.1e-42 174.5 133 66.2
PGR031G3275 Punica granatum HOM05D007170 ORTHO05D009243 9.1e-42 174.5 204 48.5
AL7G40850 Arabidopsis lyrata HOM05D007170 ORTHO05D009243 1.2e-41 174.1 131 62.6
Nitab4.5_0005905g0020 Nicotiana tabacum HOM05D007170 ORTHO05D009243 2.7e-41 172.9 138 60.9
Aqoxy3G00362 Aquilegia oxysepala HOM05D007170 ORTHO05D009243 3.5e-41 172.6 204 47.1
Sopen01g040790 Solanum pennellii HOM05D007170 ORTHO05D009243 7.7e-41 171.4 125 65.6
A08p11580 Brassica napus HOM05D007170 ORTHO05D009243 1.0e-40 171.0 204 46.1
BcaB04g18275 Brassica carinata HOM05D007170 ORTHO05D009243 1.7e-40 170.2 124 62.9
BcaC07g37864 Brassica carinata HOM05D007170 ORTHO05D009243 1.7e-40 170.2 204 45.6
BolC8t48255H Brassica oleracea HOM05D007170 ORTHO05D009243 1.7e-40 170.2 204 45.6
CSS0002264 Camellia sinensis var. sinensis HOM05D007170 ORTHO05D009243 1.7e-40 170.2 191 50.3
AT4G14970 Arabidopsis thaliana HOM05D007170 ORTHO05D009243 2.2e-40 169.9 131 61.1
Oeu038464.1 Olea europaea HOM05D007170 ORTHO05D009243 2.2e-40 169.9 218 47.7
ECA238G4341 Erigeron canadensis HOM05D007170 ORTHO05D009243 2.9e-40 169.5 132 65.9
SalBow8G4071 Salvia bowleyana HOM05D007170 ORTHO05D009243 2.9e-40 169.5 205 48.3
Solyc01g097110.2 Solanum lycopersicum HOM05D007170 ORTHO05D009243 5.0e-40 168.7 125 64.8
Lsat_1_v5_gn_2_66140 Lactuca sativa HOM05D007170 ORTHO05D009243 6.5e-40 168.3 127 68.5
Thhalv10024215m.g Eutrema salsugineum HOM05D007170 ORTHO05D009243 8.5e-40 167.9 204 46.1
BraA08t33150Z Brassica rapa HOM05D007170 ORTHO05D009243 1.5e-39 167.2 204 45.6
Sc07g0002130 Simmondsia chinensis HOM05D007170 ORTHO05D009243 2.5e-39 166.4 125 65.6
Migut.B01114 Erythranthe guttata HOM05D007170 ORTHO05D009243 3.6e-38 162.5 125 64.0
PSO541G2476 Papaver somniferum HOM05D007170 ORTHO05D009243 2.2e-35 153.3 206 43.7
CARHR221640 Cardamine hirsuta HOM05D007170 ORTHO05D009243 1.1e-34 151.0 187 44.4
ATR1098G002 Amborella trichopoda HOM05D007170 ORTHO05D009243 1.8e-34 150.2 127 60.6
PSO675G2674 Papaver somniferum HOM05D007170 ORTHO05D009243 1.8e-34 150.2 211 42.2
SGA_v2.0_scaffold172G38980 Striga asiatica HOM05D007170 ORTHO05D009243 9.1e-34 147.9 128 57.8
Os07g0154400 Oryza sativa ssp. japonica HOM05D007170 ORTHO05D009243 1.6e-33 147.1 134 58.2
HPP92_019550 Vanilla planifolia HOM05D007170 ORTHO05D009243 1.7e-32 143.7 126 56.3
Zm00001eb117500 Zea mays HOM05D007170 ORTHO05D009243 7.2e-31 138.3 135 56.3
GSVIVG01020797001 Vitis vinifera HOM05D007170 ORTHO05D009243 6.1e-30 135.2 111 61.3
SEGI_23823 Sequoiadendron giganteum HOM05D007170 ORTHO05D009243 9.8e-28 127.9 127 48.8
Pp3c3_20180 Physcomitrium patens HOM05D007170 ORTHO05D009243 2.9e-24 116.3 115 50.4
Mapoly0001s0378 Marchantia polymorpha HOM05D007170 ORTHO05D009243 1.5e-23 114.0 127 46.5
AagrBONN_evm.TU.Sc2ySwM_344.1322 Anthoceros agrestis HOM05D007170 ORTHO05D009243 3.0e-21 106.3 106 47.2
CBR_g3147 Chara braunii HOM05D007170 ORTHO05D009243 1.5e-15 87.4 122 37.7


User provided reference genes

Program Settings