Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 4.4e-164 581.3 300 100.0
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 2.9e-163 578.6 300 99.7
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 3.6e-150 535.0 298 94.0
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 5.8e-148 527.7 301 90.4
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 2.4e-146 522.3 300 88.0
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 4.1e-146 521.5 296 86.8
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 7.1e-146 520.8 299 86.6
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 1.2e-145 520.0 299 86.6
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 3.5e-145 518.5 296 90.2
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 3.5e-145 518.5 295 88.1
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 4.6e-145 518.1 297 90.6
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 6.0e-145 517.7 296 89.9
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 7.8e-145 517.3 298 88.9
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.0e-144 516.9 296 89.9
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 1.3e-144 516.5 296 86.5
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 1.7e-144 516.2 298 88.3
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 1.7e-144 516.2 300 88.7
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 2.3e-144 515.8 296 89.5
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 2.3e-144 515.8 296 87.2
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 1.1e-143 513.5 279 92.5
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 2.5e-143 512.3 296 87.8
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 4.3e-143 511.5 279 88.5
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.2e-142 510.0 279 88.2
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 1.2e-142 510.0 295 87.5
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 1.6e-142 509.6 281 89.3
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 2.1e-142 509.2 295 86.4
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 2.1e-142 509.2 292 87.7
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 2.1e-142 509.2 298 85.9
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 2.1e-142 509.2 279 91.4
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 2.1e-142 509.2 296 84.5
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 2.8e-142 508.8 296 86.8
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 3.6e-142 508.4 301 86.4
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 4.7e-142 508.1 296 85.5
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 6.2e-142 507.7 296 84.5
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 6.2e-142 507.7 281 89.7
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 6.2e-142 507.7 281 88.3
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 8.1e-142 507.3 296 87.2
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 1.1e-141 506.9 296 86.1
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 1.4e-141 506.5 296 85.8
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 1.8e-141 506.1 296 86.5
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 1.8e-141 506.1 296 85.1
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 2.4e-141 505.8 296 84.5
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 3.1e-141 505.4 278 88.5
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 3.1e-141 505.4 278 88.5
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 3.1e-141 505.4 278 88.5
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 3.1e-141 505.4 278 88.5
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 3.1e-141 505.4 278 88.5
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 5.2e-141 504.6 284 87.7
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 6.8e-141 504.2 296 84.1
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 8.9e-141 503.8 298 87.6
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 1.2e-140 503.4 298 85.6
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 2.0e-140 502.7 296 85.8
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 2.6e-140 502.3 296 86.8
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 2.6e-140 502.3 301 85.4
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 3.4e-140 501.9 296 84.1
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 3.4e-140 501.9 296 83.4
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 4.4e-140 501.5 300 85.7
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 4.4e-140 501.5 296 84.1
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 5.8e-140 501.1 294 84.0
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 7.6e-140 500.7 278 87.4
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 9.9e-140 500.4 295 85.1
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 9.9e-140 500.4 280 88.6
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 9.9e-140 500.4 298 87.9
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 1.3e-139 500.0 279 87.5
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.7e-139 499.6 296 84.5
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 2.9e-139 498.8 285 87.7
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 2.9e-139 498.8 301 85.4
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 3.8e-139 498.4 296 85.8
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 3.8e-139 498.4 292 89.4
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 4.9e-139 498.0 281 87.5
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 6.4e-139 497.7 296 84.1
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 7.1e-138 494.2 291 84.5
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 9.3e-138 493.8 281 86.8
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 9.3e-138 493.8 274 87.6
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 1.2e-137 493.4 296 82.1
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.2e-137 493.4 281 87.2
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.6e-137 493.0 279 86.7
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 2.1e-137 492.7 296 85.1
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 2.1e-137 492.7 297 84.5
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 2.7e-137 492.3 298 84.9
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 3.0e-136 488.8 281 85.8
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 3.9e-136 488.4 308 81.2
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 5.1e-136 488.0 296 83.8
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 8.7e-136 487.3 298 85.2
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 1.9e-135 486.1 298 81.2
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 1.9e-135 486.1 281 85.1
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 5.6e-135 484.6 280 86.4
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 7.3e-135 484.2 281 85.1
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 9.6e-135 483.8 297 81.8
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 3.6e-134 481.9 297 81.5
