Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 1.4e-301 1038.9 538 100.0
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 4.7e-249 864.4 540 83.9
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 6.3e-246 854.0 556 82.9
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 1.6e-236 822.8 544 79.2
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 5.0e-235 817.8 543 78.3
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 4.9e-230 801.2 546 78.2
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 6.3e-230 800.8 527 80.6
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 1.6e-228 796.2 549 76.5
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 2.7e-228 795.4 547 78.2
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 2.7e-228 795.4 540 77.6
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 5.9e-228 794.3 532 78.6
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 7.3e-226 787.3 540 76.7
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 8.0e-225 783.9 547 76.1
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 4.0e-224 781.6 496 80.4
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 8.9e-224 780.4 549 75.2
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 5.8e-223 777.7 544 75.4
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 2.2e-222 775.8 548 75.7
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 9.2e-221 770.4 542 74.7
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 9.2e-221 770.4 553 74.3
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 1.3e-219 766.5 470 81.9
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 5.0e-219 764.6 543 74.2
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 8.6e-219 763.8 545 75.0
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 3.3e-218 761.9 544 73.5
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 4.3e-218 761.5 549 72.5
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 4.3e-218 761.5 549 72.3
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 1.2e-217 760.0 549 72.3
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 1.2e-217 760.0 538 74.5
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 4.7e-217 758.1 547 73.3
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 4.0e-216 755.0 549 71.9
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 8.9e-216 753.8 544 74.1
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.0e-215 752.7 542 74.0
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 2.0e-215 752.7 547 73.7
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 7.5e-215 750.7 541 72.8
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 9.8e-215 750.4 485 78.4
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 6.4e-214 747.7 542 73.2
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 1.9e-213 746.1 552 72.5
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 3.2e-213 745.3 563 70.2
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 3.2e-213 745.3 542 73.4
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 4.1e-213 745.0 541 73.4
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 8.6e-211 737.3 538 71.0
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 7.3e-210 734.2 573 70.0
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 6.2e-209 731.1 518 74.7
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 1.2e-207 726.9 547 71.5
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 4.4e-207 724.9 531 70.4
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 1.7e-206 723.0 493 74.6
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 8.3e-206 720.7 481 76.3
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 7.1e-205 717.6 529 71.1
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 3.5e-204 715.3 490 73.5
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 1.3e-203 713.4 538 67.7
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 1.7e-203 713.0 503 72.0
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 5.1e-203 711.4 467 76.4
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 6.6e-203 711.1 547 69.5
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 7.3e-202 707.6 544 68.8
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.2e-201 706.8 481 73.6
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 2.1e-201 706.1 538 66.4
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 2.1e-201 706.1 459 75.2
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 2.8e-201 705.7 550 66.5
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 6.2e-201 704.5 458 76.4
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 2.0e-199 699.5 440 79.1
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 2.6e-199 699.1 539 67.0
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 7.6e-199 697.6 542 68.6
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 1.3e-198 696.8 527 67.9
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 1.3e-198 696.8 527 67.7
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.4e-197 693.3 542 69.6
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 1.4e-197 693.3 552 68.3
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 9.2e-197 690.6 439 78.6
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 2.3e-195 686.0 539 66.0
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 8.7e-195 684.1 511 67.1
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 1.5e-194 683.3 471 71.1
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 8.1e-193 677.6 550 64.4
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 1.1e-192 677.2 475 69.1
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 1.8e-192 676.4 544 64.9
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 9.0e-192 674.1 527 67.2
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 1.2e-191 673.7 550 63.6
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 2.0e-191 672.9 548 63.9
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 2.0e-191 672.9 558 62.9
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 2.0e-191 672.9 471 70.3
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 5.8e-191 671.4 498 68.1
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 7.6e-191 671.0 488 68.0
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 1.3e-190 670.2 546 64.1
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 2.2e-190 669.5 470 72.8
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 8.4e-190 667.5 474 69.2
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 9.3e-189 664.1 458 72.7
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 1.6e-188 663.3 549 64.5
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 1.7e-187 659.8 549 64.1
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 4.6e-180 635.2 542 63.3
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 6.7e-179 631.3 452 68.4
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 3.3e-178 629.0 452 68.1
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 5.6e-178 628.2 525 62.5
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 1.1e-176 624.0 440 70.7
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 4.0e-176 622.1 542 61.1
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 5.1e-171 605.1 476 64.3
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 1.0e-163 580.9 542 57.0
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 3.8e-158 562.4 452 60.8
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 1.1e-157 560.8 489 61.6
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 2.5e-157 559.7 492 63.0
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 3.1e-152 542.7 372 74.2
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 1.5e-151 540.4 532 57.3
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 6.7e-147 525.0 383 71.8
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 1.8e-144 516.9 388 64.4
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 2.1e-140 503.4 472 51.9
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 2.6e-138 496.5 430 61.4
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 4.4e-130 469.2 466 49.8
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.7e-129 467.2 449 61.7
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 4.8e-129 465.7 488 49.2
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 1.6e-127 460.7 470 49.1
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 1.2e-124 451.1 455 49.9
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 4.5e-119 432.6 477 46.8
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 5.9e-111 405.6 439 46.0
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 2.9e-73 280.4 488 33.6
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 2.7e-63 247.3 424 33.3
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 1.0e-57 228.8 387 42.6
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 6.0e-55 219.5 134 78.4
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 7.9e-55 219.2 137 78.1
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 8.7e-46 189.1 138 70.3
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 1.5e-42 178.3 278 42.1
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 2.2e-41 174.5 107 84.1
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 4.5e-34 150.2 471 25.9
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 1.2e-31 142.1 92 75.0
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 1.8e-30 138.3 94 77.7
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 2.9e-25 120.9 113 63.7
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 3.6e-23 114.0 68 83.8
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 2.3e-22 111.3 223 35.0
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 1.5e-21 108.6 195 34.9
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 1.3e-20 105.5 220 32.3
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 1.7e-20 105.1 120 55.0
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 3.6e-15 87.4 80 62.5
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 4.1e-11 73.9 53 67.9
BolC9t57452H Brassica oleracea HOM05D006019 ORTHO05D000049 6.1e-07 60.1 61 54.1
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 8.8e-06 56.2 322 22.7


User provided reference genes

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