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 4.8e-134 481.5 264 88.6
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 1.1e-133 480.3 296 82.1
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 1.8e-133 479.6 309 79.9
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 4.4e-132 474.9 298 80.2
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.2e-131 472.6 296 80.1
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 6.4e-131 471.1 382 70.9
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 1.4e-130 469.9 279 86.4
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 1.9e-130 469.5 279 84.2
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 1.9e-130 469.5 278 83.8
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 2.4e-130 469.2 297 79.8
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 3.2e-130 468.8 302 78.1
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 4.2e-130 468.4 279 83.2
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 7.1e-130 467.6 280 83.6
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 2.1e-129 466.1 300 76.7
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 1.3e-128 463.4 295 79.0
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 1.3e-128 463.4 295 79.7
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 1.1e-127 460.3 281 82.2
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 7.3e-127 457.6 280 81.4
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 2.1e-126 456.1 282 81.6
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 3.6e-126 455.3 283 81.3
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 4.8e-126 454.9 282 81.9
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 1.1e-125 453.8 325 75.4
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.4e-125 453.4 272 83.8
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 2.4e-125 452.6 302 77.2
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 6.9e-125 451.1 279 79.6
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 2.0e-124 449.5 287 78.0
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 1.3e-123 446.8 294 76.5
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.1e-122 443.7 281 79.0
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.9e-122 443.0 265 86.0
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 5.5e-122 441.4 292 75.3
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 2.7e-121 439.1 252 84.5
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 1.5e-119 433.3 289 76.5
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 3.7e-118 428.7 262 82.1
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 4.0e-117 425.2 220 95.0
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 1.2e-113 413.7 220 90.5
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 1.1e-111 407.1 279 75.3
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 1.5e-111 406.8 272 76.5
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 4.3e-111 405.2 217 90.8
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 4.3e-111 405.2 217 90.8
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 8.2e-110 401.0 276 70.7
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 3.2e-106 389.0 249 75.1
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 7.9e-105 384.4 250 74.4
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 1.8e-104 383.3 253 71.5
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 3.3e-103 379.0 226 85.4
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.7e-102 375.6 306 67.3
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 6.9e-101 371.3 199 91.0
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 7.2e-98 361.3 251 68.9
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 3.0e-96 355.9 215 83.7
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 4.1e-93 345.5 181 94.5
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 4.5e-92 342.0 181 92.3
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 3.6e-89 332.4 208 81.2
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 3.5e-84 315.8 173 90.2
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 9.4e-82 307.8 220 76.4
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 1.0e-80 304.3 198 76.8
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 1.2e-73 280.8 152 90.8
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 2.5e-66 256.5 194 67.5
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 8.8e-64 248.1 146 84.2
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 7.0e-61 238.4 209 63.6
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 3.1e-48 196.4 119 76.5
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 3.4e-47 193.0 236 47.9
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 1.9e-45 187.2 158 63.9
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 7.0e-45 185.3 178 60.1
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 9.2e-45 184.9 136 72.1
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 9.5e-42 174.9 105 78.1
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 1.9e-37 160.6 86 87.2
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 4.6e-36 156.0 96 76.0
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 9.9e-31 138.3 88 76.1
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 1.9e-29 134.0 196 45.4
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 2.4e-29 133.7 305 32.5
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 4.1e-29 132.9 96 71.9
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 4.3e-26 122.9 66 92.4
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 4.3e-26 122.9 66 92.4
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 1.4e-24 117.9 170 42.4
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 7.8e-20 102.1 62 83.9
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 7.8e-20 102.1 62 83.9
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 2.4e-16 90.5 53 77.4
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 2.4e-16 90.5 157 39.5
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-15 86.7 84 54.8
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 2.9e-14 83.6 79 54.4
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 1.4e-13 81.3 76 71.1
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 2.7e-12 77.0 92 48.9
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 3.9e-11 73.2 103 43.7
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 3.9e-11 73.2 59 62.7
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 1.1e-10 71.6 110 40.9
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.5e-10 71.2 62 59.7
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 3.6e-09 66.6 43 79.1
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 6.9e-08 62.4 57 50.9
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.5e-07 61.2 34 82.4
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 2.0e-07 60.8 42 73.8
Lj2g0024488 Lotus japonicus HOM05D003815 ORTHO05D004580 1.7e-06 57.8 38 73.7
MCO17G054 Micromonas commoda HOM05D003815 ORTHO05D270498 8.4e-06 55.5 67 38.8


User provided reference genes

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